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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000365_pilon:98786..101703+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044229 ID=XLOC_044229|Name=XLOC_044229|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2918bp|location=Sequence derived from alignment at sc0000365_pilon:98786..101703+ (Clytia hemisphaerica_ch_hm2_pilon)
CCATTTAAACCAAATACGCCAGAAAGAAGATGGGACAAAATGGTAGGGTT
AAAGTACAGATGAATTGTATCAGCATTGGACaatgaaatatgaaaataga
tgactaaaattgataaaaattgctataaGTATAAAAATATGTTGAATTAT
ATTGAAGTTCTTTGAAATTTTGTTTCGTTTAGCATTAAAATTTCGATTTT
TTTATATTATAGCTTATAAGCTTCTCAAAGCTAAAAAAACCTCAATCCAA
GCTAGGCTGAAAGGATTCTTCTATATTTCAGCTCAATCTAAGATGTGGTG
GTTTGCCTTGGTGTTGTTGATTCATGGGTCTCACGGAGATGCTCAGCATG
GTAAGATCTTCTTGTTTAAACaaattagctGTTGGATATTTGCATATTAG
CATAtcataaaattccaaattaAAGTATTCAGCCTTGTCACATTCTGTAC
AAGTACTACAATCCCGGTCAtaatatttaagaaaaaaagggaaattccca
cgaaatctcatagccacaaacgatttggaagcgctttAACTtacttagga
tctgaggatccaaaagttcaagaatggtccaaaaGGGCTgcgaatatagc
ctggaagtctataaaccccacTCAATTTgcaatattcgattaaatttaac
aatgaaatagcccaaaagcgactttctcgcccgaactttaatatgctaaa
aacgaggaattagccaaatttatcaatatattttgatattgtAGGTTTTT
ATTAATAATTGGGGAACATCCTACACTGTCGAATTAAACATCTACTCATA
ATACACCACATTTTACACCTCCTTCTCGGTGGAACCAATTCAGCCagtag
gggtaaaaataacggaccaaaactcgatggggattaataTTCTCATTTTC
TTATGgttggggatttgaattctattgtttttgagccagaaaatccagtg
gggatggaaaaagtagcacaatattttgcagtgacgatttaattatctga
ttattttcagcgaagGCAAGagttaaaatataattttctactgggtacga
tattttggccaatttttccaatgagTCTCATCGGgtatgtgagaaggggg
tatcaTTAAAATGTGTTCACACCACGTTAAATTCGTAGTCTGATTGTGTA
TGTAACGGTGGACGTTATGGCCCTATGACTAACCATATATCTATAACCAG
ATATCCAAGCCTTGTCTTTCATCTAACTACAGCTTCAAGGAGTGCCTAAA
GAATTTTCATATTCAAGGCCATTCTTCACAGTGGCTTTTTGATGCATTAA
ACTGTCTCGTTTCAATGTTTTGTAttcttatttttaaatttctttcgtga
tcctgaaaatagaaaagtaaGTTAAAATATACCGTAATCAAAATCTGGGA
AAGTTTGATTAGCTCTTGATCTATTGCTAGGGGCTCATCTAAAGAACATC
CCCACCCCTTTACGAATATaatttatttcacttttttaaaaCTCGATCAT
CAATCGGCTGAAATCTAAAAACTCGTAGCATCAAAAGCTTTACGTTTTTA
TTGTAATATTTACATAATCTATGTTTAGCTGCCAAGAAATCACTACACCG
AAGATTAAGTGATTATCCTGTACTCAAACGTTGGGAGATACCAATCAAAG
CTAACGTCGTTGGTCGAAGAAACAAAGACTTATGGGGAGACTCGAAAAAG
AAACGTTCATTTTGGGAGGCAAAGCCCCAGTTTACACTACATGAGCTTGA
AATGGAAAACGATCCAGAGAAGATATATATGGATTTACACTATTCAAGAA
ATATGCTTGAAGACGATTCTGACGCAGATAAAAGTATTGCACAATATAAG
