|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000020_pilon:874499..878914- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044289 ID=XLOC_044289|Name=XLOC_044289|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4416bp|location=Sequence derived from alignment at sc0000020_pilon:874499..878914- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTGGTATGAAGGGATTTATGACAAATGCAAATACGTTCAACAAGA
ATTCAAACGATGTTTTGGTTATTGGTCTGATCAAGTTAATGGCAACAATG
AAGCAGCGGATCATCAAAATGAATCAAAAGTTGCAGTTGAAAAACATAAA
CCTGTCGAGGACGAGAAAGTTCCTGCATCAAAAACACATGTGAAAGTTTT
ATTGAAGGTAAAATATTTTTCAGATGAGGCGAGAGTACTTTCTCAGTCCT
CTGCTAAACTTTAAAAGACAATCAGGGCTTTATTATTCTATAGCGGAACA
CACCGCCCTGTAACTCCTGATTCTATTTCAGTGATTATTAGAAATCGAGG
CGCTAATTAGAGAGATAAATAGAGAAAAAGCAGCATTGTTTCTTTGATTT
TCCAACAAAATTAATGCCAATTTTCTTGAACCTAAAAATAATTTTGCATT
TCTTTCAGGATGACTTGATAACAAATCAATCAATTGATGTAATTGACGAC
CAAATCACAACTTCTGAACAAAATTTAGTTTGGATGGTTTGGAAACAGTT
GATGGCGGGCGGACTTGGCGGATTAGGTGAGTAGAGGGCGGTACTTTTGT
CCGATTTCCCTGTATTATTGATAACTTAAACTTGAAACCTAATAATATTT
TCCAACATGGTAAAGTCTGCTATATTGGAATTGCAATTGTCCCATAGGGA
AAAACTTACACTTAGAGCCCTTAGCCTATCATTCTGTGTTCCATGAGACA
TCTTATATTTATGGAAACTATGGAAACGCTTGCAGTGACAAAGACGAGTT
AGTTTCAGTCCCAGCCTTCGAGGTCGTATAAATTGAATGTAATTTTCTTC
ACTTTCCAGTGTCAAGGACTACAACCGCGCCTCTCGATCGAATCAAAATT
TTATTGCAGGTAAACTCTAAAATATTCAATATGCTTAAATCATAATCAAA
AACACTACTGGGGCCTCTTTAAAAAAATTTGAAATACATTTCGACCAAAT
TAATTTTATATAGCCATGTAACAATCACATTATGAGATATTTCCACCACC
TCTAGAATAATATAAAAATTATATAAATTTAAATGAATTATATAAAAAAC
ACCAATCAAACTCTAGTTGAGTATAAATTGTTCTTTCAGAAATACTAATT
AAAGAAAGGGTGTGGTGGCCACCTGAACCGGCATCACAATAGGTCCATTA
AGCCACCAAACCCAGAAGAATCTCTACAATTTTTTTCTTTCTACTTAGGC
GTCTGCTGGCATAGGAAAAGAGAGGATTCCAATTTATGGAGTATTGAAGT
GTACCATCAAAGAAGGTGGTCTTCGTTCATTGTGGAGAGGTAATTTCATC
AATTGTATGAAAGTTGGACCCGAATCTGCGATTCGATTGTTGACATTTGA
ACAGGTAACGTCTTTTGATTTAGCAGTCCGATTTCCTCCCCATCTGTTTC
TGTGAAAAAAATACGACATGAAATAAAAATCATATTTTTTCCTCCCGCAA
GGCACTAAGTGATATTGCCAGGGGTAAACTAGAGTGGTTGCCAAACCACC
CAGTAACCGGTGTCATATTGGCTTTTGGATGGACTCGGTGATGAAATACA
