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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000002_pilon:2897979..2900598- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044230 ID=XLOC_044230|Name=XLOC_044230|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2620bp|location=Sequence derived from alignment at sc0000002_pilon:2897979..2900598- (Clytia hemisphaerica_ch_hm2_pilon)
TTGAGATCTGATGTTGAGAAGATATTGAGTCTAGCACCAAATGAAACCAA
GTTTTCCAACTCAAGTTTGATATGCCCTAAGGACAAGCAAAACGTACCAC
TGGCAACAACACTACTTTTCCAGTTTGTAAAAGCAGTTCGTGATGTTGAC
ACACTGAAAACAATCAACCTTCGAGTAGCTGATGTTTCTGAGGAACTTCA
TTTGCTGGGATTCATCATCGAAGCTGTTTTGGCATGTTATGCTACTCCAG
ACACAACAATTAAAAGTCAGCTTGAAAAGATTTCACTTGCTGCACATATC
TTGTTAATCCTGAAAAGAGAGTTAAAATCATTCCTCAACAACCAATTATA
CCAAGACCTGCAAGCAACATTTTCAGATGCCTTCTTTTGTGCTACCAAAT
GGAAATATCACCATCCTGACGTTCCCTTTTTTATCATGCTGTGTAGCAAT
GATACAATTGAACGTTTTTTTGGAAACCTTCGACTGAAATACAAACAATC
AGTTGTTGATAATTTGGAGTTGATCTATGCAACCAGATCAATTCAATTAT
GCACTGACATGATGTACAAGCACCCAAATTGGTTTGAAGAAAGCCAAAAG
ATCATGAAAAGGTTGTGTCTTGATTATTGCAGCCCTGGAAAATGGGACCT
TGAGAACTTAGTTCTTAAAGATGTTCCAATTGTAGCTGTCTGGAATCAAG
GAAGAGCGTTGGCAGAATACAAGTTTAATCAAATCCAGAAGTATCAAGGA
GAAGTGTGTGATTTCAATATGATTGCTTCGTTGGGTTACACCCTTCTTTG
TCCAAATGGAATTAAAATTGGGTTGACAGACACAGACACTTCTGAAGATG
ACAACATACATGTTAATGTTGGTGAGGGTAATACCATATTGGACGACACT
GATATAGAAGATCGCCCTGCAACATCACTCATTGACATGATACCAGAAGA
AACGACTCAAAAGCATGATGTTCAAACTGAGGTTTGTACTAATCCAGGTT
GAGATAAAAACAGACTCAAAATAGGCTACATTACACTTTGATTCTGTTTG
ATTCTGTTTTTCTTTCCAACCAGTTCAGCTCAATGTGATTACTCAAGTAC
CCTGAAATACCTGGAATACTGTAGATTATATATTTACTCTGATTTACTCA
GAATTTTATAGCCAATTTGTTTTGTTTCTCAGATTGATGGCTCTCGAGTA
TACAAAGCAACGATCGTAAAGAGCCTGTTCTCATCAAACCCTCTCTCAAA
GGACAGACTCCGTAAAGTCAGGGGGATGACTAAGTTTACTGAAGATGGCC
AAGAAGCAAGTGAAGCAATTGAGACATCAATAATGCCTGGGGATCCTATC
CTTTTCAATGTCAAGGGTACCTTGAAGATTGTGAAGATATCTGTTTTGAA
GAAGGCTACTCGCAAAGTGAAAATGGTATCTTGTGGTGATATTAGTAATG
AAAATGTGTATGTAAAAGGTGCGGAGATGGGATTGGATAAAGATGCAGAC
