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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000020_pilon:805556..808439- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044290 ID=XLOC_044290|Name=XLOC_044290|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2884bp|location=Sequence derived from alignment at sc0000020_pilon:805556..808439- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACACTGCAGGAGCTTTGGTGTTGCTGTTGGTTGCGGTTGCCAATGC
AAGACAACATCGCTACTTCCATGAAAGGGAACCTTGTTACAGACCTGAAT
TTGATCAAGATGTTCCTGAATTAGTGTAAGTTAGACTTTTTTTGCGAATA
TTGTAGAGCTGAAATCTTATTCCGATATGCTAACAATCATTAAAAATTTC
CATGGATGGCACAATAGCAATGCCCTAGGCGAGACAAATTTAATTTGTTG
TTCTACGGGCCCGACCGACCCTATTTTTGCTAAAATTAAAAAAATAATAA
TATCTAATTTCCACTATAATATATTTTACACACTAGTTATTTGTAAGAAT
TAAACTTGAATAAAGCTGAAAATTAAATCCAAGAAATTGAAAAATCATAA
AAAGCATTCCATACACTAAAATTTTATTATGATCTTCATCGAAGATAAAA
AACAAAGTGAATTTTTGATCCAGATACTTTTTGGAAAATTTTTTTGGTAC
CTTACCAACCTTGATAAATGAAAAATTTATTCTTATTTTGCCGACCGACC
GACCCATATTTTTCTAACGATCTGTCCGTAGAACAACAAATTAAATTGCT
CTCGCCCTATTGACTTTAATGGGTTCTCACGATCTTCATGTTTCTCTGTC
CATAGGTTAACCAAACGTCCACACGAATACGTCGACGTTTCAGCTCTCCC
AAAGGGTTTGGACTGGAGAGATGTCAATGGAACTAACTATGCCAGTACCA
CACGTAATCAGCACATCCCACAATATTGTGGTTCTTGTTGGGCTCATGCA
ACTACATCAGTGTTGGCCGATCGTTTGAACATATTAAGAAAAGGAGCATT
CCCTTCAGCTTTCTTGTCCGTTCAGAATGTCATCGACTGTGGTAAGAGTT
ATTTTTTTTGAAATAATACTGCAGTATCTTTAAAATATGAACTAAAACAG
ACTAAAATCCTTAAAAGATTGAATTTTGCGATGAGCTTATTTTTGACGAG
GCAGTAATTTTTTTTTACTTTTCGCAAATGGCAGGGTAAATTGGTTCCTT
TTTGCCTTAAAATAAGTGATTTAAAATAATGTTAAGTAACTTGCTTGTCG
AGGAACTTATTTTGGTGAAGCAGCAATTTTTCTAATTTGGCGAGAAGTTA
TATACCCCATAATTTTGACATAAGATTGAAGAATGAAAATTAATTAGATG
ACAGAGATTTATTCTTGTTTTTCGAACTGCTATTTCTAATTATACCATAT
TTTGAAACTTATTAATTTGTTTTTCTTAACCCGCAGGAAATGCTGGCACC
TGCCATGGTGGTGGTTTCTTACCCGTTTACAAATACGCGCATGACGAGGG
AATCCCTGATGAAACATGCAACAACTACCAAGCTAAGGACCAAGACTGTA
AACCATTCAACCAATGTGGAACTTGCACAACTTTCGGAGAATGCCATGTC
ATCAAGAATTACACTAAATTCCACGTCTCTGAATATGGTGAGCTCATGAT
TTTTTAGACATTTTTAGAGTTAAAGATACTGTGCTATTTTTTTCGAAATC
AGAAGGAGGCTTTTTATGGTTAAAGGCTCTTTAGTTAAATCAATACCAGG
ACCTTGCCAATTTCCATTAGTGAATCACCCTTTCTTTTGTTCAGTGAAGT
CTCCAAAACTCGAACCTGCACAAATTTGTTCGAGTTAAGGAAATTTCGAT
TTACGGTGTAGGTTTACAAGATATTATTGTTTACTGAAGACCTTGCCAAT
TTCCATTTTTTGTGAAAAATTGAGGTTCTTTGTTTTTCTGAATGTCTCGC
TTAATGAATTTCTTTTGGTGTATCTCAGGTTAAAGCCTTGACTATATTGA
ATTTCGCAAAAGGCTAAAGTCCATACCCCTGACAGCAAAGCAAATATCTG
TGTTTTCTGACTTGGTCTCATTTCAAGCTTTTTTTTTATTATTTGAACTT
ATTAGCTGGTCATCGATAATAGCCATCATTTTTATACTAAACCTTTCTCT
TTTAGGATCCATCCAAGGTCGTGAACAAATGATGGCAGAATTATCAGAGC
GTGGCCCAATCTCTTGTGGTGTCATGGCAACAGAAACATTCGATCAATAC
ACCGGTGGTGTCTTCATGGAGTATCACGAGGTAAACACTCATTGTGTTTT
TCTACTTAATTAAAAAATCAGAACTCTTCATATTGACCTAGAACATAGAC
AAAATCGAAAAAAAATTCTTAACGTTTTGAACTAACGTTAAAAATGACTA
AAAGTCTCTACCCTGAGCATGGACATGCCCTGAGCTTTAATAGAAATAGT
GATGTTAGACCTCTAAAAGGTTTTTAGGGGTTCAAAAAGAAGTCAGTGGG
GTCACAGTGTCACTTCCTTGGGTCGAAAAACCGTTCCTTGTGCACGTAGT
TCTCACTTTGATTGGTCCCTGTAATATATCACGCCAGCAAAAAGTTAGAA
