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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000176_pilon:636139..640043- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044232 ID=XLOC_044232|Name=XLOC_044232|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3905bp|location=Sequence derived from alignment at sc0000176_pilon:636139..640043- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATACGAGCTGTAACCTTTGCTCTCCTAATGTAAGTTTTGACTTTTTT
AGTAACAAATACATCATTTTCGATGTTTTATCGCGAAAACGTAGGCTTCT
GCTCATTTTCTAGCAAAAAGAGTTTCTTATATGGGAAGTATGTCCATAGA
GGTCTGTGACTACTTTATCGGAAATGTAGCTATACTGATAAATTTTGATA
TTCGTCCATCTTAGACAAGAATTAAGACTAAAGACAAGTCTTCTTGTTAC
TGAATTCTCGGGTCGTATCTTGCTTTATTATCTTCATTTAGAAGTGTTTT
TTTACTTCCTAATGCACAAATATACACCCCTGTCTCAGATCCCCGGTGAA
AACCTTTATCGAGATCCCAATGGGGACAGAAATTATATTGTTCTTTTGTT
TCGGAGTGCAATGTCTTTCATCAATTTGGATATGAACCAAGTTCATTTTC
CTAGACTTTAATTGCGGGATATTTTTTCACTGCCACCGGGGACCGAACGT
TAGCTAAATTTCCCAGCGGGGTGGGGGTTTCCAGTGGGTTTGTGACACAG
TAGTAAACCGTTACTTTGTATAATGCCGACACACCTTACAATTCCATTAT
AGCAACTATCTGGTCTACAAAATAGTTATCAGTGATTTTTAAAGAGCTTA
CTCAAAAGATTTTATTTATAAACATTTAAAAGACCACCATTATGGTCAAA
ATCTATTGAGAATTTAGCTTATTTCCTCGTTTTTCGAAATTCGAAGTTAG
GGCAAAAAAGTTGATTTTGAGCCATATTTAGTCGAATATTTAAATTTGGC
ACGGGTTTATGGACTTCTGGGCTATACTCTGAGCCTTATCGGACCATTTT
TAAACTTTTGCATTATCCCAGATCCTAAGATCTTAAGTCTAGTGTTAAAA
TTCAGAGTTAAAACTCTACCCTTCCAACCTAACTTAGAACACTTCCAAAT
CGTTTGTGGTTTTGAAAATTCGTGGGAATTTCCCTTTTGAAATATTACGA
CCATGATTGCAGATTAGACAAGGTGTGTCGGCATTACGCTAAGTTACTAT
AATATCTATCCATATAGAGTGATGAAAAAAATAAGATTTTGACCTAAACT
TTGTGGATATTCTATATACTAAATTTTTATATTCTTATCTTTGATTTTCT
ACTCATTTACTTCTTACTTCAGAGCGCTTACAAGTGCAACGTCATTGAGT
GATTATGATACAACTATCAATGGAAATACACTTGATGGCAAATACATTCA
TTTTCAATCTTTGAGATACCCAGAAAGATGGGTCCGTGGTTGGTATCAAT
CAACAAATAAGTTGAAGATCAAAGAATTTACCGAACGACAAGTTTACGAT
GAGTCTGTTACCCAATGGAAAGTAAATACACATTTTTATAAGAGCATAAT
TTATAAGAACATAAAGCTACGAAAATATTAAGAGCAAAGCAGAGACAATT
TAAGGCCGAGTTTCTAAGGAAATCAGGAAATCGCACAGAAATACTCAGAA
AATGGTCACTTAAAATACTTTTAGGCTTGGAGCTAAATAACAATTTTATG
GAGTATTCTTATTTTTTTAATTGGATTGTGATTTTCATGAATAAGATATT
TTTCTTGCGAGAATAGATAGTCTTCAATCCTTCCATCTAGAACAAAATTG
TCTTCTTTATTTCTCAGGTCAAACATCTTGGAAACAACGTACTTGTTTTA
GAATTCATGAGAAGACCAAGTCGTTACATTCGAATGAGAGACAATGATAA
AGATATGGAACGATCTGAAACTACTTATCCTGATGACAAAGTATGTTAAT
ACTGAAATCGACTATAAAAATACGTATTTACCTAATTGATAAAGAAAATT
AAAGCTTTACAGACCCGAATGACCCCTAATTCAGCCTTGTGTTGGGTTGT