AAAGATACATTGGAGTCGCCACCGTTGTTAAAGACTTCTGCGAAGAAGGC
AGAGGTTAAAAAGAAAGATGGTAAAAAGTTACTCCAACAAAAAGTAACAA
AACATAAGGAAGCAGACAAGAAAAGATTAATTGCATTAAAACCTTTCTTG
TCAGCCAAACACGTGACAACATCaacgaaaaagaagaagaaaaagagaag
cagaagaTCATTGGAGGATGAGGAGTTTGAAGAAATTAATACTGATGATG
GAGACTTTTCAATGGCGGGTTTCCAAGATGGTTTGATAGATGAAAGAGAA
GATCCAGAGAGAGTCAAACGTGATTCTGAATCAATCGCTAACTTCTATTT
TGACCAATACGATGATGATGGTGTTGATGGTAACGAAGCTGAAACTTACA
GTAAAAATAATGGTAATGATGTTGATGATGATACCCCTTCTCAAGATCGA
CAAAAAAGATCCATTGTTAACAAACCTAAAGATCATAAACTTGCCGTTGA
TAATTTGAAACGATCACGTACAGAAAATATTGCAAAACTGTTTCATAAAT
CAGTAGCAAAGACACATTCTGCCATCGATGCTTCAGCCAAACGATCAAGT
TTGTCTTCTAATATTGTTACTTCCAAGGCTGTTAGTAAAACTGACGGTGA
TTCTGCTGAGCAAAGAAAAGCTAAAGCTTTGATTCAAAAGGCATTTTTCA
GTTCAAAACATGGGCACTTGGTACCAAAAACCTCCGTTCGTCATATAATT
CCACAAAGCTCAACAACAATAAAGAAGATAGTCCCTAATGTTGATGTTAA
AGTTATATCAAAGAATCTTCTAGAACAAGATATTGGAGCTGTACCAGGTc
ttaaaaaagatgaaaattcagTAAGCAGGCAACATATAGCACATCCAGAA
AAATCAACGGATAGTATAAACACAGCAAATGTTGCACGTGCAGTTGCAGT
GGCAATGGAACAATTAAAAAGAGATAAAATGTGGGGCAAAGTATTTGTCC
ATGTTAGACCAAGTGGTGAACTTAAGGTTATGGTACAAGAAACTAAAAAG
ATGGAAGAAGAGACTTGA Coding sequence (CDS) from alignment at sc0000365_pilon:98786..101703+ >XLOC_044229 ID=XLOC_044229|Name=XLOC_044229|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2880bp|location=Sequence derived from alignment at sc0000365_pilon:98786..101703+ (Clytia hemisphaerica_ch_hm2_pilon)
CCATTTAAACCAAATACGCCAGAAAGAAGATGGGACAAAATGCCATTTAA
ACCAAATACGCCAGAAAGAAGATGGGACAAAATGATGTGGTGGTTTGCCT
TGGTGTTGTTGATTCATGGGTCTCACGGAGATGCTCAGCATGATGTGGTG
GTTTGCCTTGGTGTTGTTGATTCATGGGTCTCACGGAGATGCTCAGCATG
CTGCCAAGAAATCACTACACCGAAGATTAAGTGATTATCCTGTACTCAAA
CGTTGGGAGATACCAATCAAAGCTAACGTCGTTGGTCGAAGAAACAAAGA
CTTATGGGGAGACTCGAAAAAGAAACGTTCATTTTGGGAGGCAAAGCCCC
AGTTTACACTACATGAGCTTGAAATGGAAAACGATCCAGAGAAGATATAT
ATGGATTTACACTATTCAAGAAATATGCTTGAAGACGATTCTGACGCAGA
TAAAAGTATTGCACAATATAAGAAAGATACATTGGAGTCGCCACCGTTGT
TAAAGACTTCTGCGAAGAAGGCAGAGGTTAAAAAGAAAGATGGTAAAAAG
TTACTCCAACAAAAAGTAACAAAACATAAGGAAGCAGACAAGAAAAGATT
AATTGCATTAAAACCTTTCTTGTCAGCCAAACACGTGACAACATCaacga
aaaagaagaagaaaaagagaagcagaagaTCATTGGAGGATGAGGAGTTT
GAAGAAATTAATACTGATGATGGAGACTTTTCAATGGCGGGTTTCCAAGA
TGGTTTGATAGATGAAAGAGAAGATCCAGAGAGAGTCAAACGTGATTCTG
AATCAATCGCTAACTTCTATTTTGACCAATACGATGATGATGGTGTTGAT
GGTAACGAAGCTGAAACTTACAGTAAAAATAATGGTAATGATGTTGATGA