TGTTACATCTGGAATGGGTCACTTGGTGAGGTGATTGAAACCACTGGACC
ATATTGCTATGCCATCCAACCTGATTTGAAAACAATTAAAGGAAAACTGA
TGTTTACTTTTGATAAGCAACTGATACTAGACTTGAATGTTGGTTTGACA
ATCCAAAACCCAAATCCAGGTATTACACATTACATCACTATCATATTGGT
GGATATTTAGGATTTTAAAAATCTTCTTCTGTTCAAATGAAGTCAACTAA
TGAATGAATGAGGGATTAAAAGTTTTCTTCTTAGCTGTTTGTGTTGAGCC
TTAAACTGCATCTGAGCTTATGTGCCATCATCACAAAAACATTAGCATAA
ACCTTTTAAATCTCTACTAAATTTAGGTTCATCAAGCAGCACAAGTAGCC
ATTCAAACCAGAATTCAAGTAGTGCCACTGGTGCCAGTGAAAATACCAAC
TCGTCAGTAAAGAAAGCCTCTTCAGAGAAAAAAGGTGCTCTCAAACATGT
CGTTGAATGCTGCTTATGTAAAGAAAGGATTCCGCTAAGCAACATGAGAA
AGCACATAGGCATCCACATTACCAAGAGCCACATCTCTGGTTGCAACATA
TGTGGATTCTGTGGGAGAACTGTATGTAACACAAACCTGACAAATTCATC
AAAAAGAGGAAACGGTAAAAATATCTATTGGTATTTATTGATCATTTTTA
TATCTGTTCTAACCATTAACTTAATTCTCGTGGTCAGGTCTGGTTAGATT
CTTAGGTATTTTTGAGGTAATATCTCTGAGTTTAATGTAGTGCTAAAAAA
TACTTTGACCTGCTTTAACAGGGCTTTGACAGATCTTTGATGTTAATTAC
TCATTTGTTTTAGAACAATACAATCAGATGACAACAAACTGTAAATATAA
CTCCTTCATCCAGAGGAAACCCGTTCATTCCCAACGAAACCCGTGCTCAA
ATCATGTTGTGCCCTGCCCTGTCTGCAAAGTGGCCATTTGGACTTATAAT
GCACGTGCCCATTATGAAGGAGTACATCCAACCCATGGTTATAATGACTC
GGACTTTGTTTCACTTCAAGAACGGCAAAAAATGGCAAAAGCAGCAAAAA
TCAAAGCTACAAACACTTAA Coding sequence (CDS) from alignment at sc0000002_pilon:2897979..2900598- >XLOC_044230 ID=XLOC_044230|Name=XLOC_044230|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4026bp|location=Sequence derived from alignment at sc0000002_pilon:2897979..2900598- (Clytia hemisphaerica_ch_hm2_pilon)
TTGAGATCTGATGTTGAGAAGATATTGAGTCTAGCACCAAATGAAACCAA
GTTTTCCAACTCAAGTTTGATATGCCCTAAGGACAAGCAAAACGTACCAC
TGGCAACAACACTACTTTTCCAGTTTGTAAAAGCAGTTCGTGATGTTGAC
ACACTGAAAACAATCAACCTTCGAGTAGCTGATGTTTCTGAGGAACTTCA
TTTGCTGGGATTCATCATCGAAGCTGTTTTGGCATGTTATGCTACTCCAG
ACACAACAATTAAAAGTCAGCTTGAAAAGATTTCACTTGCTGCACATATC
TTGTTAATCCTGAAAAGAGAGTTAAAATCATTCCTCAACAACCAATTATA
CCAAGACCTGCAAGCAACATTTTCAGATGCCTTCTTTTGTGCTACCAAAT
GGAAATATCACCATCCTGACGTTCCCTTTTTTATCATGCTGTGTAGCAAT
GATACAATTGAACGTTTTTTTGGAAACCTTCGACTGAAATACAAACAATC