TACTCTGCCACATACATAGGTTGTATCAATAGGCAGTTGATGACTGGTTG
TTTTGGTTGTCTTTACGATTTACATTCGCCATGACACCTGAAAACCAAAA
GAATAAAATAAACAATAAAACCACGTAAGACTTAAACAAGGGATTTTAGG
GGGCTATTGCAATCTCTGGTTCGATCATAGGCCCAATATTTTAGGAAAAG
ATGTCTTGATCCGAATTACATAAAATTCCATTTAATTGGATTATTTGAAT
TAGAGAGAATTTCCAATTTATTCCATAGATGAAATTATTGATTGGTCAAG
GAGAAAGCGATTTGGAAATGTACCAACGATTTGTTGCTGGGTCAATCGCT
GGTATTATTGCACAAACATCCATCTACCCAATGGAGGTACGTTTGTTTTG
ACATTTTGAAGAACTCTACTTTGTTAGGTGGTTAACAGATAACATAACAC
AGCTACTTCTGCCAAAATATATAAAACCCTTCAATTGGATAGTGTTATTT
TGTGAATATCATGTTCATGTTCCCTCGAAAATCAAAAGCACAAACATGAC
AAAAATTAAGGATAGTCCTGCGGTTCAGCCAGTTTGAAAAAAGACAAAAC
CAAGCTGGCGCTTTATTCACGAAAAACTTCTCGTAGAGATTTTTTTTAAC
CGACCAGCTTGGTTCGTCTCTCGAATTATTTGGAAATTTCTTTTTTGGTG
GTAATGTTTTCATTTGATCGTTGAGCAAACTTTTGTATTGTAAGTACGGT
AATCTTCGTCGTTATAACCATTCTCTCAAATTTTCAATCTCAGGTTATAA
GGACTCGGATGGCAGTGGCAAAAACAGGTGTCTATAAAAACTTTTACGAT
TGTACCAAAAAATTGAAACGCGAAATTGGTTGGCGTGGATTTTATAAGGG
TATCATTCCTAGTTTGATTGGTATCGTCCCTAATGCTGGAATCGACCTCT
GCATTTATGAGGTAAGGTTATTGATTATTCAGGGAGATAGTACAAGAATT
TTTCGATAAATCACACTACCCCAGTTTTCACCACAAAAGTGTAAATTTGA
CTTAGATGGGACTTTGAAATTGGATTGTTTATCAAAAGAGACAAGTCATC
GGACTATTTGATGAATAATAATTTTTTTCTCGCATCATTCAATGGAAGAA
AGGATTTGACCAGAGAAAGGCCTTGAAAGGGAGGAAGTAATCAATAGAAA
GGAGAGTGGACCGAGTGGACCATCTTCTAAAAAAAAAACCTAAAAATTTA
AGAATTTAAATTTTAGCATGTGATTCAAATTCTTTACTTTATCCATTTTT
AGACAATGAAACAGAATTGGTTAAACAGTTTTGCGGTCAAGCCTCAACGC
CCATCTTTCACCTCTACATTGTTAGCTGGTGGAATGTCAAGCCTGTGTTC
CATGGCTGTTTGTTATCCGTTCGCATTGATTAGAACGAACCTTCAAGCTG
AAAGTAAGTATAAAATATGTACTTTCCTTATAATAGGCTTTTTGATAGAA
CAAAGGAAGTACTGAGGAATTTTTGTGACAAGGAACTTGTGTGCCAAATT
TCAATTAAACAAGCTAGATGCTGAATGGACCTACCTGATGATGAAAGTTA
GATATCAATAAAGAGAAAGATGAAAACAATCAGTCAGAAAACATAGCGTT
TAGCAAAAATGCATAACGTATTAATTTCATCATTGATTGTTGACAGGGGA
GAGGGATATTTCCGGCATTTTCGGCCGGAAAAAAATGTTTTTCGAAAATC
GGGCTCCGTCACATTTTAGGTATTGTCATTTTGCATTAGTGTGCAAAATT
TCATAAAAAAATATAAAGTACGGCTCGAGAAATTCAAGAAATACTGTCTT
TCCGGCGAAAATAGGTTGTTCCGGCGATTTTTAAATAGTTCCGGCTTCAA
