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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000020_pilon:1091531..1095142- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044285 ID=XLOC_044285|Name=XLOC_044285|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3612bp|location=Sequence derived from alignment at sc0000020_pilon:1091531..1095142- (Clytia hemisphaerica_ch_hm2_pilon)
AGGATATGGTTGGTGGGTTTTGTTCTTTCGTCGTTTGTTTTCTATCTGGA
ATGTCAACCAATATCCGCAGAGCTACAGAATGGTAAGTGAAACAGCCAAT
TATGAGAGGGATTTTGAATCTTTTGAAAGAATATGAAATTGAATAATACA
AAATAAGTAGGAGGAAAATAAAAGGAGTCCCCCACCCAAGCGGCATCCCT
CATTATGCCAATTTTTTGGTCTTATCAAGAAAATTTTGCTTTCGCAAGAA
TTAACTTTCGCTTTTCAAATTACTTTGCGAGAAAAGAACTTTTACATTGA
TTTTCGTTGAAGTGTCCAAAAAGTACTCCAGTTAGGTTGTATAAGAGGCG
ATTTCACAAAAAGGGTAGATTTAAAGAATTTTTTCGCGGCAATTAACTTT
TGCGAATTTGCCCGAATTGCCCGAAAAATTTCTTCCCCTAATTAAATAAT
AAGCGGAGAAAGAACAAAGGTCGTTCCTGTTTGAATTTAGTGATCTTCCA
TCCCCCCTGACCCTGTTAGATATTTCAACCTGAAAAGAGGGATCTTGAGC
ATTTTTCCGGAGTATATCCCCTCCCCTTGGAGAGGTGCAGTAGTGTAGTG
GTCATCGTTCTTGACTTCCACGCTGGAGGTCACTCTGATACAAGAGTATG
GGGAAATATGCTGGACATTGAATGTGGTGTAGTCATGGTACTCATATGTT
CAGTACCTGCGAAAACGCAAGGTTCTCCCGTACTGTTCAAGTATCATCAT
CGATACAGCATGGCTCTGATGTGTCGCGGGCACAGAGTAGAATGTCTGAT
ACGCGCTGTGATTTCGCTATCTAGGAGTAGGAAACTATCCCGGGATAGGG
CCCGGTCCGATGATATCGGAGGGTCAGCTTCTCTTCTCTCAGCTTCTCCC
TCTTCTCTATCCCCCCTTTATGAAAGGCTAAAAACTTAACCATGTCTGAC
TGTAAAGAAATAAATAGATCATACAAATAAAAATATTATCTATCGACAGG
AGACACGATAAACAATAACAATGTGGAGGAGAATAACGAAAGGACGTTCG
AGCATCAAGACGAATTAGGATCTGGTGGAGTTGACAGTTCTGGCGATCCT
TTTGTTGATGGAGAATCGTTAGTGATTGTTGATGAAAAGAAGGCGTTATC
AGCTGGTGGCGATGGAAATGTTGCTGGTGGAGAAGATGAAGAAGAAAAAG
AAGTTGATTTCAATACTGGTCAAAAGGTATTATATCGTCGCTTCATTCTT
ATCGGCATTCCTTTTTGTATAAGAGCAAGATTTAGTTTCAGAAATCATGT
TCCAAGTAACCCAACACGCTTTTCTCAGTGTCCAAGTGGAATTTGAAATA
TCTCCCCTCCCCGGTGACTATGATCTAGATGAGATTACAACAGGGGAGAG
AGGGTTAGGCTGATTCTCAAACTAGGGTTTAAATATCACACTTTTTTTAG
GCCGTTTACCTGGATATACTTGTGCTGATTTAGAATTTTTTTCCATCGAA
GCTTAGAGACTTACCAATCTTTCATTTAAAGCTGTCATTTAACTTTTCCA
TCATTTTACTACCAAATAGGAACCTACTGATGACAATACCAAAACATACC
