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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000020_pilon:669375..673157- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044296 ID=XLOC_044296|Name=XLOC_044296|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3783bp|location=Sequence derived from alignment at sc0000020_pilon:669375..673157- (Clytia hemisphaerica_ch_hm2_pilon)
GATGCATCTACATCAACAGATACGGTGCTCCGTATTGAGAACTTTGGAGA
TCTTCTTGCGCAAGATTTTATTCGCAAAGCAACCAATGCTGTCTGCAAAT
CCGCCAACAGTAAGTCTTTGTTTTCACTTTTTAGAACAAAGGCTTGATAG
AAACTATGAATAAAAAACAACTTCGCTCTTCCTGAGAAACCCAACGAAAG
GTGTTTTCAGGACTTACATCCTGTATAATATACAGGGTGATTCAAACTAT
TTGTGGCGATAGGATGACCAGAAAAAAGTTCTGTCGAAAAGTAACAGGAG
TGTGGATTTTTTTATCAAACTTTGGAATTAGAATACAGTCAAAATGTTAG
CGATCTAAATATCGTTTTTCCTTTGAATGACAGTGGCATATTCAGAGGGC
TTTGATTTTTTCATATGAGATTACCTTTTATCATTTGAAGATAATGAACG
GAAAAAATCGAACTCCTAGCATGTTATCCCTTCCAATGTAGAGGGAAAGG
TAGGGCTATCTCAAAGCAGCATGGTTCATTTTATCATATCATTTTTCTTT
AGGTAAATCATGTGCAACTTCTATGGACATTGGTTTCATTTTGGATTCGT
CTGGTAGTCTAAGAAACCAATATCCACAAATCAAAGGTTTTATCCAAGAT
TTCGCCAACAATCTCGATATCTCAAAAGATGGAGTACATGTAGGCGTAGT
CACTTTCAGTTTCTATGCAACTCTCAGCATCAAATTCTCTGATTACGTTG
ATAAAACAGCCTTTAAGACCGCAGTTGGTAATATCCCTTTAATGGGTTCA
ACCACACGTATTGATAAAGCACTGAAGATATCAAATGATGAGTTATTCAG
CACATCAAACGGTGCTCGTAAAGATGTTCCAAAGATCTTGATTCTACTCA
CAGATGGTTCACAAACACAAGATCGAGATGCTGTAGACCCTGGTAAAGTT
GCCAAGACATTGCGAGAGAATGACATCACCATTGTTTCTATTGGTATTGG
TAAAGGTGTCAACGTTGATGAATTGGAACACATTGCCGGTGATCGATCAA
GGGTGTACCAAGCTGATGATTTTGATAAATTGATCGAAGGTGGATTTATC
AATAACATCCTTCAAAAGTCTTGCGAAACAGGTAATACTAATTTCTTAAC
AATGAATGGTAAAAAATAAACGTTTTGTCACGTATCACTTGATTAAATAG
TAGAATACTCGATCTTTTTTTGCACTCCACAGGTCTTTGAGACTGAGATT
GTTATCGAGAAAAGGTGGAAGAATCTGACATTGCCATTCTTAAAATTTTA
TCGATTTTATTGAATTTTACTTAGAATTCAACTGATTAAGAATAATCTCA
ATCTTTCTACTTGTAGCTAAATTCAAAGAAAATCGTTTCAATACAGTCAG
TGATATCACATTCATGCTTGACGGTTCATCTAGCGCCGCTTCTGCATTTG
GATCATTGAAAGATTTCATCATTTACATTATGTCTCGGTTCACACAATAT
GCTCATTTTGGTGTTTTACTTGGTGGTGATTCATCCCAGTTTTCTATCAA
ACACAGTAGTTCCCAATCGATTGAGAACCTTAGAGCTCAGATGGCCAATA
TAAACCTTGCCGGTGGTGACCGTATGAATCTTGACAACTCCCTGCAACAA
GCTCTTACGGAGATGCAAGATCAGAGTTCAGGCATGCGCCAAGGAGTACC
CAAAATGTTTGTTTTGTTAACTACTTCACACCAAAAACCGACTGGTAAAG
AATTGGATAAAATTAAACAAATTCAAGAATTAGGTAATATAACTCATTCC