AAATCAATTTCATTGAAAATTGAAACATGCTCGATGGTGGGCATTGCTAT
TAATAATGTTTTTGAATGAAAAAACAACTAATTATAAGGAAAAAGTCCAA
TGAAAATCCAGAAAAACGGCGATTTCCGGCATATTTCCGGCATTTTCGGC
TGGAAATTTTTTTTCTCAAAAATCGGACTCGGCCATGTTTTGGGCATTGT
TAATACGCATCTTTGAGCAAAAAATCAGAAAAAACTAATAATAAAATCTC
GAGAAAATACCAAAAAAACAGTTTTTCCGGCATATTCCGACATTTTCGGC
CGGAAAAAAAATGTTTTTCGAAAATCAGGTTCTGTCAAATTTTGGACATT
GCCATTTTGCATCTTTGTGCCAAAAATCAGAAAAAACTAATGAGCCAATC
TCGAGAAAAGCTGGTAACAGACGAACGAACGGACGAACGGACAACGGTTA
ATTTATAGGACCTCCAGGTAAGTCCAAAAAACCCAACTAGATCAAAACTT
GAGAGGTGTGTTGGTACAGAACCCCTAGTTTAATCCACCCCTACTAGGGC
CTAGTACGGATAGGGTTAAAATCTTTGTGGATTTTGGAGTTAAAGAGTTC
TCATAAAATTATTTTTCACTCCCTGTAGGATCAAAGTTACCTAAAAATTG
AAGTAATTTACCGCATTCCATTTTCTTTGTATAAAAAACAGGTGTATCTC
AAATTCCTCCATTTTTTCATAGCAATCAAACCAGAGCTGAAAGGTTCAAA
TGAATTCATTACAATGAGCAACTCCTTCCGTGACATCGTCAAGACTCATG
GTATTCGTGGTTTATATCGTGGTATTGTACCAAACATGCTGAAAGTCGTT
CCTGCTTGTTCGATTAGTTATATGGTTTATGAACAAGCTCGTGATCAACT
AGGGCTTCATTCATAG Coding sequence (CDS) from alignment at sc0000020_pilon:874499..878914- >XLOC_044289 ID=XLOC_044289|Name=XLOC_044289|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2304bp|location=Sequence derived from alignment at sc0000020_pilon:874499..878914- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTGGTATGAAGGGATTTATGACAAATGCAAATACGTTCAACAAGA
ATTCAAACGATGTTTTGGTTATTGGTCTGATCAAGTTAATGGCAACAATG
AAGCAGCGGATCATCAAAATGAATCAAAAGTTGCAGTTGAAAAACATAAA
CCTGTCGAGGACGAGAAAGTTCCTGCATCAAAAACACATGTGAAAGTTTT
ATTGAAGATGTCTTGGTATGAAGGGATTTATGACAAATGCAAATACGTTC
AACAAGAATTCAAACGATGTTTTGGTTATTGGTCTGATCAAGTTAATGGC
AACAATGAAGCAGCGGATCATCAAAATGAATCAAAAGTTGCAGTTGAAAA
ACATAAACCTGTCGAGGACGAGAAAGTTCCTGCATCAAAAACACATGTGA
AAGTTTTATTGAAGGATGACTTGATAACAAATCAATCAATTGATGTAATT
GACGACCAAATCACAACTTCTGAACAAAATTTAGTTTGGATGGTTTGGAA
ACAGTTGATGGCGGGCGGACTTGGCGGATTAGGATGACTTGATAACAAAT
CAATCAATTGATGTAATTGACGACCAAATCACAACTTCTGAACAAAATTT
AGTTTGGATGGTTTGGAAACAGTTGATGGCGGGCGGACTTGGCGGATTAG
TGTCAAGGACTACAACCGCGCCTCTCGATCGAATCAAAATTTTATTGCAG
