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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0001024_pilon:556..6572- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044312 ID=XLOC_044312|Name=XLOC_044312|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6017bp|location=Sequence derived from alignment at sc0001024_pilon:556..6572- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTCGATGTTAGATAGTTATAAAGAAGATATCTTCGAAAGCTCCTA
CGACAAAAATGACGGTAGGCAATGTCTTATTACTTTTTAACAAACGTAAA
CAAGGGTCGAGGCCTTTAACATTTATGAATATAGAAGATGAACAAGCCGG
AACGCTGATTGGATCTACCTGATGATTAAAGTTAGAGCAAGTGGGGAAGT
GTAATATAGTCGAGTGCTGGAACGCCAAGGGTATAATCAGTAATTGTTCG
AGCTACTGAAATTCGAGTTATAGAGGCAGAATAGCCTAAGAATCAAGAGA
CCGGAAATTCGTTCGAGTTTATGAAGATAATCGAGTTGAGGAGGTTCGAG
TTATGAAAAGTCGACTGTAGTTTAAGGCGATAATGGAAAGGATCGTGAAA
AAACAACGATCAGTTTTATTGACAATTGAATCATGCTTGATGATGGGCAT
TGTTTGAATAATATATTTATGAGAAAAAACAAAGAAATACTAGGAAAAAG
TCCAAAGGAAATCTGCAAAAACGGCGTTTTCCGGCACACTTCTAAAATCA
GGCTCCGTCACATTTTAGATATTGCTACTTTACACCAGTGTGCAAAATTT
CATAAAAATATAAAAAGTACATCTACTCGAGAAATTCAAGTGAAACCGTT
TTTCCGGCGATTCTAGACTGTTCCTGCGATTTTTAGAAAGTTCTGGCTTC
AAAAATCAGTTTTATTGACAATTGAATCATGCTTGATGGTGGGCATTGCT
ATAAATAAGGTTTTGAACAAAGAAATATTAGGAAAAAGTCTAATGAAAAT
CAGCAAAAACGGCGATTTCCGGCAAAACGAACGAACGAACGAACGAACTA
ATTTATAGGACCTCCATGTAGGTCCAAAAGTAAAAGAATCCAATTCTTGG
AAACACGCTTTAAGTTATAGAAAGTCATCGCTGTTAAAATTTTAAACATT
TGTCTTGGTTTTTGTTAAACGTCTTTAAGATTATCTTATAAAGTGACCTG
TATTAAAAGTTACAGCTACTGTCTGTCTCCGATACTTATTATTTTGAGCC
ACATTTTTAATTAGCCTTACACATACGGAATCAGTATTACATGCCAATAA
AGGAGAGATGAATTCAAAAAGTCAAAAAGTTTTGAAAATTACAACCAGTG
GAAAGTTGCATGAATTTGAGTCCTTTTCTATTCCCTAGAAGTTACTCGAA
GTTAACTTATTTGTGAGCAGCGTTTGAGCGCATGGAAGAAGCACGTTATA
TCTCTATAGAAACACTAATGAGCTTATAAAATTCAATAAATCCTCATCAT
GGTATTCTTCAGACGTGTTGATAAAGATATCAGATTCATAATCTTTCACT
CTTGTTTTTAAAGAAAATTCATGCGTGCGTGCTACTTTGCTAAAATTGTA
AGAAAAAGAATTTAAGGCTGCCAAAGTGTCAAAATTACTTAGGAATATTA
TTTTGTAGTAAAGAAACTGAATTTCATAATTATCAGGGGTGATACTTTAC
AAACAAGATATTAAAAACTTTTAACAAGAAGCATAAATTTTGATAATAGT
TTTGCTGGTTCTGTGAGTACCCTATTTTGGACTTCCCGCCTTGCGCTTTC
GATGTATAAACTCACGACGAAACTTCTAGTGGAAAGACTGAGGAGGAGGA
GGCTTTACACTTTCAAGCAGCTAATATTATCTGAAGATTGATATATAATA
CTCTTTTCAGAGAATTCAACTCTATGGTTATCTAGATAGGGCCTTTAAAA
TTTTGATGCACCTGACATTGCACCTCAGGCTTTACTCAAGAGTGCAGAAT