TGATACCCCTTCTCAAGATCGACAAAAAAGATCCATTGTTAACAAACCTA
AAGATCATAAACTTGCCGTTGATAATTTGAAACGATCACGTACAGAAAAT
ATTGCAAAACTGTTTCATAAATCAGTAGCAAAGACACATTCTGCCATCGA
TGCTTCAGCCAAACGATCAAGTTTGTCTTCTAATATTGTTACTTCCAAGG
CTGTTAGTAAAACTGACGGTGATTCTGCTGAGCAAAGAAAAGCTAAAGCT
TTGATTCAAAAGGCATTTTTCAGTTCAAAACATGGGCACTTGGTACCAAA
AACCTCCGTTCGTCATATAATTCCACAAAGCTCAACAACAATAAAGAAGA
TAGTCCCTAATGTTGATGTTAAAGTTATATCAAAGAATCTTCTAGAACAA
GATATTGGAGCTGTACCAGGTcttaaaaaagatgaaaattcagTAAGCAG
GCAACATATAGCACATCCAGAAAAATCAACGGATAGTATAAACACAGCAA
ATGTTGCACGTGCAGTTGCAGTGGCAATGGAACAATTAAAAAGAGATAAA
ATGTGGGGCAAAGTATTTGTCCATGTTAGACCAAGTGGTGAACTTAAGGT
TATGGTACAAGAAACTAAAAAGATGGAAGAAGAGACTTGACTGCCAAGAA
ATCACTACACCGAAGATTAAGTGATTATCCTGTACTCAAACGTTGGGAGA
TACCAATCAAAGCTAACGTCGTTGGTCGAAGAAACAAAGACTTATGGGGA
GACTCGAAAAAGAAACGTTCATTTTGGGAGGCAAAGCCCCAGTTTACACT
ACATGAGCTTGAAATGGAAAACGATCCAGAGAAGATATATATGGATTTAC
ACTATTCAAGAAATATGCTTGAAGACGATTCTGACGCAGATAAAAGTATT
GCACAATATAAGAAAGATACATTGGAGTCGCCACCGTTGTTAAAGACTTC
TGCGAAGAAGGCAGAGGTTAAAAAGAAAGATGGTAAAAAGTTACTCCAAC
AAAAAGTAACAAAACATAAGGAAGCAGACAAGAAAAGATTAATTGCATTA
AAACCTTTCTTGTCAGCCAAACACGTGACAACATCaacgaaaaagaagaa
gaaaaagagaagcagaagaTCATTGGAGGATGAGGAGTTTGAAGAAATTA
ATACTGATGATGGAGACTTTTCAATGGCGGGTTTCCAAGATGGTTTGATA
GATGAAAGAGAAGATCCAGAGAGAGTCAAACGTGATTCTGAATCAATCGC
TAACTTCTATTTTGACCAATACGATGATGATGGTGTTGATGGTAACGAAG
CTGAAACTTACAGTAAAAATAATGGTAATGATGTTGATGATGATACCCCT
TCTCAAGATCGACAAAAAAGATCCATTGTTAACAAACCTAAAGATCATAA
ACTTGCCGTTGATAATTTGAAACGATCACGTACAGAAAATATTGCAAAAC
TGTTTCATAAATCAGTAGCAAAGACACATTCTGCCATCGATGCTTCAGCC
AAACGATCAAGTTTGTCTTCTAATATTGTTACTTCCAAGGCTGTTAGTAA
AACTGACGGTGATTCTGCTGAGCAAAGAAAAGCTAAAGCTTTGATTCAAA
AGGCATTTTTCAGTTCAAAACATGGGCACTTGGTACCAAAAACCTCCGTT
CGTCATATAATTCCACAAAGCTCAACAACAATAAAGAAGATAGTCCCTAA
TGTTGATGTTAAAGTTATATCAAAGAATCTTCTAGAACAAGATATTGGAG
CTGTACCAGGTcttaaaaaagatgaaaattcagTAAGCAGGCAACATATA
GCACATCCAGAAAAATCAACGGATAGTATAAACACAGCAAATGTTGCACG
TGCAGTTGCAGTGGCAATGGAACAATTAAAAAGAGATAAAATGTGGGGCA
AAGTATTTGTCCATGTTAGACCAAGTGGTGAACTTAAGGTTATGGTACAA
GAAACTAAAAAGATGGAAGAAGAGACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000365_pilon | genome | sc0000365_pilon:98786..101703 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 103-1440:1581 |
| Aaloc | 43-99:293 |
| Aaloc | 1-42:1 |
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