TTAAAGTTATTATTTGTCGACCACTACACCCATGCAACAATACTTGGAGT
GTCTTCGAGAAGAAATACCTTTTCTAATTATGAAGCTATGAAATTTTTGA
TTTTCGAAATATTTATGTTTGATGAAAGGTTTACCGGTTACCGTTTAATA
GCATTTACAATAGCAGTTTTATGATACGTCGAGTTACCTTAAAACTATGA
TCTTTCCACTGCTATTTGATACTTTACTCGTCTACAAATCTAAGCTAGGT
TGATTCAGTTACTAATTTTTTCTAATGGTTGGTTGTGACTAAATTTGAAT
AGAAATCCAAGCCAAACTTCAAAAAGTCATCGATAATTGCAATATTACTG
TCAGCCTTCATTGTGACTGACTTCTTTTAACTATTTCTACACTTCAAGGT
TTTTTGTTTTTAAATAAGAGTGATATCGTTTGCTTATTCATCAATTTTAA
TTTACAAGCTTTTTGATATTGAATTGACACGGATGTGGAGCAAGATTGGT
CAGAATAAGGAAAAGAAGCACAGTTTAACAATATGCAGACACTGTCCTGA
TATGAAACATGTGTCTGATATGAAACGGGAGCACTTCTGTAAAAAAAACC
TTTAACGTTTCCTTTTAATTTTCAGGTGGTATGTTCATCATTGTTGCTGT
TGGAACGAACAATTATGATCCTTCCTTCTTGTTTTCCATACCGCGTGAGC
AGAAGAACGTGCATTTGCTACCAGGACAAAGTGGCTTGAATAACGCTTTT
GCTGACGTCATCAGTAAACAAATTTCATCATCCGCAGGTAATTTATTCGT
CGTATACTAACTGTAATGTCACAACATTCTATTTCTATAAAAAAGCAAGT
ATTAAAACATAAAACCTTAGATTTAAGATTTATATTGCCTACATAGCAAA
GTAAGATATCATACATAAACTCTGACTCGTTTTGAAACGGTTACCAAGTT
TCTCCCTTGAATCGTCTAATATTCTTCATTGAAAATGCACATCTAAGGGA
AAGAGCAATATAGAACCTTCAATTCGTAGAAAGTTCTGAAACTGTTTTTA
TCTCTTTTCCAGAGAACATCAAACAAGACGCTGTTATTGATCTTGGTTTC
ATAATTGATTCATCTGCCAGTTTCAAAGATTACTACGACCTTGAGAAAGA
CTTTATAAAAAGAATCGGAAGTCGATTCAATCTGGACCAGTATAAGACGA
GAACCTCCGTCATGACATATTCCAACTATATCAATATGATTTCCAAATTT
GCTGACTTTCATGGACAAAAGAGTTTTGAAAGTGCAATTGATAATGCTGC
TTTCTCTGGCTCAACTTCAAGGATAGACAAAGCACTTGCTGAAGCAAACG
ATAATATGTTTTCAGTGAAGAGTGGAGGGCGAGCTGGAGTGAAGCAAGTC
TTGGTCATCGTCACCGACGGTGTTTCATCTGCTTCTGGTGTTGATCCTTT
TGCGATTGCCAAGAAAATCAAGAATCAGAATATTCATGTCATCGTTGTAG
CTGTTGGAGATGCCATCAAAGCCAACTCCTTAGATGCTCTTGGTGATCAG
GTGTTTTACATGAACGATTACGCCGATCTTGGGTCGCTTGATTTTTCAAC
CAATATAATGAATTCAGTGTCTGACCTTGGTATGTATTTTGTTTATTTGG
TTCAGCTCTCAAATGGGAGAAGGATTCTGAAATTCGGAAAAACAACATTA
ATGATTTCTTTCATCGAAAGAGAACATCGAAAAAAGAGTTTTAGTTCATC
TTTGAATCATTTCTAATATTCAACTACAACAAGGATTTGTACCATTGACA
GTTTAGATATTTTATCTTCTTTTTTCAGCCAAAAAGAAGGTCGAAGCACT
TTGCCAACAAGAAGTTGATGTTGGTTTTATTCTGGATTCATCTGGCAGCT
TACGAAATGAGTACACGAAAGAAAAGGATTTCCTCAAAGCCATGGCTGCT
CAATTTGATGTTGGAAAATCAGCTCAAGTTGGT Coding sequence (CDS) from alignment at sc0000020_pilon:669375..673157- >XLOC_044296 ID=XLOC_044296|Name=XLOC_044296|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3978bp|location=Sequence derived from alignment at sc0000020_pilon:669375..673157- (Clytia hemisphaerica_ch_hm2_pilon)