GTTATCTAATTCCTACATAGCCGGTTTTAGAACTTGTCGTACTTATCAGA
GGAAGAGATTTATAATTGTAATTTCATTGTCTTTGTCTTTGTTTCATTGT
CATTGAGCGTTGCACTCCTTTGCATGTTCCCGACATACTTGCTCTATTGT
CTTAAATCCGCTAGTGTCCTATACCAAACTTTTGTTGTTTTTTGGGACAA
TACACCTTCTCGAAATGCTCAAAATAATTCTGAACCTCTTTTCAAAGTAC
TGTTGCCAAGAAACTTTAAAATCATCAGACATAATTGATGTTTACTGTGA
TTTTTGGAAAAACATATTACATGTTTACATGTCATTTGAATTAATTATTC
TATATTCGAAAACAAGGTCTGCAATGCTGTTGATTTATCTGGAGAAGCGT
GTCCCCTCTAATTACAACGGCTCGTCGCATATTTGAAAAATAAATTTCTT
AAGACAAAAAAAACTTATCTAAGAACGATGTTTTCATTCCTATTCGTAAC
CTCCTATTGCAGAACTGGGCAAAATGGAAGATCCTCTGTACAGACACAAC
CATGGATGACTGTATTATCCAATCACAAAAAGATACCAACAAATACTTCG
ATTCTGATAGCAGCAAGAAGTTACAAAGAAGTAGCTTTGGCGATCCTAGA
TCAAGATTTCGAGTTCTTGCACCAACACCTAGTGAATATTACGCGTGAGT
TGTTATGACCTTCTATATGAAGTTTTGTGTCGAGAAAGCTTTTTTATGTG
ATGGTAACGGCGGCCCGTTATAGACAATCTTTCAATCTTTCCCGCGTCGA
AAAGTTTTTGCGTAGGTCTTTTTGTCATTTTAGGCAAGTTTTTACGTATT
TGAGGATTCTGCATAGGTCTTTTTGTCATTTTAGGCAATTGCATATTTAA
GGATTTTGCATAGGTCTTTTTATCAGTTAAAAGCCTTTACAATTGATGAA
GTTCTTTGATTAAAAATTAGCAATTGCGTTTTGAAAGGGTCCCAAAAAAA
ACGAAATATTAAAAATCGACTCCGTCATTAGGGTCATAAAATCTAGTGAT
TTTAAGCTGAAAATTAGAAAAAAGGCTCTTACAAAGGGTCGCAAAAACGT
CGATATTCAGTCTCTCAAACGCTCGCAAACCAGGTACCCCCCCCCCAATG
GTGGTTATATTTCAACACCAAAGTTAAATCTAAATTTTTTTATTCTTTAG
AAATATTCTTCTTTTCTTTCCAGATCGGTCTTGTCAACAGAAAACACTGG
CAGTGCAGATTTGCATAAAACAATTGTGATGTACGAAGGAATCAGTGAGA
CATCCTCAACAACTTTGACTGTTTCTGCTTCAGTCACGGCTGAAGTTCAA
GCCGCTTTTGGATCAGGTTCCGCCACATTGTCTACAGAATGGAGTGTAAG
TAATTTACCTTTTGCTCCTTTAAAGTAAATGCAGGCGGAGGGGCAGGGCA
CTTAGGCAAAATGGATATATCAATTAGGCATGTATCTAGAGGTATCTTTT
ACATACCTCTGAACTATCTGATGGCTATCCAATAAATAGTCAATTCTCTG
TAAACAATAGAAAAGTAAAAAAAAAACACGTAATATGAAAACATCCTTCC
AAGGGTCAAAGGATTAATTCTTTTGGAATTTGTGCAAATTTTTGCCTTTT
GATTAAGGGTAGGCTTTTTTTGGCATGTCATAAGCATAATATATGATTAT
TTAATACTTTATAGCAAACTACATCCAATACATGGACCAGTAGCACTACA
ATCTCAATCGATATTACTGTCCCTGCTGGAAAGAAAGTTAACGTCAAACA
ACTTGTTGGTGTGTACGGGCCGTTTAGTGTCCGATCGGCCCATTTCTTTA
TTGAAGAAACAGATGCTGCTACTGGGAAGAAGCGAGAAATTACTAAAGAT
GGTTCAAGTGTTCGAAAGTTGGAAAATAATGATAATGATACTTTATTACA
AACACTGGACGATGATATAGCAGGAAAGGTTTTGGAAGATTTTGCTGCTA
ATTAA Coding sequence (CDS) from alignment at sc0000176_pilon:636139..640043- >XLOC_044232 ID=XLOC_044232|Name=XLOC_044232|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1998bp|location=Sequence derived from alignment at sc0000176_pilon:636139..640043- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATACGAGCTGTAACCTTTGCTCTCCTAATATGATACGAGCTGTAACC
