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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000176_pilon:652398..655467- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044234 ID=XLOC_044234|Name=XLOC_044234|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3070bp|location=Sequence derived from alignment at sc0000176_pilon:652398..655467- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGTTTCAAGTATGTTTCAGATGTTTATTTTGCTATTTACGTTTGC
AATTCAAGTAAATCGTGTACAAGCCTGTGAAACAACACAACAAAGTATAT
TCTATCAAAAGAAGGATAACTTTGAGTCAGCTCAAAATGAAATTTGTACC
TTACCATATAAAACTAAAATTATAGTTTACTCTATAATAGAATGTCTCTT
AATATGTGGAAGAACCAAAACAACAAATGCTTTTATAAGAAATTCAGATA
ATGGTCAAAAGAAATGTATTTGTACAAACAAAGCCTGTTTCAAAACAAAG
TATACGGGCTATAGCAAAATTTTAAATGGTGGTATCGATCAACCAGATTC
CACAATTCAAAACGCTTCACCTGTGACTACGGCAGCATTGTTAACGTCGT
TAGTTACAACGACATCAGCAAGTCGAGAGATAACGACAACAACGAAACTG
ACACCCACTACGACAAGCTATTTGACTACAGCAACGTTTGCTACAATAAT
GCCAGATTCTACAACAATATCAACGAAAAGCTCTACAACCACGTCAGCCA
TCGCTACAAGATCATCGTCAACGTCGTTAGCTACAACGACAGCAGCAAGT
CAAGAGATAACGACAACATCAAAACTGACACCCACTGCAACGAGCTCTTT
GACTACAGCAACGTTTGCTAAGACAATGCCAGATTCTACAACAATATCAA
CGGAAAGCTCTTCAACCACGTCAGCCATCGCTGCAAGATCATCGTCAACG
CCCATAGTTAGCACAGTAGCAGTAGATCAAGAGAAAGCGACAACAACGGC
ACTGACGCCCACTGCAGCGACGCCTACTACGACAATACCAGATTCAACAA
CTACAATAACGGAAAGCCCTTCAACAACGCCCGCCATCGCAACAATACTC
ACCACCACAACACCCACAACCACCCTACCACTGACATTTCGTAAGCAATC
TTTCAACTGATTACTAACTTTTTTTTGATAAACTTTTTTTTTATAAGAAC
CAATAAAATTTTGCTGAGGCTTGGTTGTTCTTATTTTTCTAGCAATTTGA
GCCTTAAATTGTTCTTGTCCTATTCTGATTGGTTGTAATTGAGGTATTTT
AGGCTTTTACCCAATTTTTACTACTTTGACGCCTCTAAATTCTTGAAATT
CAGGACTTGAAGGCTCAGCATATTGTTCTTAAATTGCTCTTATTTTTGGC
GATTTTGGAACCTCATTGTCCTTATAAAAGAAAAAATGTGTAGTAAAGAT
GTACCTTTTTCGTAACTATTTGTCGGTGGACTGAAATTAAATTTTTTCCC
TTAGTGGGACTCCTCACCATTTGTCTAGGTACCCTCCGGGATTTAAGACA
AGTGTAAGTCATTTGACCCGGGGTGGGGGGGGCACTCATATGGTCCGACC
CACGGGATGAGCCACCCTTAAGGGTAGGTTTTTCGGGACCCTCGAAATGC
ACTGTAAGAGTATACTTTTGGCGGCACATGCCGTCGTTTAGAAATCGAGT
GCCCCCCCCTGGTTTAGTCAAATGCTACTGCTGCAAGGGTTGAAAATATA
AGCTTCTATGGTGTCCTTTATTTTCTAATTTTTAGCGAGTGTCCACATTA
TCACAACACATTTCACCCGTTTCAGTCCAAATCATGGAAAGACACATTCT
TTAATTTACCACAATGTGAAATGTCCGACTGACAAAGCTTTGGTTGGATT
CCGCCTTCAAGAGAATGACCATGGCCAATTGCGGTGAGCATTAACCTTTT
TCATAACTTCTTGCTGATCTTTGCAATTTTTGATGACGCTGAGTCCAGTG
AAGTAGACTAGAAGCATTTGACAAAGAAAGAAAAACACTAAAAATCCAAA
AAAAACTACTTAGGGGAAAAATATGATTAAGAATGGGAAACAAACATGAT
TAACCAATTTATTAAAGGATTGAGGTCTTTCAAATAAAAACATTGCTTCA