GATGCATCTACATCAACAGATACGGTGCTCCGTATTGAGAACTTTGGAGA
TCTTCTTGCGCAAGATTTTATTCGCAAAGCAACCAATGCTGTCTGCAAAT
CCGCCAACAGATGCATCTACATCAACAGATACGGTGCTCCGTATTGAGAA
CTTTGGAGATCTTCTTGCGCAAGATTTTATTCGCAAAGCAACCAATGCTG
TCTGCAAATCCGCCAACAGTAAATCATGTGCAACTTCTATGGACATTGGT
TTCATTTTGGATTCGTCTGGTAGTCTAAGAAACCAATATCCACAAATCAA
AGGTTTTATCCAAGATTTCGCCAACAATCTCGATATCTCAAAAGATGGAG
TACATGTAGGCGTAGTCACTTTCAGTTTCTATGCAACTCTCAGCATCAAA
TTCTCTGATTACGTTGATAAAACAGCCTTTAAGACCGCAGTTGGTAATAT
CCCTTTAATGGGTTCAACCACACGTATTGATAAAGCACTGAAGATATCAA
ATGATGAGTTATTCAGCACATCAAACGGTGCTCGTAAAGATGTTCCAAAG
ATCTTGATTCTACTCACAGATGGTTCACAAACACAAGATCGAGATGCTGT
AGACCCTGGTAAAGTTGCCAAGACATTGCGAGAGAATGACATCACCATTG
TTTCTATTGGTATTGGTAAAGGTGTCAACGTTGATGAATTGGAACACATT
GCCGGTGATCGATCAAGGGTGTACCAAGCTGATGATTTTGATAAATTGAT
CGAAGGTGGATTTATCAATAACATCCTTCAAAAGTCTTGCGAAACAGGTA
AATCATGTGCAACTTCTATGGACATTGGTTTCATTTTGGATTCGTCTGGT
AGTCTAAGAAACCAATATCCACAAATCAAAGGTTTTATCCAAGATTTCGC
CAACAATCTCGATATCTCAAAAGATGGAGTACATGTAGGCGTAGTCACTT
TCAGTTTCTATGCAACTCTCAGCATCAAATTCTCTGATTACGTTGATAAA
ACAGCCTTTAAGACCGCAGTTGGTAATATCCCTTTAATGGGTTCAACCAC
ACGTATTGATAAAGCACTGAAGATATCAAATGATGAGTTATTCAGCACAT
CAAACGGTGCTCGTAAAGATGTTCCAAAGATCTTGATTCTACTCACAGAT
GGTTCACAAACACAAGATCGAGATGCTGTAGACCCTGGTAAAGTTGCCAA
GACATTGCGAGAGAATGACATCACCATTGTTTCTATTGGTATTGGTAAAG
GTGTCAACGTTGATGAATTGGAACACATTGCCGGTGATCGATCAAGGGTG
TACCAAGCTGATGATTTTGATAAATTGATCGAAGGTGGATTTATCAATAA
CATCCTTCAAAAGTCTTGCGAAACAGCTAAATTCAAAGAAAATCGTTTCA
ATACAGTCAGTGATATCACATTCATGCTTGACGGTTCATCTAGCGCCGCT
TCTGCATTTGGATCATTGAAAGATTTCATCATTTACATTATGTCTCGGTT
CACACAATATGCTCATTTTGGTGTTTTACTTGGTGGTGATTCATCCCAGT
TTTCTATCAAACACAGTAGTTCCCAATCGATTGAGAACCTTAGAGCTCAG
ATGGCCAATATAAACCTTGCCGGTGGTGACCGTATGAATCTTGACAACTC
CCTGCAACAAGCTCTTACGGAGATGCAAGATCAGAGTTCAGGCATGCGCC
AAGGAGTACCCAAAATGTTTGTTTTGTTAACTACTTCACACCAAAAACCG
ACTGGTAAAGAATTGGATAAAATTAAACAAATTCAAGAATTAGCTAAATT
CAAAGAAAATCGTTTCAATACAGTCAGTGATATCACATTCATGCTTGACG
GTTCATCTAGCGCCGCTTCTGCATTTGGATCATTGAAAGATTTCATCATT
TACATTATGTCTCGGTTCACACAATATGCTCATTTTGGTGTTTTACTTGG
TGGTGATTCATCCCAGTTTTCTATCAAACACAGTAGTTCCCAATCGATTG
AGAACCTTAGAGCTCAGATGGCCAATATAAACCTTGCCGGTGGTGACCGT
ATGAATCTTGACAACTCCCTGCAACAAGCTCTTACGGAGATGCAAGATCA
GAGTTCAGGCATGCGCCAAGGAGTACCCAAAATGTTTGTTTTGTTAACTA
