XLOC_044310 (mRNA) -

Overview
NameXLOC_044310
Unique NameXLOC_044310
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000239_pilon:222655..223707+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044310 ID=XLOC_044310|Name=XLOC_044310|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1053bp|location=Sequence derived from alignment at sc0000239_pilon:222655..223707+ (Clytia hemisphaerica_ch_hm2_pilon)
atgagaattttttgcgTACTTCTTGTAAGTAAAACTTTCTCTTTTACTTT GTGGCCGGTTAATGCATTATATATTCTactgatttttttaatcaaatgta ttctttatttttttaggcTGCATTCGCTTGCACTGTGTGGGCTGCACCAA GTAAGGCTTATGCTATAAAATTTCATACCCAAATGCAAAAGCATgataac aaatgtttttttttgtacaaCAAAATGATCATAGTAACCCTGCTTATCAG AAAATACAAATTCTGAAAAGCCAAGTTTACATTTTTCTCCTGTTAATAAA TACCCTCTTTTTCTCTATACCTTATATTTCCTCTAGACTGAAGATAATAT ATTTCCTTGTTTTGAATTTCCAGGCCCAAAAGACAACGACGAGCTAGCAG AAAAACTTTGCAAAGGACTATGtattcatttaaaaagaaattgtggTCAA ATGCTTGGATGTGGTAACGCAAGATTTGACGTATCAAAACATTGCCCTGA AACTTGCGCCGCCCCAggtgaaattattttcaaaattaaaaacgttcttt tcaaggaaaaaaatcaCAAGAGCAGGAGCCTTGAATCAGACCACAAATTT AACAATCTGAGCACCAGGTTATAGAATTATTGCTAAAAAACTTATTTAAG CACTTACCCCTCGAGTAAAGAAAATCTCGATGAAAATGATAACTGGGGCT GAAAATTTGTTCTATccatataaatttgaaattggttacacaatatttta tctttttctgaACGGCCCGCTCTAACTAATTTAACAAAAGTCGTCCGGac taatatttttttaacttgacAAAATATGTGTTAACCTCTTCAAAATATAG TGTACATGGTGTTTGAAACACACCATGTAAGATTAATATAAAAACTTCCT TCCTTCAAATTTTCAGTCTCAAAAGACAACAACGCATTGGCAGAAAAAGT TTGCAAAGGACAATGTattcatttgaaaagaaattgtggTCAAATGCTTG GATGTGGTAACGCAAGATTTGACGTATCAAAACATTGCCCTGAAACTTGT GCT

Coding sequence (CDS) from alignment at sc0000239_pilon:222655..223707+

>XLOC_044310 ID=XLOC_044310|Name=XLOC_044310|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=678bp|location=Sequence derived from alignment at sc0000239_pilon:222655..223707+ (Clytia hemisphaerica_ch_hm2_pilon)
atgagaattttttgcgTACTTCTTatgagaattttttgcgTACTTCTTgc
TGCATTCGCTTGCACTGTGTGGGCTGCACCAAgcTGCATTCGCTTGCACT
GTGTGGGCTGCACCAAGCCCAAAAGACAACGACGAGCTAGCAGAAAAACT
TTGCAAAGGACTATGtattcatttaaaaagaaattgtggTCAAATGCTTG
GATGTGGTAACGCAAGATTTGACGTATCAAAACATTGCCCTGAAACTTGC
GCCGCCCCAgGCCCAAAAGACAACGACGAGCTAGCAGAAAAACTTTGCAA
AGGACTATGtattcatttaaaaagaaattgtggTCAAATGCTTGGATGTG
GTAACGCAAGATTTGACGTATCAAAACATTGCCCTGAAACTTGCGCCGCC
CCAgTCTCAAAAGACAACAACGCATTGGCAGAAAAAGTTTGCAAAGGACA
ATGTattcatttgaaaagaaattgtggTCAAATGCTTGGATGTGGTAACG
CAAGATTTGACGTATCAAAACATTGCCCTGAAACTTGTGCTTCTCAAAAG
ACAACAACGCATTGGCAGAAAAAGTTTGCAAAGGACAATGTattcatttg
aaaagaaattgtggTCAAATGCTTGGATGTGGTAACGCAAGATTTGACGT
ATCAAAACATTGCCCTGAAACTTGTGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044310XLOC_044310-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000239_pilongenomesc0000239_pilon:222655..223707 +
Properties
Property NameValue
Aaloc205-339:919
Aaloc61-201:376
Aaloc25-57:117
Aaloc1-24:1