TGGTAAACAAAAGGGAGCTCGAATTTATATATTTATATATTTGAAGGAAA
ATTGAATTTTTTAGCTAAGTGGAAAATAAATACAGCTAGATGAAGATTAA
ATATTGAGAACAAAGTGTAAAATCTCTATCAAGAATACACGTTTTTTTAA
AGCACATTCAAAATTTCTGAGACCTTCAGATGTTCTTAACGTATTGTATT
TTAAGCATAAATATGTTCTTAAAATGTTCTTATTTTCACCTTTTTCTGAG
TATTTTTGCCCAATACCTTACAAGCAATAGGGTGGTTTCAGTCCGCAACG
CCTGTTAAAATGTTCTTAATTTGTTCTTAATATTTTGCCCACCGAAGCCT
TATGTTCTCATATAGTTTGTTCTCATAAAAAAACGTGTAACACTTATGAA
AAACGGTGGAATTTTTCACTCAATTTTCAAATTATCATATAACACGAGAC
CAAAAAGATGATCAGCTTTATAAAACATCGGTTAGACCAATATTTTATAT
AATTTTTTTCATAAAACGTTTCTCATTCATTTGGCTCTCGTGAATTTAAT
CTGTCTAATATGTTTGAGCGGTTTTAAAGTGATTTATTTTTGATTTATTA
TAACGACTTTTAGGTCACACAAATCTTAAAAGAAAGTTTTGAGACAAAAT
AAGGAAGGATTTTCTTTTCAACTTAACAGACACAGAGCTTCTTAGACCTC
GTGTGTCGAGCAGAGATTTAAAATTCATGTTATATCAGGTTTTCACTTGA
TATCTGGTATTCTGATATTATCGGCGTTAGATGGACGACTTTGTTTTGAC
GTCTTTTGTCCAGAATCATTTTATAATTATGAGCTTCAGGGTTCAGATTA
AAGGGAGGGGATAAGTAAATGGCGGAGGCGGGTCTTTAATAATGTATGGT
TCAGCATAGATGTTATGCAATGAATATGTATATATTATGAATATTCGTCG
TTGGATTAGAATTATTGTTTTAAAGAAATTCACGCGAGACACTCTGAAGA
TCTTTCTTTAAAAAAAGAACTTTTGCGATAAGCAGTGTAACTATTTTTTC
GACTAGATTCGATTACCTCGAGATTTAATTGGTTCGATTCGATCGAACAT
CGATTAAATTCAATCAAAATAATAGAATAAGTTGGATCGAGTTCCTTTTA
ATCGATTCTTTTCGATTATTACTGAGTCGATTGACATTAAAGTTCGATCG
CTTCGCTCGACATTTCCTGGTACAGTACTAAATGTGTACGGTTGTTATAA
ATATAGAAAGTTTATCACCAGATATGGAGAATTGTCACCTGCACCCGACT
GTCTGTTGGAAGCATTACGTAATGGTTTTTTTCCAAACCTTTATTACACT
TAGAATTTCATTTGACTTTTAGAAATGACAACAAGTTCATTGGAGCCAAC
GAACGGTGGGCCGCTAAATAACACGTCATACAATTCTTATGTTGACTTGT
TCTCATGTGCAAGCTTAAGAATAGCTGAGGATGATTGGAATAGCCTGGTC
AATTCAGGTAAATCAATACTTATAGTCTTTTTGATTTTTTTTATCTTTTC
AGACTAAAAATTTTTTCCAAAAAAAGTCAAAAACCTGATTAAATAGCGTT
TTATGATTTCAAGTTTCAGATGAGATGAAGTTTTTATATAATACTTTTTA
ATAATTGGTCATTTGAAGTAATAAAAATGACGCGTTCTTTAGAAAAAGTA
ACAAAATTCTTTTATTACTGGTTAACGACCAACCAAATCAAATAAGAGCT
TGTAAAAACTCCATCTCGTCCCTGAAGTTTAGAAGGTGCAACATTCTCCT
TCCCCTCACTTTAAACGGTCACCGGGACCCATCCCATCCCCATCCCGACT
CAGAAGGGTGTACAGAGGTCATTTGAATTTTGACAGAAAAGCAAAATAAA
AGGACAACTCATGCCCAAAATACTGTGTATAATATAAAGTCAAAGCTTTC
AAAAATCTCGCCGCCCGTAAAATCGTTGTCATCGATGAAGATTTCTCTGT
CAGTCTGTGCCACTAACCTGCACTAACTCGATCGGGAAGATTCTTCCGAA
ATGGGAAAATTCTTCCGAAATGGGAAGAACCTTCCCGAACGGGAAATTAA
CTTGACACCCAAATGGGTAAGAGTTAAAAAACGGACTTCCAGATCAGGAA
GAAGCGGGAAAATAAGGAAAACTCGATCGGGTTGGAACTACCCGTTTGGG
AAGCTTACGCAGTTTTTTTCACAATTTAACAAGATTTCCACGGTAAAGTT