AGTTGTTGATAATTTGGAGTTGATCTATGCAACCAGATCAATTCAATTAT
GCACTGACATGATGTACAAGCACCCAAATTGGTTTGAAGAAAGCCAAAAG
ATCATGAAAAGGTTGTGTCTTGATTATTGCAGCCCTGGAAAATGGGACCT
TGAGAACTTAGTTCTTAAAGATGTTCCAATTGTAGCTGTCTGGAATCAAG
GAAGAGCGTTGGCAGAATACAAGTTTAATCAAATCCAGAAGTATCAAGGA
GAAGTGTGTGATTTCAATATGATTGCTTCGTTGGGTTACACCCTTCTTTG
TCCAAATGGAATTAAAATTGGGTTGACAGACACAGACACTTCTGAAGATG
ACAACATACATGTTAATGTTGGTGAGGGTAATACCATATTGGACGACACT
GATATAGAAGATCGCCCTGCAACATCACTCATTGACATGATACCAGAAGA
AACGACTCAAAAGCATGATGTTCAAACTGAGTTGAGATCTGATGTTGAGA
AGATATTGAGTCTAGCACCAAATGAAACCAAGTTTTCCAACTCAAGTTTG
ATATGCCCTAAGGACAAGCAAAACGTACCACTGGCAACAACACTACTTTT
CCAGTTTGTAAAAGCAGTTCGTGATGTTGACACACTGAAAACAATCAACC
TTCGAGTAGCTGATGTTTCTGAGGAACTTCATTTGCTGGGATTCATCATC
GAAGCTGTTTTGGCATGTTATGCTACTCCAGACACAACAATTAAAAGTCA
GCTTGAAAAGATTTCACTTGCTGCACATATCTTGTTAATCCTGAAAAGAG
AGTTAAAATCATTCCTCAACAACCAATTATACCAAGACCTGCAAGCAACA
TTTTCAGATGCCTTCTTTTGTGCTACCAAATGGAAATATCACCATCCTGA
CGTTCCCTTTTTTATCATGCTGTGTAGCAATGATACAATTGAACGTTTTT
TTGGAAACCTTCGACTGAAATACAAACAATCAGTTGTTGATAATTTGGAG
TTGATCTATGCAACCAGATCAATTCAATTATGCACTGACATGATGTACAA
GCACCCAAATTGGTTTGAAGAAAGCCAAAAGATCATGAAAAGGTTGTGTC
TTGATTATTGCAGCCCTGGAAAATGGGACCTTGAGAACTTAGTTCTTAAA
GATGTTCCAATTGTAGCTGTCTGGAATCAAGGAAGAGCGTTGGCAGAATA
CAAGTTTAATCAAATCCAGAAGTATCAAGGAGAAGTGTGTGATTTCAATA
TGATTGCTTCGTTGGGTTACACCCTTCTTTGTCCAAATGGAATTAAAATT
GGGTTGACAGACACAGACACTTCTGAAGATGACAACATACATGTTAATGT
TGGTGAGGGTAATACCATATTGGACGACACTGATATAGAAGATCGCCCTG
CAACATCACTCATTGACATGATACCAGAAGAAACGACTCAAAAGCATGAT
GTTCAAACTGAGATTGATGGCTCTCGAGTATACAAAGCAACGATCGTAAA
GAGCCTGTTCTCATCAAACCCTCTCTCAAAGGACAGACTCCGTAAAGTCA
GGGGGATGACTAAGTTTACTGAAGATGGCCAAGAAGCAAGTGAAGCAATT
GAGACATCAATAATGCCTGGGGATCCTATCCTTTTCAATGTCAAGGGTAC
CTTGAAGATTGTGAAGATATCTGTTTTGAAGAAGGCTACTCGCAAAGTGA
AAATGGTATCTTGTGGTGATATTAGTAATGAAAATGTGTATGTAAAAGGT
GCGGAGATGGGATTGGATAAAGATGCAGACTGTTACATCTGGAATGGGTC
ACTTGGTGAGGTGATTGAAACCACTGGACCATATTGCTATGCCATCCAAC
CTGATTTGAAAACAATTAAAGGAAAACTGATGTTTACTTTTGATAAGCAA