TCCTATTTTTACCCTTCAAAAAAAACTTAAATCTGGCACACTGTTTTACA
GTCCGCCTAAACAAAAGCATATTACCATATACTACCGATCCACTTAATCG
TGGCATCCAGTCTATAAAAATAGCTTTAAGTGGACCCCGGGGTAACTATT
TCATAGAATTCATGCATCTGTTACATAAGCTCTGAATTAGCCTATTTTAT
AGGATTCGTGTTTTTAGTACATGACATTTTTTACATTGCAGTAATCGAAT
CTTTATGGTTAAGCACTATTTTGCGAATGTAGACTTTAAGTTTTGTAAAA
GCAACAGCAATAGAAAAGAGCTTATCCAGACGATGTCAATCGAACGGAAT
CGACGATCGAACCAGTCGAACAACAATCGAACCAATCGAATATTACCCAG
AATTTTGACGTTCGATTGAGATTCGATTGCGTTCGACAATCGAATTTTAA
TCGGTCGATTGTGTTCGATTTGGTTCGATTGGTTCGATCGTCGATTCCGT
TCGATTGAGATCGTCTGGGCTTATGAATACCCAAGTCAATTGAATGATGA
CAAAAAATCAATTTTTTCAACATTTTTCACAAATGGAAATCTGCATAGAT
TTGTGCATTTCATCCTTTAAATTGAATAGAAATAGCATGTAACAGATGCA
CGAATCCTAATTCTAATTTGAAGATATTTCCGTTTTCTTAATATTCATTT
TTTTATAGGTATGAATACGACTGCGTTGAAATACCGAGCCAATGTATCGT
TTACTCAAAGTCCAATCCAACGCAAGATAATGCAAATGGGAAAATAATCT
TTCTTGATCGATTACGTGTCTCTTGTGATAGTAACGATTTTATGTTGAGC
CACCAGTATCGGAGAAGTGGGAGGCAAAGTTGGTACAATTTTAATTGCTG
CCATATGCAAAACCAAAATCAACTTCAATGCTCAAATCTGGATACATCAC
TTACACAACTCCCTTCACCTGGAACACAGACAAATTTACAGATGCTTACT
GGACAGGATGTCACATGTCCTACAGGTTCAATCATATCATCTTTTCGATT
GACTCGTTATCCGGCTCAGGGAAGCCAACTACGATACAAAATCAAATGTT
GTTCACTCGCCAACTATTAG Coding sequence (CDS) from alignment at sc0000176_pilon:652398..655467- >XLOC_044234 ID=XLOC_044234|Name=XLOC_044234|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3000bp|location=Sequence derived from alignment at sc0000176_pilon:652398..655467- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGTTTCAAGTATGTTTCAGATGTTTATTTTGCTATTTACGTTTGC
AATTCAAGTAAATCGTGTACAAGCCTGTGAAACAACACAACAAAGTATAT
TCTATCAAAAGAAGGATAACTTTGAGTCAGCTCAAAATGAAATTTGTACC
TTACCATATAAAACTAAAATTATAGTTTACTCTATAATAGAATGTCTCTT
AATATGTGGAAGAACCAAAACAACAAATGCTTTTATAAGAAATTCAGATA
ATGGTCAAAAGAAATGTATTTGTACAAACAAAGCCTGTTTCAAAACAAAG
TATACGGGCTATAGCAAAATTTTAAATGGTGGTATCGATCAACCAGATTC
CACAATTCAAAACGCTTCACCTGTGACTACGGCAGCATTGTTAACGTCGT
TAGTTACAACGACATCAGCAAGTCGAGAGATAACGACAACAACGAAACTG
ACACCCACTACGACAAGCTATTTGACTACAGCAACGTTTGCTACAATAAT
GCCAGATTCTACAACAATATCAACGAAAAGCTCTACAACCACGTCAGCCA
TCGCTACAAGATCATCGTCAACGTCGTTAGCTACAACGACAGCAGCAAGT
CAAGAGATAACGACAACATCAAAACTGACACCCACTGCAACGAGCTCTTT
GACTACAGCAACGTTTGCTAAGACAATGCCAGATTCTACAACAATATCAA
CGGAAAGCTCTTCAACCACGTCAGCCATCGCTGCAAGATCATCGTCAACG
CCCATAGTTAGCACAGTAGCAGTAGATCAAGAGAAAGCGACAACAACGGC
ACTGACGCCCACTGCAGCGACGCCTACTACGACAATACCAGATTCAACAA
CTACAATAACGGAAAGCCCTTCAACAACGCCCGCCATCGCAACAATACTC
ACCACCACAACACCCACAACCACCCTACCACTGACATTTCATGATGGTTT