TATTTTTCTTTTGGTGAAAATCCTTAAAATTTGATGCTATTTCACCTCCA
AAAAGTTTCAACTTTCGCCGGTCATCGTACAGCTTCGCCGAAGATTCAGT
CAATTTTCAACTTCCCAAAGAAGAAGAATCTTCCCAAACGGGTAGAAAAA
AATAGAGTAAGTTCTTCCCGTTTGGGAAAGTTCTTCCCATTTCGGAAGAA
TCTTCCCGATCGAGTTAGTGGCACAGTAATCTCTGTAATGTAAGGAAATA
TCACTACACTGCCTATAAAATGACTTATTTGCTTGCTTTACAGACGTCAA
ACTTGCGGTACAAGTTGGACTTTTATTGCTGAGGAACAACAAAGAATTGG
AAACAGTTTTAGAAGTCACAGAGAAACAGTTTGAAGAACAGAAATTGAGA
GCTGATGTAAGAAATATGCTTTATTGTTAAATCTTTTGGTTAAATCTAGT
GACAGTGAGTCCTTTCATTGAAACAATGACTTTATAACTCACATAAGTAC
AGTATATACAGCCGATAATACGACACGGCTAAAATCCTCAAAATTATTTA
CTTATTTATGACGTATTAAAAAAGGGAGCTACGTAAAAATATAAATCTGA
TTTCCAAATTCTGATTCCCGTATTCACGTATTCGGGACTTGAGTCAAGTA
AGTAAGTCTGCGACCGCAGTCGGAGGCGACCCGAAGGCTCCTCTTTCGAT
AGCTATCCACCCGAAGGTAGGGGAGGGCGCCACTCTTTCTCCCTGGATTT
CTCCACTTACCCTTGATCCTTCTCTTAGTTGCTGAGCATCAAGCAGAGAG
GCATAAAGTACCATTTTGGGAATCTTTGGTATGACCCCGGCTGGGGGTTG
AACCCACAACCTTGCGAACCGTAGCCGGATGCTCCACCATTGTACTACGG
TCGCTTGAGTCAAACTCGAACTCGAACCCAGTCCTTTTGTACGCTTTTTC
ATGATTTTGATAGCGCTCACAAAAGGTTGTATCACGTCCATTAGTAAAAT
CAAAAATGGCTCTGGGTGAAACCAAAATGTGGTGCAAGTAGCTCTGGGTA
CGAGATTGGACTTTAATGATATAATTTCTGTTCTAAAGACAAATATCAGA
ATCCCCTGTCAACAAATATTTTATAAGTATCAACATACCTGGTGATCTTT
AGTATTTGGGTGCAACCAACTTTTATTTCAAACCCAACAAAAGCTTGCTC
TGTAGTTCCTTTCTTTTCATCCCAAATGATAATGGATCATCAGATATCAA
TTCAATAATTTTATTTTTATTTTAACAAATTTTTATTAGTTAGAGCACTG
AAAAATAGAAAATAAAATGATAAGATTTTAACATTTAACTCCTTTTCAGC
ATTATGAGAACCAAGTCAAGAATTTGAACGAGTTATTGAATCAACAAACA
GACGTATATTCATCCCTAGAGACACAAATTCTAGACCTCTCAAATAAATA
TAAACAGTTACTGGATGATTGTGGGATTTACAAGAAAAAGAATATCACCC
TGTGGAGGAGAGTGGAGTGGCTTGAAAAAGAGTGCGAAGAATATTTAGAA
GAAATTTCATTCCTGAAAAAGGAAGACACAAACTCCATCGCGGAGGAGAG
CTTAGAGTGTCTCGATGACCGCACTCCTCCTTCGTTTGAAAACTCAGATA
AAGTAGATACTAAACTGCTAAATCGCTTTGAATCGATTCTTGAAGAAAAC
GACTTATTAAAAGAACGAATTTTGGATTTGGAGCATGATAATTCAATATT
AGAGGAGGCGATACAAAGGTTCGATAAAAATTCATCTGAGACAGGAGAAA
CAAAATTATCGAGTGTAGAAACTTTTTATTATGCATCGCCTGAAAAGAAT
TTAGCTGTAGAAATAAATTCACAGTCTGGTGTGAAAGCGACACCAACTTT
ACAGCATTATCATGAACTTTTTGCTGAGATTTTCCAGAAAATCAAAATGA
CACGAGATGGTACATGA Coding sequence (CDS) from alignment at sc0001024_pilon:556..6572- >XLOC_044312 ID=XLOC_044312|Name=XLOC_044312|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1860bp|location=Sequence derived from alignment at sc0001024_pilon:556..6572- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTCGATGTTAGATAGTTATAAAGAAGATATCTTCGAAAGCTCCTA