AACCTGAACAAGAAGAACTACAGCCACAACAACCAACCAGCCCACAGCAA
CCACCAATTGAGTCTATTCATCAGCAACCACTTAAACCGCAAGTTTTTGA
ATCACAACAAAACAATGAGAAGGAATTCCAAATGAAATTAAGTAAAATTA
AGAAGATTCCTTCCAGTAAATTCGTCGGTTCTAAAATTTCTCATAATCAA
AATTTTGTGTTAAATAAAATACAAAATCCAGCCTCGTTATCAATCAAGTT
CATAATAAAGCCATTGGAGAGCTCTTCTGAAACACCATCCAGAATAGAAT
CTCTCGTGGACCAACCAACGTTGACTGAAGCAGACGATGGCTCGGGAAAA
AGGGATGACATATCAACTGTTATAGTTAAAGAAGAGGAGGTGTCAGGAAG
CGGAAGTGGTAGCGAGGGGACAATGGCTTCAGGCAGTGGCGAACAAGAAC
TTGTACAAACAGATGATACGGCTGACTCACAGAAAGTGTTGACTTTCACT
CTGAAAGCTGTATCGCATCCGTTGAGATTGAAAAATGAAACTTTGCCTTC
CAAGGCTAAAGATTTGGTAAGAAACTCTTCTTCTGATACATGATGAAATT
TTCAGCATTTTATTCTTGAAACTCTTGATATCTTATCATTCAATAGTCTC
TTTTTCACACCCCTTTCTCACAGATCCAGGTGGGAACCCTTCCAGCTGGA
AAAAATTGGCCAAAATATCGTCCCCAGTGGAAAACAATACTCAAATTTTA
GTCCTTACTGACAATCACCAAATAAAAAAATGCTCACTTTAAAATATTAT
AACCAAATGAATCTTCTGACTCGATAACAATAGATTTCAAATCCCCAGTC
TTGAGAATATCACTTCCATTGAGTTTTAGCCCATTATTGGCTAAAAACAT
CCTACCGGGTCAGTGAGACGAGAATGTTTTCTTTCGAAGTGTTAACAAAA
GAAGATCAACTACAGCTAATGCTAACGCATCTGATCGCTTAGTAAAATCC
TACCAAACTTTTTTCCATTAGATTGCTCCAACGAATTCAAATAAACCGCA
AGCCTTTCTAAAACTATACCACAATGAGTTTTCCAAGAAGGAATTCGTTC
CTGCAAGAGAAATGAATCTACCAGGAAAGCAAGAGACCATCCAATCGCCA
AAACAACTACAAAATCTCTTCTACACAAGTTTGAATGCTGATTTTCATGC
TAAACCTGAATTTGGTTCAAATTACGACCCCTGGTCAAATGCTGATATCC
AGAGTCTTCAGGAAATGGCGAGCACAGCTTTAGAAGAGAATAAGGAGACA
ACGAAACAGGACTTGGCAAGCCGTAGTAAATTTGGCCAACCATCTGCGAT
AACCAATAATGACCAGATGAACGCATTGATGTATCGCGATCAGCAGTCTT
ACTTGGGGAAGGTTGGAAAAGCGACAGAGTTAGAAGAACAAGCTGAAATC
ACCAATTTTAAGTAAGTTCATTTTCTTCTTCTGTTGCTGTCTTATTGAAT
CCACGACCTTGCCAAAGTTACACAGTAGATTCTCTCTAGCCCAAACCTCT
CTAAGTCCAACGTCTCTTTAACATGTACAAATCTGATGATCCATGAAGAT
TTCCTGATAAACTTTTATAAAACTTATTTGATCAATGTTTAGAACACAAA
CTGCAGAGCCTCCTGTCGGTGATGTGGTTGGTAAGTTTGGAAAGCCAACA
ATGGGAGAAATGGAATCTGAACTGTCAAGCATGCCACCATCTTCCATGTT
TGGAAATGCTGGTGAAACGTTACCGAAGAATCAGAAGATATTCCACAAAG
ATAATGGAAAAGGATCACAAGATTTCGAGTCAATGGTAGAAGGGTTTGCA
AGTGAAGAATTACACCAACTGGAACATCAGAAGGTAGCTTCAAAGAATAA
CGTATTTATTGGTGACTTGCCAGCAATGAACGAACAACAAACTAAACTGT
CACAAAGTGATTCTGCATCATTAATGGAGGTTCCTGAACATTTACCGACA