CAAGTATGTTTCAGATGTTTATTTTGCTATTTACGTTTGCAATTCAAGTA
AATCGTGTACAAGCCTGTGAAACAACACAACAAAGTATATTCTATCAAAA
GAAGGATAACTTTGAGTCAGCTCAAAATGAAATTTGTACCTTACCATATA
AAACTAAAATTATAGTTTACTCTATAATAGAATGTCTCTTAATATGTGGA
AGAACCAAAACAACAAATGCTTTTATAAGAAATTCAGATAATGGTCAAAA
GAAATGTATTTGTACAAACAAAGCCTGTTTCAAAACAAAGTATACGGGCT
ATAGCAAAATTTTAAATGGTGGTATCGATCAACCAGATTCCACAATTCAA
AACGCTTCACCTGTGACTACGGCAGCATTGTTAACGTCGTTAGTTACAAC
GACATCAGCAAGTCGAGAGATAACGACAACAACGAAACTGACACCCACTA
CGACAAGCTATTTGACTACAGCAACGTTTGCTACAATAATGCCAGATTCT
ACAACAATATCAACGAAAAGCTCTACAACCACGTCAGCCATCGCTACAAG
ATCATCGTCAACGTCGTTAGCTACAACGACAGCAGCAAGTCAAGAGATAA
CGACAACATCAAAACTGACACCCACTGCAACGAGCTCTTTGACTACAGCA
ACGTTTGCTAAGACAATGCCAGATTCTACAACAATATCAACGGAAAGCTC
TTCAACCACGTCAGCCATCGCTGCAAGATCATCGTCAACGCCCATAGTTA
GCACAGTAGCAGTAGATCAAGAGAAAGCGACAACAACGGCACTGACGCCC
ACTGCAGCGACGCCTACTACGACAATACCAGATTCAACAACTACAATAAC
GGAAAGCCCTTCAACAACGCCCGCCATCGCAACAATACTCACCACCACAA
CACCCACAACCACCCTACCACTGACATTTCCGAGTGTCCACATTATCACA
ACACATTTCACCCGTTTCAGTCCAAATCATGGAAAGACACATTCTTTAAT
TTACCACAATGTGAAATGTCCGACTGACAAAGCTTTGGTTGGATTCCGCC
TTCAAGAGAATGACCATGGCCAATTGCGCGAGTGTCCACATTATCACAAC
ACATTTCACCCGTTTCAGTCCAAATCATGGAAAGACACATTCTTTAATTT
ACCACAATGTGAAATGTCCGACTGACAAAGCTTTGGTTGGATTCCGCCTT
CAAGAGAATGACCATGGCCAATTGCGGTATGAATACGACTGCGTTGAAAT
ACCGAGCCAATGTATCGTTTACTCAAAGTCCAATCCAACGCAAGATAATG
CAAATGGGAAAATAATCTTTCTTGATCGATTACGTGTCTCTTGTGATAGT
AACGATTTTATGTTGAGCCACCAGTATCGGAGAAGTGGGAGGCAAAGTTG
GTACAATTTTAATTGCTGCCATATGCAAAACCAAAATCAACTTCAATGCT
CAAATCTGGATACATCACTTACACAACTCCCTTCACCTGGAACACAGACA
AATTTACAGATGCTTACTGGACAGGATGTCACATGTCCTACAGGTTCAAT
CATATCATCTTTTCGATTGACTCGTTATCCGGCTCAGGGAAGCCAACTAC
GATACAAAATCAAATGTTGTTCACTCGCCAACTATTAGGTATGAATACGA
CTGCGTTGAAATACCGAGCCAATGTATCGTTTACTCAAAGTCCAATCCAA
CGCAAGATAATGCAAATGGGAAAATAATCTTTCTTGATCGATTACGTGTC
TCTTGTGATAGTAACGATTTTATGTTGAGCCACCAGTATCGGAGAAGTGG
GAGGCAAAGTTGGTACAATTTTAATTGCTGCCATATGCAAAACCAAAATC
AACTTCAATGCTCAAATCTGGATACATCACTTACACAACTCCCTTCACCT
GGAACACAGACAAATTTACAGATGCTTACTGGACAGGATGTCACATGTCC
TACAGGTTCAATCATATCATCTTTTCGATTGACTCGTTATCCGGCTCAGG
GAAGCCAACTACGATACAAAATCAAATGTTGTTCACTCGCCAACTATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000176_pilon | genome | sc0000176_pilon:652398..655467 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1090-1500:412 |
| Aaloc | 943-1086:1484 |
| Aaloc | 1-939:3071 |
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