CTTCACACCAAAAACCGACTGGTAAAGAATTGGATAAAATTAAACAAATT
CAAGAATTAGGTGGTATGTTCATCATTGTTGCTGTTGGAACGAACAATTA
TGATCCTTCCTTCTTGTTTTCCATACCGCGTGAGCAGAAGAACGTGCATT
TGCTACCAGGACAAAGTGGCTTGAATAACGCTTTTGCTGACGTCATCAGT
AAACAAATTTCATCATCCGCAGGTGGTATGTTCATCATTGTTGCTGTTGG
AACGAACAATTATGATCCTTCCTTCTTGTTTTCCATACCGCGTGAGCAGA
AGAACGTGCATTTGCTACCAGGACAAAGTGGCTTGAATAACGCTTTTGCT
GACGTCATCAGTAAACAAATTTCATCATCCGCAGAGAACATCAAACAAGA
CGCTGTTATTGATCTTGGTTTCATAATTGATTCATCTGCCAGTTTCAAAG
ATTACTACGACCTTGAGAAAGACTTTATAAAAAGAATCGGAAGTCGATTC
AATCTGGACCAGTATAAGACGAGAACCTCCGTCATGACATATTCCAACTA
TATCAATATGATTTCCAAATTTGCTGACTTTCATGGACAAAAGAGTTTTG
AAAGTGCAATTGATAATGCTGCTTTCTCTGGCTCAACTTCAAGGATAGAC
AAAGCACTTGCTGAAGCAAACGATAATATGTTTTCAGTGAAGAGTGGAGG
GCGAGCTGGAGTGAAGCAAGTCTTGGTCATCGTCACCGACGGTGTTTCAT
CTGCTTCTGGTGTTGATCCTTTTGCGATTGCCAAGAAAATCAAGAATCAG
AATATTCATGTCATCGTTGTAGCTGTTGGAGATGCCATCAAAGCCAACTC
CTTAGATGCTCTTGGTGATCAGGTGTTTTACATGAACGATTACGCCGATC
TTGGGTCGCTTGATTTTTCAACCAATATAATGAATTCAGTGTCTGACCTT
GAGAACATCAAACAAGACGCTGTTATTGATCTTGGTTTCATAATTGATTC
ATCTGCCAGTTTCAAAGATTACTACGACCTTGAGAAAGACTTTATAAAAA
GAATCGGAAGTCGATTCAATCTGGACCAGTATAAGACGAGAACCTCCGTC
ATGACATATTCCAACTATATCAATATGATTTCCAAATTTGCTGACTTTCA
TGGACAAAAGAGTTTTGAAAGTGCAATTGATAATGCTGCTTTCTCTGGCT
CAACTTCAAGGATAGACAAAGCACTTGCTGAAGCAAACGATAATATGTTT
TCAGTGAAGAGTGGAGGGCGAGCTGGAGTGAAGCAAGTCTTGGTCATCGT
CACCGACGGTGTTTCATCTGCTTCTGGTGTTGATCCTTTTGCGATTGCCA
AGAAAATCAAGAATCAGAATATTCATGTCATCGTTGTAGCTGTTGGAGAT
GCCATCAAAGCCAACTCCTTAGATGCTCTTGGTGATCAGGTGTTTTACAT
GAACGATTACGCCGATCTTGGGTCGCTTGATTTTTCAACCAATATAATGA
ATTCAGTGTCTGACCTTGCCAAAAAGAAGGTCGAAGCACTTTGCCAACAA
GAAGTTGATGTTGGTTTTATTCTGGATTCATCTGGCAGCTTACGAAATGA
GTACACGAAAGAAAAGGATTTCCTCAAAGCCATGGCTGCTCAATTTGATG
TTGGAAAATCAGCTCAAGTTGGTCCAAAAAGAAGGTCGAAGCACTTTGCC
AACAAGAAGTTGATGTTGGTTTTATTCTGGATTCATCTGGCAGCTTACGA
AATGAGTACACGAAAGAAAAGGATTTCCTCAAAGCCATGGCTGCTCAATT
TGATGTTGGAAAATCAGCTCAAGTTGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020_pilon | genome | sc0000020_pilon:669375..673157 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1837-1989:154 |
| Aaloc | 1270-1833:920 |
| Aaloc | 1108-1266:1357 |
| Aaloc | 691-1104:2416 |
| Aaloc | 112-687:3230 |
| Aaloc | 1-108:3784 |
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