|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000020_pilon:966191..970187- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044287 ID=XLOC_044287|Name=XLOC_044287|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3997bp|location=Sequence derived from alignment at sc0000020_pilon:966191..970187- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAAAAGCAAAGCAATATGATTGGAAAGACAGCAATATGGCCTTGTT
TGGCTCCGACACTGAAAAAGAGGTAAGCAATCCATTTTCATGAAATGTCT
CTACAGTTTATTTAACTCTAACCTCGATAACTCGACTGTCTCCTTAACTC
GAACAAGTTTTATGGAAAACCCCTATACTCCATAACTCGAAAATCCCATA
ACTCGAATAAATTTTCGTTCCCGTGTGTTTCGAGACTCCAATGTATTAAA
AATACGAAAGGAAAGAGACTCAAAGGCGTGAAAGGTGGAATCGATTGGCG
AAGTTAGTATTATTATTATCATTATTATTATTGCAAATTAAATCTACAAA
GTATCAAAAAATAACATTCTCAAAACATTTGGTTAGCATTTTTGCAATAG
CAAAAAGTTATATATAACATTTTGAACTAGCATGATAGGTCCTTAGAGTA
TTTAGGATTAAGAAATATCGAATATACAACTCTACACATGCTGTGCATAT
TACTTACAATCAACTATGATCTTAATCTCAATACCTCATGGCAGGATAAA
AGAAAAATATTAAAAGATCTTGCCAAGATGATCATGCTTTAGGGACTATG
CCATGCGATTAACTGATGAGGGTTTTAAAATCAAACTGAGATAAAATCAA
TCAAATTACCTTTTCATACATTCATACAGGTAAAGAAAGAGTCAGCTGAA
CAAGAAAAGGCATGGCATGGATCTGGTCAAAAAGTTGGTGTCGAAATTTG
GCGGATCAACAAATTCAAGGTAAGCATGGGAAAATATTGTGAAAATGACA
GCAACAAAAGCTTTGTTCAAGCTAGTCTGATGCCTTTGACAACCCTATAA
AATTGATACCTCCGATGAGATTCCTTTAAAGATATCATGTAATAAGTAGG
TTGGACCATATAGAATCAGAACAAGAAGAAACCTCTAGATCTATAAGTAA
TGTTTGAGAAATTAAAAGGTGCTGGAAAAGGAATGGATGAGGCTTTCGAT
TTATTCGAAGGTACATTATCGAGGGCAATCATCATAATATTAAATTTCAT
TCCAACAGATTGAGAAATGGCCAACTGAGGATTATGGGAAATTTTACAGC
GGAGATTCGTACATCATTTTGAACACTTACAAAGATGCTGACGAGGATGT
AAGTATGAACAAGTTACTGCCTACAGACCAGGCGATTCTACCAGTCCAAT
ATCATCATCAGTATAAACATTTTGTTTACTGCACTTTATGTAGTCTACAT
TATAGAACATTTTAAAGGTGTTTAGACCTTCCTGTTCGACGATGTGATAT
TATAACGTAGCCTATTTTTCAGGATTCTTTAAAAGAAAATCAAGAATGCA
TTTATACATCTAAATTGGCATGACTGAAAAATGCAACACCTGTGACATGT
ATAAGAATAATGCCTTGTTACAGATCTACAGGGACTGCACCAACATGATT
ATATACTATGACTTGCCTTTACCTTTTTTAGGAATTGAACTACGACCTTC
ACTTTTGGATTGGCAAATACTCCACACAAGATGAGTACGGAACAGCAGCC
TACAAAACTGTCGAATTGGACACTTTCCATAATGATAAACCAGTGCAACA
TCGTGAAGTTCAAGGACATGAATCTTCTCTCTTCAAAACATATTTCGGTA
AGTTACGCCAAACCTGAATAAGATAAATTTTCGGACCTTGGTATCTGACC
AGTATTTGGGTTTGTCATGATGGTTAAAGCAAAAATACAATCTTGGCCTT
TAAAACCTGCACTCGAACAGCTTAATTGTGAAATATGCTCGATAAGTTGG
TTAAAAGCATATTCTTTTGAAAGAGTTCTCTGTTATGAATTATAATTTTC
AAATTGACACTGATAAAAGTAAAGTTTTCAAATGAAAATCGAATTCAAAG
AAAATCTAAATGATCATCAGAAAAACATTTGGAAACACATTGATTTTGAC
ATAATTTCTTCCCATTCTTTTCACCAACTTAACAGAGACAATCACGTTGA
TGAAAGGAGGAGCAGCTACGGGTTTCCGTCACGTCAAACCAACAGAATAT