GATCAGGAGACT Coding sequence (CDS) from alignment at sc0000020_pilon:1091531..1095142- >XLOC_044285 ID=XLOC_044285|Name=XLOC_044285|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3432bp|location=Sequence derived from alignment at sc0000020_pilon:1091531..1095142- (Clytia hemisphaerica_ch_hm2_pilon)
AGGATATGGTTGGTGGGTTTTGTTCTTTCGTCGTTTGTTTTCTATCTGGA
ATGTCAACCAATATCCGCAGAGCTACAGAATGAGGATATGGTTGGTGGGT
TTTGTTCTTTCGTCGTTTGTTTTCTATCTGGAATGTCAACCAATATCCGC
AGAGCTACAGAATGGAGACACGATAAACAATAACAATGTGGAGGAGAATA
ACGAAAGGACGTTCGAGCATCAAGACGAATTAGGATCTGGTGGAGTTGAC
AGTTCTGGCGATCCTTTTGTTGATGGAGAATCGTTAGTGATTGTTGATGA
AAAGAAGGCGTTATCAGCTGGTGGCGATGGAAATGTTGCTGGTGGAGAAG
ATGAAGAAGAAAAAGAAGTTGATTTCAATACTGGTCAAAAGGAGACACGA
TAAACAATAACAATGTGGAGGAGAATAACGAAAGGACGTTCGAGCATCAA
GACGAATTAGGATCTGGTGGAGTTGACAGTTCTGGCGATCCTTTTGTTGA
TGGAGAATCGTTAGTGATTGTTGATGAAAAGAAGGCGTTATCAGCTGGTG
GCGATGGAAATGTTGCTGGTGGAGAAGATGAAGAAGAAAAAGAAGTTGAT
TTCAATACTGGTCAAAAGGAACCTACTGATGACAATACCAAAACATACCA
ACCTGAACAAGAAGAACTACAGCCACAACAACCAACCAGCCCACAGCAAC
CACCAATTGAGTCTATTCATCAGCAACCACTTAAACCGCAAGTTTTTGAA
TCACAACAAAACAATGAGAAGGAATTCCAAATGAAATTAAGTAAAATTAA
GAAGATTCCTTCCAGTAAATTCGTCGGTTCTAAAATTTCTCATAATCAAA
ATTTTGTGTTAAATAAAATACAAAATCCAGCCTCGTTATCAATCAAGTTC
ATAATAAAGCCATTGGAGAGCTCTTCTGAAACACCATCCAGAATAGAATC
TCTCGTGGACCAACCAACGTTGACTGAAGCAGACGATGGCTCGGGAAAAA
GGGATGACATATCAACTGTTATAGTTAAAGAAGAGGAGGTGTCAGGAAGC
GGAAGTGGTAGCGAGGGGACAATGGCTTCAGGCAGTGGCGAACAAGAACT
TGTACAAACAGATGATACGGCTGACTCACAGAAAGTGTTGACTTTCACTC
TGAAAGCTGTATCGCATCCGTTGAGATTGAAAAATGAAACTTTGCCTTCC
AAGGCTAAAGATTTGGAACCTACTGATGACAATACCAAAACATACCAACC
TGAACAAGAAGAACTACAGCCACAACAACCAACCAGCCCACAGCAACCAC
CAATTGAGTCTATTCATCAGCAACCACTTAAACCGCAAGTTTTTGAATCA
CAACAAAACAATGAGAAGGAATTCCAAATGAAATTAAGTAAAATTAAGAA
GATTCCTTCCAGTAAATTCGTCGGTTCTAAAATTTCTCATAATCAAAATT
TTGTGTTAAATAAAATACAAAATCCAGCCTCGTTATCAATCAAGTTCATA
ATAAAGCCATTGGAGAGCTCTTCTGAAACACCATCCAGAATAGAATCTCT
CGTGGACCAACCAACGTTGACTGAAGCAGACGATGGCTCGGGAAAAAGGG
ATGACATATCAACTGTTATAGTTAAAGAAGAGGAGGTGTCAGGAAGCGGA
AGTGGTAGCGAGGGGACAATGGCTTCAGGCAGTGGCGAACAAGAACTTGT
ACAAACAGATGATACGGCTGACTCACAGAAAGTGTTGACTTTCACTCTGA