TTTGCTCTCCTAATAGCGCTTACAAGTGCAACGTCATTGAGTGATTATGA
TACAACTATCAATGGAAATACACTTGATGGCAAATACATTCATTTTCAAT
CTTTGAGATACCCAGAAAGATGGGTCCGTGGTTGGTATCAATCAACAAAT
AAGTTGAAGATCAAAGAATTTACCGAACGACAAGTTTACGATGAGTCTGT
TACCCAATGGAAAAGCGCTTACAAGTGCAACGTCATTGAGTGATTATGAT
ACAACTATCAATGGAAATACACTTGATGGCAAATACATTCATTTTCAATC
TTTGAGATACCCAGAAAGATGGGTCCGTGGTTGGTATCAATCAACAAATA
AGTTGAAGATCAAAGAATTTACCGAACGACAAGTTTACGATGAGTCTGTT
ACCCAATGGAAAGTCAAACATCTTGGAAACAACGTACTTGTTTTAGAATT
CATGAGAAGACCAAGTCGTTACATTCGAATGAGAGACAATGATAAAGATA
TGGAACGATCTGAAACTACTTATCCTGATGACAAAGTCAAACATCTTGGA
AACAACGTACTTGTTTTAGAATTCATGAGAAGACCAAGTCGTTACATTCG
AATGAGAGACAATGATAAAGATATGGAACGATCTGAAACTACTTATCCTG
ATGACAAAAACTGGGCAAAATGGAAGATCCTCTGTACAGACACAACCATG
GATGACTGTATTATCCAATCACAAAAAGATACCAACAAATACTTCGATTC
TGATAGCAGCAAGAAGTTACAAAGAAGTAGCTTTGGCGATCCTAGATCAA
GATTTCGAGTTCTTGCACCAACACCTAGTGAATATTACGCAACTGGGCAA
AATGGAAGATCCTCTGTACAGACACAACCATGGATGACTGTATTATCCAA
TCACAAAAAGATACCAACAAATACTTCGATTCTGATAGCAGCAAGAAGTT
ACAAAGAAGTAGCTTTGGCGATCCTAGATCAAGATTTCGAGTTCTTGCAC
CAACACCTAGTGAATATTACGCATCGGTCTTGTCAACAGAAAACACTGGC
AGTGCAGATTTGCATAAAACAATTGTGATGTACGAAGGAATCAGTGAGAC
ATCCTCAACAACTTTGACTGTTTCTGCTTCAGTCACGGCTGAAGTTCAAG
CCGCTTTTGGATCAGGTTCCGCCACATTGTCTACAGAATGGAGTATCGGT
CTTGTCAACAGAAAACACTGGCAGTGCAGATTTGCATAAAACAATTGTGA
TGTACGAAGGAATCAGTGAGACATCCTCAACAACTTTGACTGTTTCTGCT
TCAGTCACGGCTGAAGTTCAAGCCGCTTTTGGATCAGGTTCCGCCACATT
GTCTACAGAATGGAGTCAAACTACATCCAATACATGGACCAGTAGCACTA
CAATCTCAATCGATATTACTGTCCCTGCTGGAAAGAAAGTTAACGTCAAA
CAACTTGTTGGTGTGTACGGGCCGTTTAGTGTCCGATCGGCCCATTTCTT
TATTGAAGAAACAGATGCTGCTACTGGGAAGAAGCGAGAAATTACTAAAG
ATGGTTCAAGTGTTCGAAAGTTGGAAAATAATGATAATGATACTTTATTA
CAAACACTGGACGATGATATAGCAGGAAAGGTTTTGGAAGATTTTGCTGC
TAATTAACAAACTACATCCAATACATGGACCAGTAGCACTACAATCTCAA
TCGATATTACTGTCCCTGCTGGAAAGAAAGTTAACGTCAAACAACTTGTT
GGTGTGTACGGGCCGTTTAGTGTCCGATCGGCCCATTTCTTTATTGAAGA
AACAGATGCTGCTACTGGGAAGAAGCGAGAAATTACTAAAGATGGTTCAA
GTGTTCGAAAGTTGGAAAATAATGATAATGATACTTTATTACAAACACTG
GACGATGATATAGCAGGAAAGGTTTTGGAAGATTTTGCTGCTAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000176_pilon | genome | sc0000176_pilon:636139..640043 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 709-999:292 |
| Aaloc | 538-708:782 |
| Aaloc | 355-534:1494 |
| Aaloc | 232-354:2239 |
| Aaloc | 34-231:2733 |
| Aaloc | 1-30:3906 |
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