AAACCAAGATTGTTCCAAGTGGTTGGAGAACGTAAGAAAATTGACGTCCT
TGAAATCCCGATGAAGAAAGGAAATGTCAACAGCGATGATGTCTTCATCT
TTGATTTAGGCCTTCAAATTTACCAAGTAAGTAAACATTCCGGATATGTA
CTTTGGCCATTAGATTTACTATACTCGAGATATTCTATGTTCGACCAAAA
CTCAACTGTATGTTTGACCGTAGATGTTAAAGAAGGTTTGGTTTCAGCCT
GGGGTGTAGATCTTAAAAAAATCCAACCAGATTTTCCAAAACACCTTTTG
ACAATTTTAAGGTAATTGATGATGTGAGTATTTGATTTACTGAACCAGGA
AACTAGACTATATAGAAATCCTCATCGATTATACGGTTTTTGCATCAAAA
GTATCATATCTTTTGTTTGAACCGATATGAAACATTTGATTTTAAAAATA
GTTATATGTTCCAAACTTACCATTTTGAAAATGTAACACAGCTGCTAAAT
CTAATCTATATACCAACGCCTTCTTTTAGCTGAATGGCTCTAACGCAAAC
AAGGACGAGAAATTCAGAGCCACACAATATGTTCAAAAGATCAAATCTGA
AAGAGGTGGTAAAGCTAAGTTAGAAGTATTAGAAGAGGGTGATACAGCGA
GCGATCATGAAATCTTTAAATCGTTGAAAGATGGTGTCAGCCGGAACAGC
GTCAAAAGAGTAAGTGGAAATTAGTAAGGCCTTATTATGGAAAAGTTATC
ATTTTATTATTTGTATTCCTCCATGCAAACTCTACAAGTGAAAATGAACG
GTGCACTTGACTTAACTACGGAATGATACTTGCATATTGAACTTAAAGAA
CTAGATCACTCCGATACACGTTTTTTCTTTAGCATAGAGTTTATTTGAAC
TGACGCTGGGGCCATACTCTTAAATTTCAATTGTTCTATAACAATAGATC
TATTGTTTTCAAGCCCAAATCACAATAATGGCTATGCTTCATAAAGTCTT
TTTATTAAAAAAAACGTGTACTTTATACATGCGTTAGAAGCTTAGCCTCA
TGCAAGTCTTGAATATTGAGAGTGAGGAATATCCCAGGAATCCTAACAGA
TGTTTCATCACCTTTTTAGCGTGCACCACCACCACCAACACAAAAAGGAA
TGTATAAATTGAGTGATGCCAGTGGTAAATTGCAATTCTCGACCATTTCG
ACTGGCTCATTGAACAAATCAGGCCTGGACACTAAAGATGTTTTCTTAGT
TGATGGTGGAAGCCACTTGTATGTCTGGGTTGGAAATAGTAAGTCAATAG
TTTAAAGGAGATCAATGCTCGAAATAACGATTTCAAGTGGGTCGGGCAAA
ATTTCCAATAAGGGTTGCTTTAGCTTGAAAAATATGATTTTTGGGTCGGA
CAAGGAACGACAATTTGGGTCGGACGTCCGACCGTTATTTCAAGCCCTGG
CAGATTGTTGTATCCCATTTTTTGGTAACTATATTCAAAATTTGGAAAAT
ATTTTCCTGTCCTATTGTTTTTTACTGCTCATTATGACCACAGAAAAGGG
TCAGCTTAAGAATTGTTGTGGTCTTAAAAGTTGAAACCTAAATATCTTTT
TTCATTAATTGTAACAAAGGTTTACCTTTAGTTCTCTTCGAAAATTTCGG
AGTGAGTCATTGAAAAATCTTTTGGCACCTTACAAATTAATAATATAAAA
ATGCACATAATTACTCTTTTGGTAACCTTCCATTGTTGCTTTTAAAAGAG
ATTCGGTGAATTTTTTTAAGTGCTAATTATGTTCATTCAAATATTTATCA
TCAGGCGCATCTAGAGCTGAGCGACAAAATGGCATGGTTTTTGCAACGAA
ATTCTTGCAAGACAAAAAGAACCCATTGTGTCCCGTCACAGTCATGAACG
AAAAGAAAGCCAACAAGAATCAAGTGTTCCAAGCTTTATTTGCCTGA Coding sequence (CDS) from alignment at sc0000020_pilon:966191..970187- >XLOC_044287 ID=XLOC_044287|Name=XLOC_044287|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2202bp|location=Sequence derived from alignment at sc0000020_pilon:966191..970187- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAAAAGCAAAGCAATATGATTGGAAAGACAGCAATATGGCCTTGTT
TGGCTCCGACACTGAAAAAGAGATGCAAAAAGCAAAGCAATATGATTGGA
AAGACAGCAATATGGCCTTGTTTGGCTCCGACACTGAAAAAGAGGTAAAG