CTGATACTAGACTTGAATGTTGGTTTGACAATCCAAAACCCAAATCCAGA
TTGATGGCTCTCGAGTATACAAAGCAACGATCGTAAAGAGCCTGTTCTCA
TCAAACCCTCTCTCAAAGGACAGACTCCGTAAAGTCAGGGGGATGACTAA
GTTTACTGAAGATGGCCAAGAAGCAAGTGAAGCAATTGAGACATCAATAA
TGCCTGGGGATCCTATCCTTTTCAATGTCAAGGGTACCTTGAAGATTGTG
AAGATATCTGTTTTGAAGAAGGCTACTCGCAAAGTGAAAATGGTATCTTG
TGGTGATATTAGTAATGAAAATGTGTATGTAAAAGGTGCGGAGATGGGAT
TGGATAAAGATGCAGACTGTTACATCTGGAATGGGTCACTTGGTGAGGTG
ATTGAAACCACTGGACCATATTGCTATGCCATCCAACCTGATTTGAAAAC
AATTAAAGGAAAACTGATGTTTACTTTTGATAAGCAACTGATACTAGACT
TGAATGTTGGTTTGACAATCCAAAACCCAAATCCAGGTTCATCAAGCAGC
ACAAGTAGCCATTCAAACCAGAATTCAAGTAGTGCCACTGGTGCCAGTGA
AAATACCAACTCGTCAGTAAAGAAAGCCTCTTCAGAGAAAAAAGGTGCTC
TCAAACATGTCGTTGAATGCTGCTTATGTAAAGAAAGGATTCCGCTAAGC
AACATGAGAAAGCACATAGGCATCCACATTACCAAGAGCCACATCTCTGG
TTGCAACATATGTGGATTCTGTGGGAGAACTGTATGTAACACAAACCTGA
CAAATTCATCAAAAAGAGGAAACGGTTCATCAAGCAGCACAAGTAGCCAT
TCAAACCAGAATTCAAGTAGTGCCACTGGTGCCAGTGAAAATACCAACTC
GTCAGTAAAGAAAGCCTCTTCAGAGAAAAAAGGTGCTCTCAAACATGTCG
TTGAATGCTGCTTATGTAAAGAAAGGATTCCGCTAAGCAACATGAGAAAG
CACATAGGCATCCACATTACCAAGAGCCACATCTCTGGTTGCAACATATG
TGGATTCTGTGGGAGAACTGTATGTAACACAAACCTGACAAATTCATCAA
AAAGAGGAAACGAACAATACAATCAGATGACAACAAACTGTAAATATAAC
TCCTTCATCCAGAGGAAACCCGTTCATTCCCAACGAAACCCGTGCTCAAA
TCATGTTGTGCCCTGCCCTGTCTGCAAAGTGGCCATTTGGACTTATAATG
CACGTGCCCATTATGAAGGAGTACATCCAACCCATGGTTATAATGACTCG
GACTTTGTTTCACTTCAAGAACGGCAAAAAATGGCAAAAGCAGCAAAAAT
CAAAGCTACAAACACTTAAAACAATACAATCAGATGACAACAAACTGTAA
ATATAACTCCTTCATCCAGAGGAAACCCGTTCATTCCCAACGAAACCCGT
GCTCAAATCATGTTGTGCCCTGCCCTGTCTGCAAAGTGGCCATTTGGACT
TATAATGCACGTGCCCATTATGAAGGAGTACATCCAACCCATGGTTATAA
TGACTCGGACTTTGTTTCACTTCAAGAACGGCAAAAAATGGCAAAAGCAG
CAAAAATCAAAGCTACAAACACTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002_pilon | genome | sc0000002_pilon:2897979..2900598 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1759-2013:256 |
| Aaloc | 1471-1755:743 |
| Aaloc | 982-1467:1439 |
| Aaloc | 1-981:2621 |
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