CGACAAAAATGACGATGACTTCGATGTTAGATAGTTATAAAGAAGATATC
TTCGAAAGCTCCTACGACAAAAATGACGAAATGACAACAAGTTCATTGGA
GCCAACGAACGGTGGGCCGCTAAATAACACGTCATACAATTCTTATGTTG
ACTTGTTCTCATGTGCAAGCTTAAGAATAGCTGAGGATGATTGGAATAGC
CTGGTCAATTCAGAAATGACAACAAGTTCATTGGAGCCAACGAACGGTGG
GCCGCTAAATAACACGTCATACAATTCTTATGTTGACTTGTTCTCATGTG
CAAGCTTAAGAATAGCTGAGGATGATTGGAATAGCCTGGTCAATTCAGAC
GTCAAACTTGCGGTACAAGTTGGACTTTTATTGCTGAGGAACAACAAAGA
ATTGGAAACAGTTTTAGAAGTCACAGAGAAACAGTTTGAAGAACAGAAAT
TGAGAGCTGATACGTCAAACTTGCGGTACAAGTTGGACTTTTATTGCTGA
GGAACAACAAAGAATTGGAAACAGTTTTAGAAGTCACAGAGAAACAGTTT
GAAGAACAGAAATTGAGAGCTGATCATTATGAGAACCAAGTCAAGAATTT
GAACGAGTTATTGAATCAACAAACAGACGTATATTCATCCCTAGAGACAC
AAATTCTAGACCTCTCAAATAAATATAAACAGTTACTGGATGATTGTGGG
ATTTACAAGAAAAAGAATATCACCCTGTGGAGGAGAGTGGAGTGGCTTGA
AAAAGAGTGCGAAGAATATTTAGAAGAAATTTCATTCCTGAAAAAGGAAG
ACACAAACTCCATCGCGGAGGAGAGCTTAGAGTGTCTCGATGACCGCACT
CCTCCTTCGTTTGAAAACTCAGATAAAGTAGATACTAAACTGCTAAATCG
CTTTGAATCGATTCTTGAAGAAAACGACTTATTAAAAGAACGAATTTTGG
ATTTGGAGCATGATAATTCAATATTAGAGGAGGCGATACAAAGGTTCGAT
AAAAATTCATCTGAGACAGGAGAAACAAAATTATCGAGTGTAGAAACTTT
TTATTATGCATCGCCTGAAAAGAATTTAGCTGTAGAAATAAATTCACAGT
CTGGTGTGAAAGCGACACCAACTTTACAGCATTATCATGAACTTTTTGCT
GAGATTTTCCAGAAAATCAAAATGACACGAGATGGTACATGACATTATGA
GAACCAAGTCAAGAATTTGAACGAGTTATTGAATCAACAAACAGACGTAT
ATTCATCCCTAGAGACACAAATTCTAGACCTCTCAAATAAATATAAACAG
TTACTGGATGATTGTGGGATTTACAAGAAAAAGAATATCACCCTGTGGAG
GAGAGTGGAGTGGCTTGAAAAAGAGTGCGAAGAATATTTAGAAGAAATTT
CATTCCTGAAAAAGGAAGACACAAACTCCATCGCGGAGGAGAGCTTAGAG
TGTCTCGATGACCGCACTCCTCCTTCGTTTGAAAACTCAGATAAAGTAGA
TACTAAACTGCTAAATCGCTTTGAATCGATTCTTGAAGAAAACGACTTAT
TAAAAGAACGAATTTTGGATTTGGAGCATGATAATTCAATATTAGAGGAG
GCGATACAAAGGTTCGATAAAAATTCATCTGAGACAGGAGAAACAAAATT
ATCGAGTGTAGAAACTTTTTATTATGCATCGCCTGAAAAGAATTTAGCTG
TAGAAATAAATTCACAGTCTGGTGTGAAAGCGACACCAACTTTACAGCAT
TATCATGAACTTTTTGCTGAGATTTTCCAGAAAATCAAAATGACACGAGA
TGGTACATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001024_pilon | genome | sc0001024_pilon:556..6572 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 313-930:619 |
| Aaloc | 202-312:1673 |
| Aaloc | 67-198:2844 |
| Aaloc | 1-63:6018 |
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