AAAGAGTCAGCTGAACAAGAAAAGGCATGGCATGGATCTGGTCAAAAAGT
TGGTGTCGAAATTTGGCGGATCAACAAATTCAAGGTAAAGAAAGAGTCAG
CTGAACAAGAAAAGGCATGGCATGGATCTGGTCAAAAAGTTGGTGTCGAA
ATTTGGCGGATCAACAAATTCAAGATTGAGAAATGGCCAACTGAGGATTA
TGGGAAATTTTACAGCGGAGATTCGTACATCATTTTGAACACTTACAAAG
ATGCTGACGAGGATATTGAGAAATGGCCAACTGAGGATTATGGGAAATTT
TACAGCGGAGATTCGTACATCATTTTGAACACTTACAAAGATGCTGACGA
GGATGAATTGAACTACGACCTTCACTTTTGGATTGGCAAATACTCCACAC
AAGATGAGTACGGAACAGCAGCCTACAAAACTGTCGAATTGGACACTTTC
CATAATGATAAACCAGTGCAACATCGTGAAGTTCAAGGACATGAATCTTC
TCTCTTCAAAACATATTTCGGAATTGAACTACGACCTTCACTTTTGGATT
GGCAAATACTCCACACAAGATGAGTACGGAACAGCAGCCTACAAAACTGT
CGAATTGGACACTTTCCATAATGATAAACCAGTGCAACATCGTGAAGTTC
AAGGACATGAATCTTCTCTCTTCAAAACATATTTCGAGACAATCACGTTG
ATGAAAGGAGGAGCAGCTACGGGTTTCCGTCACGTCAAACCAACAGAATA
TAAACCAAGATTGTTCCAAGTGGTTGGAGAACGTAAGAAAATTGACGTCC
TTGAAATCCCGATGAAGAAAGGAAATGTCAACAGCGATGATGTCTTCATC
TTTGATTTAGGCCTTCAAATTTACCAAAGACAATCACGTTGATGAAAGGA
GGAGCAGCTACGGGTTTCCGTCACGTCAAACCAACAGAATATAAACCAAG
ATTGTTCCAAGTGGTTGGAGAACGTAAGAAAATTGACGTCCTTGAAATCC
CGATGAAGAAAGGAAATGTCAACAGCGATGATGTCTTCATCTTTGATTTA
GGCCTTCAAATTTACCAACTGAATGGCTCTAACGCAAACAAGGACGAGAA
ATTCAGAGCCACACAATATGTTCAAAAGATCAAATCTGAAAGAGGTGGTA
AAGCTAAGTTAGAAGTATTAGAAGAGGGTGATACAGCGAGCGATCATGAA
ATCTTTAAATCGTTGAAAGATGGTGTCAGCCGGAACAGCGTCAAAAGACT
GAATGGCTCTAACGCAAACAAGGACGAGAAATTCAGAGCCACACAATATG
TTCAAAAGATCAAATCTGAAAGAGGTGGTAAAGCTAAGTTAGAAGTATTA
GAAGAGGGTGATACAGCGAGCGATCATGAAATCTTTAAATCGTTGAAAGA
TGGTGTCAGCCGGAACAGCGTCAAAAGACGTGCACCACCACCACCAACAC
AAAAAGGAATGTATAAATTGAGTGATGCCAGTGGTAAATTGCAATTCTCG
ACCATTTCGACTGGCTCATTGAACAAATCAGGCCTGGACACTAAAGATGT
TTTCTTAGTTGATGGTGGAAGCCACTTGTATGTCTGGGTTGGAAATACGT
GCACCACCACCACCAACACAAAAAGGAATGTATAAATTGAGTGATGCCAG
TGGTAAATTGCAATTCTCGACCATTTCGACTGGCTCATTGAACAAATCAG
GCCTGGACACTAAAGATGTTTTCTTAGTTGATGGTGGAAGCCACTTGTAT
GTCTGGGTTGGAAATAGCGCATCTAGAGCTGAGCGACAAAATGGCATGGT
TTTTGCAACGAAATTCTTGCAAGACAAAAAGAACCCATTGTGTCCCGTCA
CAGTCATGAACGAAAAGAAAGCCAACAAGAATCAAGTGTTCCAAGCTTTA
TTTGCCTGAGCGCATCTAGAGCTGAGCGACAAAATGGCATGGTTTTTGCA
ACGAAATTCTTGCAAGACAAAAAGAACCCATTGTGTCCCGTCACAGTCAT
GAACGAAAAGAAAGCCAACAAGAATCAAGTGTTCCAAGCTTTATTTGCCT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020_pilon | genome | sc0000020_pilon:966191..970187 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 961-1101:142 |
| Aaloc | 790-957:829 |
| Aaloc | 610-789:1419 |
| Aaloc | 421-609:2011 |
| Aaloc | 253-417:2517 |
| Aaloc | 163-252:2940 |
| Aaloc | 73-162:3319 |
| Aaloc | 1-72:3998 |
|