TATCATATCACCAATAAATTCATACTGTTGATGTGGGCATGCGGCATTTG
CATACAATAGACTTCTATTTTGAAATCAATGGTATTTTTTTGAAAAATAA
AGACCGTTATATTAGCGGCCTAAAGTGTGAAAAAAAAATATCACTAGTAA
TAGAATCCTTCTTCCGATTCCTTCACCAAACTTATGTTTTTCTCTCTCAT
TTTTAGGAAAGTGCTATCAATCACGCTATCTCTGTCCATGGGTGGGGCGT
TGATGATAATGGCGTTGAATATTGGATCGGGCGTAACTCATGGGGCGAAC
CATGGGGAGAACACGGGTGGTTTAAAGTTCCAACAAGTTTATATAAGAAT
GGAGATGGCAATAAATACAACTTGGGTATCGAAACTCAATGCTCATGGGC
TGTTCCAATCGTACCAAAAGACTGGCAAGTCTGA Coding sequence (CDS) from alignment at sc0000020_pilon:805556..808439- >XLOC_044290 ID=XLOC_044290|Name=XLOC_044290|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1830bp|location=Sequence derived from alignment at sc0000020_pilon:805556..808439- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACACTGCAGGAGCTTTGGTGTTGCTGTTGGTTGCGGTTGCCAATGC
AAGACAACATCGCTACTTCCATGAAAGGGAACCTTGTTACAGACCTGAAT
TTGATCAAGATGTTCCTGAATTAGTATGAACACTGCAGGAGCTTTGGTGT
TGCTGTTGGTTGCGGTTGCCAATGCAAGACAACATCGCTACTTCCATGAA
AGGGAACCTTGTTACAGACCTGAATTTGATCAAGATGTTCCTGAATTAGT
GTTAACCAAACGTCCACACGAATACGTCGACGTTTCAGCTCTCCCAAAGG
GTTTGGACTGGAGAGATGTCAATGGAACTAACTATGCCAGTACCACACGT
AATCAGCACATCCCACAATATTGTGGTTCTTGTTGGGCTCATGCAACTAC
ATCAGTGTTGGCCGATCGTTTGAACATATTAAGAAAAGGAGCATTCCCTT
CAGCTTTCTTGTCCGTTCAGAATGTCATCGACTGTGGTTAACCAAACGTC
CACACGAATACGTCGACGTTTCAGCTCTCCCAAAGGGTTTGGACTGGAGA
GATGTCAATGGAACTAACTATGCCAGTACCACACGTAATCAGCACATCCC
ACAATATTGTGGTTCTTGTTGGGCTCATGCAACTACATCAGTGTTGGCCG
ATCGTTTGAACATATTAAGAAAAGGAGCATTCCCTTCAGCTTTCTTGTCC
GTTCAGAATGTCATCGACTGTGGAAATGCTGGCACCTGCCATGGTGGTGG
TTTCTTACCCGTTTACAAATACGCGCATGACGAGGGAATCCCTGATGAAA
CATGCAACAACTACCAAGCTAAGGACCAAGACTGTAAACCATTCAACCAA
TGTGGAACTTGCACAACTTTCGGAGAATGCCATGTCATCAAGAATTACAC
TAAATTCCACGTCTCTGAATATGGAAATGCTGGCACCTGCCATGGTGGTG
GTTTCTTACCCGTTTACAAATACGCGCATGACGAGGGAATCCCTGATGAA
ACATGCAACAACTACCAAGCTAAGGACCAAGACTGTAAACCATTCAACCA
ATGTGGAACTTGCACAACTTTCGGAGAATGCCATGTCATCAAGAATTACA
CTAAATTCCACGTCTCTGAATATGGATCCATCCAAGGTCGTGAACAAATG
ATGGCAGAATTATCAGAGCGTGGCCCAATCTCTTGTGGTGTCATGGCAAC
AGAAACATTCGATCAATACACCGGTGGTGTCTTCATGGAGTATCACGAGG
ATCCATCCAAGGTCGTGAACAAATGATGGCAGAATTATCAGAGCGTGGCC
CAATCTCTTGTGGTGTCATGGCAACAGAAACATTCGATCAATACACCGGT
GGTGTCTTCATGGAGTATCACGAGGAAAGTGCTATCAATCACGCTATCTC
TGTCCATGGGTGGGGCGTTGATGATAATGGCGTTGAATATTGGATCGGGC
GTAACTCATGGGGCGAACCATGGGGAGAACACGGGTGGTTTAAAGTTCCA
ACAAGTTTATATAAGAATGGAGATGGCAATAAATACAACTTGGGTATCGA
AACTCAATGCTCATGGGCTGTTCCAATCGTACCAAAAGACTGGCAAGTCT
GAGAAAGTGCTATCAATCACGCTATCTCTGTCCATGGGTGGGGCGTTGAT
GATAATGGCGTTGAATATTGGATCGGGCGTAACTCATGGGGCGAACCATG
GGGAGAACACGGGTGGTTTAAAGTTCCAACAAGTTTATATAAGAATGGAG
ATGGCAATAAATACAACTTGGGTATCGAAACTCAATGCTCATGGGCTGTT
CCAATCGTACCAAAAGACTGGCAAGTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020_pilon | genome | sc0000020_pilon:805556..808439 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 688-915:229 |
| Aaloc | 565-687:878 |
| Aaloc | 364-561:1597 |
| Aaloc | 127-360:2229 |
| Aaloc | 1-123:2885 |
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