AAGCTGTATCGCATCCGTTGAGATTGAAAAATGAAACTTTGCCTTCCAAG
GCTAAAGATTTGATTGCTCCAACGAATTCAAATAAACCGCAAGCCTTTCT
AAAACTATACCACAATGAGTTTTCCAAGAAGGAATTCGTTCCTGCAAGAG
AAATGAATCTACCAGGAAAGCAAGAGACCATCCAATCGCCAAAACAACTA
CAAAATCTCTTCTACACAAGTTTGAATGCTGATTTTCATGCTAAACCTGA
ATTTGGTTCAAATTACGACCCCTGGTCAAATGCTGATATCCAGAGTCTTC
AGGAAATGGCGAGCACAGCTTTAGAAGAGAATAAGGAGACAACGAAACAG
GACTTGGCAAGCCGTAGTAAATTTGGCCAACCATCTGCGATAACCAATAA
TGACCAGATGAACGCATTGATGTATCGCGATCAGCAGTCTTACTTGGGGA
AGGTTGGAAAAGCGACAGAGTTAGAAGAACAAGCTGAAATCACCAATTTT
AAATTGCTCCAACGAATTCAAATAAACCGCAAGCCTTTCTAAAACTATAC
CACAATGAGTTTTCCAAGAAGGAATTCGTTCCTGCAAGAGAAATGAATCT
ACCAGGAAAGCAAGAGACCATCCAATCGCCAAAACAACTACAAAATCTCT
TCTACACAAGTTTGAATGCTGATTTTCATGCTAAACCTGAATTTGGTTCA
AATTACGACCCCTGGTCAAATGCTGATATCCAGAGTCTTCAGGAAATGGC
GAGCACAGCTTTAGAAGAGAATAAGGAGACAACGAAACAGGACTTGGCAA
GCCGTAGTAAATTTGGCCAACCATCTGCGATAACCAATAATGACCAGATG
AACGCATTGATGTATCGCGATCAGCAGTCTTACTTGGGGAAGGTTGGAAA
AGCGACAGAGTTAGAAGAACAAGCTGAAATCACCAATTTTAAAACACAAA
CTGCAGAGCCTCCTGTCGGTGATGTGGTTGGTAAGTTTGGAAAGCCAACA
ATGGGAGAAATGGAATCTGAACTGTCAAGCATGCCACCATCTTCCATGTT
TGGAAATGCTGGTGAAACGTTACCGAAGAATCAGAAGATATTCCACAAAG
ATAATGGAAAAGGATCACAAGATTTCGAGTCAATGGTAGAAGGGTTTGCA
AGTGAAGAATTACACCAACTGGAACATCAGAAGGTAGCTTCAAAGAATAA
CGTATTTATTGGTGACTTGCCAGCAATGAACGAACAACAAACTAAACTGT
CACAAAGTGATTCTGCATCATTAATGGAGGTTCCTGAACATTTACCGACA
GATCAGGAGACTAACACAAACTGCAGAGCCTCCTGTCGGTGATGTGGTTG
GTAAGTTTGGAAAGCCAACAATGGGAGAAATGGAATCTGAACTGTCAAGC
ATGCCACCATCTTCCATGTTTGGAAATGCTGGTGAAACGTTACCGAAGAA
TCAGAAGATATTCCACAAAGATAATGGAAAAGGATCACAAGATTTCGAGT
CAATGGTAGAAGGGTTTGCAAGTGAAGAATTACACCAACTGGAACATCAG
AAGGTAGCTTCAAAGAATAACGTATTTATTGGTGACTTGCCAGCAATGAA
CGAACAACAAACTAAACTGTCACAAAGTGATTCTGCATCATTAATGGAGG
TTCCTGAACATTTACCGACAGATCAGGAGACT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020_pilon | genome | sc0000020_pilon:1091531..1095142 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1351-1719:370 |
| Aaloc | 910-1347:992 |
| Aaloc | 313-909:2044 |
| Aaloc | 88-312:2612 |
| Aaloc | 4-84:3613 |
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