TGTCAAGGACTACAACCGCGCCTCTCGATCGAATCAAAATTTTATTGCAG
GCGTCTGCTGGCATAGGAAAAGAGAGGATTCCAATTTATGGAGTATTGAA
GTGTACCATCAAAGAAGGTGGTCTTCGTTCATTGTGGAGAGGTAATTTCA
TCAATTGTATGAAAGTTGGACCCGAATCTGCGATTCGATTGTTGACATTT
GAACAGGCGTCTGCTGGCATAGGAAAAGAGAGGATTCCAATTTATGGAGT
ATTGAAGTGTACCATCAAAGAAGGTGGTCTTCGTTCATTGTGGAGAGGTA
ATTTCATCAATTGTATGAAAGTTGGACCCGAATCTGCGATTCGATTGTTG
ACATTTGAACAGATGAAATTATTGATTGGTCAAGGAGAAAGCGATTTGGA
AATGTACCAACGATTTGTTGCTGGGTCAATCGCTGGTATTATTGCACAAA
CATCCATCTACCCAATGGAGATGAAATTATTGATTGGTCAAGGAGAAAGC
GATTTGGAAATGTACCAACGATTTGTTGCTGGGTCAATCGCTGGTATTAT
TGCACAAACATCCATCTACCCAATGGAGGTTATAAGGACTCGGATGGCAG
TGGCAAAAACAGGTGTCTATAAAAACTTTTACGATTGTACCAAAAAATTG
AAACGCGAAATTGGTTGGCGTGGATTTTATAAGGGTATCATTCCTAGTTT
GATTGGTATCGTCCCTAATGCTGGAATCGACCTCTGCATTTATGAGGTTA
TAAGGACTCGGATGGCAGTGGCAAAAACAGGTGTCTATAAAAACTTTTAC
GATTGTACCAAAAAATTGAAACGCGAAATTGGTTGGCGTGGATTTTATAA
GGGTATCATTCCTAGTTTGATTGGTATCGTCCCTAATGCTGGAATCGACC
TCTGCATTTATGAGACAATGAAACAGAATTGGTTAAACAGTTTTGCGGTC
AAGCCTCAACGCCCATCTTTCACCTCTACATTGTTAGCTGGTGGAATGTC
AAGCCTGTGTTCCATGGCTGTTTGTTATCCGTTCGCATTGATTAGAACGA
ACCTTCAAGCTGAAAACAATGAAACAGAATTGGTTAAACAGTTTTGCGGT
CAAGCCTCAACGCCCATCTTTCACCTCTACATTGTTAGCTGGTGGAATGT
CAAGCCTGTGTTCCATGGCTGTTTGTTATCCGTTCGCATTGATTAGAACG
AACCTTCAAGCTGAAACAATCAAACCAGAGCTGAAAGGTTCAAATGAATT
CATTACAATGAGCAACTCCTTCCGTGACATCGTCAAGACTCATGGTATTC
GTGGTTTATATCGTGGTATTGTACCAAACATGCTGAAAGTCGTTCCTGCT
TGTTCGATTAGTTATATGGTTTATGAACAAGCTCGTGATCAACTAGGGCT
TCATTCATAGCAATCAAACCAGAGCTGAAAGGTTCAAATGAATTCATTAC
AATGAGCAACTCCTTCCGTGACATCGTCAAGACTCATGGTATTCGTGGTT
TATATCGTGGTATTGTACCAAACATGCTGAAAGTCGTTCCTGCTTGTTCG
ATTAGTTATATGGTTTATGAACAAGCTCGTGATCAACTAGGGCTTCATTC
ATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020_pilon | genome | sc0000020_pilon:874499..878914 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 961-1152:193 |
| Aaloc | 808-957:1515 |
| Aaloc | 640-807:2024 |
| Aaloc | 532-639:2539 |
| Aaloc | 376-531:3169 |
| Aaloc | 328-375:3556 |
| Aaloc | 208-324:3959 |
| Aaloc | 1-207:4417 |
|
