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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000365_pilon:62243..67411- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044224 ID=XLOC_044224|Name=XLOC_044224|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5169bp|location=Sequence derived from alignment at sc0000365_pilon:62243..67411- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACAGTATGCTGTCAAAAAGATTGAAAATTGCTGGTGTTGCTATCG
GGACCGTCAAATGTTTCGACTTTTGAAGCAAGCTATATCAACTGCGGTGA
GTTACCTTTCCTCCTTACTGAACAATAAGAACTTCAGATATTCAATGAAC
TTACTTACTCTGTACAGCCCAATGACCTTTGTACTGTAAATCAGTCCTAT
ATCTGCCATCTTTGATCATAGTTTTTCTGAAAGTGGTACTCGCAAAGAAA
CCTTTTCAGTGTTGGAAATTATCGTTGAACGGTGCTACATCATTTTATCA
TGTTATTGAATTGGAAATTAATATGCTGTAGTTTTCACAATGAAAATTAT
CAAAATGATTACTTCAATTTCTTTTGAAATGTTGTCCAGTTGTATTTTTT
ATTGAAGAAATGATTTTTTTCTTTCAGGATCATTCTTTCACTGCAGAAGT
GATGCGGAAAATCAGTCCAAATGAAGCAGAATTGTTGAAAGACCCAGTAT
TTAAGACCAAGATTCGATTCAGGTAGCAAATCCATTTTCTATATACTACA
GAGATGCAGCAAAACTATTATAAATACAAAGTGTTTAAAGAAAATTTTAA
GCCAGATAAAATATCGCAAAATTAATAACTGATGTTAAATTGTGAGAGTG
TTTCAAGGGGGGATCTTCCATGCAATGTGTTCTATGTGTATACTTTATGC
AAATACTTAGTAGTATTATTATTTGTATTTGAGTTTTTGGCTGCCCATTA
ATCCCTAAATTTTCGTCCATTATTACAAAACCTAGTTGCAATTTCAGGTT
TTCTGGTGAAGAATTTCCACCTCGGATTGTGTTCAAAGTATTCATAAAGA
CTGATGGATTTGGAGTCAAATATCTATGCGGAAAGAAGGTCATAAAGCCT
GCTTCTCAGGTAAAGTATCTCCTGATCATTCTTTTCTCTATTTGGATCAG
ACTTTTTGAATATCTTACCTTTCTCAGACTGTGTAGGAAGGTAGAAAGTT
TGGCTACTGTGCACAAGGTCAAAGATTCAATCCCCTGCCGGTTCATACCA
AAGACTTCGAAATTACTGTAGTAAATGTTCCTTGATGCCTCTCTACTTGG
TGGTCAGCAATTAAAGAGAAGTGTAGGGTAATTACTAGCCTGGATATCCA
AGCTCAAAATTTTAGAAAAAAACAAAATTTACCTCAACATACATACAAAG
TTCTAAAATTATAGAGCTTGGTCTCCCTAGAGAATGAAAGTGAAAACCCA
TGTTTCCTAGCCAACCCAGGGCAGCAAAACAGAAATTAATAAAAAGCAGT
CTTACAAGATCTAAAACTATTTAAAACATCCAAAGATTACACCAAAGTCC
ATAAAAAAGTTTGCATGCATAATCATGACCAACCATGTTTTCTTGGAAAA
TGAACTTGCCTCTGTTTTCTTCTTTTTCATGTTTTCATGTAACAGAAAGC
CCTATCTTCACTAGCAACTGGAGGACGGCAACTGGAGGACTATCCTATTT
ATGCTTTAGAATTGCTCAACGCCGTGTAGATTGGCCCTTACGGTTTTAGC
GAAGTGAGCGCAAGCAAGCGGACTACATTCTCTTAAAGAGAATGCAAATC
GCTCTAGGGAGACCAGGCTGTAAACCAGAACATAAAATATCAAAAACTAG
ACTGTGAAATAGTTTACCAGGCTAGGTAATTACAGCAATCCAGGGAGAGA
GACTTAGTTACTTTGATAGAATCTAATGGACTTTGCTAGAGACAAAACAA
AAAAATTCATATATTATCATTATGGAAGCTACGGATAATGAAAAAAGTGG
GTCCCCTTGCTTCCATGAGTCAATAGTAATCTTACCCAAAAAAAAGGAGA
TGTATTGAATTGACATTGTCAAAAGCAAATGAAAAGTTTTAAAAAATCTT
TTGAGAACCTGGCACAGAGTCCTGGATTTGCAGGTAAATGGAGCAAGAAA
AACTGTTGACATTAGCCCTCGGAGTCGAGGAATCCTAGCCATACTGGAAA
GAAACATAAAAATAAAGTTTTTCTACTTTTCTTTTAGGCAGCGTCAGATT
CGTGTAGCATGATGGGTAATCGAAAGTTTCTTGATCAAATTCTTAAAGAT
TTGTGTTTGGAAGAACAAAAAGGTGTTCAAAATGAAACAGAACTGTCCAG
TATGAAAGATTACATGAAGGTTAGTGGTTTATTTATCGGTCATTTTACTT
CAGGTAAAATAAAATAAAAACAAATCAGGAAAACGGCATCTTGTTCTTTG
ATACTCAAAGAAAAGCAAAAAGTTTGGTTTTTAAAAAAGCTATTTCTCAT
ACTAAACTTAACACAAAGTCTTTTTTCGGACTTCCTTTCGTTTTATTTTA
TCATCGGTCAATAGAAAAAAAGATGCTGCTCTGGGCAACACTTGGTAAAC
TAGTGAAAACCACCAAGTTTGGTTGTTTGCTTTAAATCAATAGGCTCAAC
TTTAGCAAATTTACTTTTACATTTTTTTTCCGCTAGAAAACCTTTCTGCC
AATCCAGTCAGGTCTGTGCATCTTCTAATTAGACAATTAAAACAAACATT
TTAATCCTTTGAATTTCCAAAAAGAAAGGCCCCTGTATTCTTTAAAGGTG
AAATATTTCTGAACCGTCTCATGGTATCAGCCCCCCCCCCCAGAAATCTG
AAGGGCACCTAGGCCAGGTTAGTAAAGGGGGGCTAATGCCTTGCAATTCT
TTGGGGTTACCTATTCATTACGGGTACCTAGCTGTCTTGATGGAGGTTCT
GGAGGCTGGTTATATTTTCCAAATCGAATTTTTCAAAATATTTCAAATTA
TTGAATTTTTTTATCCCAGCACCTAGTTTCCCATCCAATTTTTCTTTCGT
TTCCCATCACGCCATCTTTTGCTATATTTTTCTAATGTGATTGTTTTGAT
TTACAGCCGCCATCTTTATAGCATAACAACAGAGCTTATTAGCAGGCGTT
CATGCGTGAGCATGATTTTAGGAATGACAAAAGAACAAAAAGTGTCAATT
CAAATAAATTATCTGCTGAATAGGGGTACCTAACTCAAAGCAATTTTTCA
AGGGGACCTAACTCGTTGGGGGCACCATGCTTTTCAGGGGCACCTGAAAA
GTGGGCTGAAACCATGCGTCTTTGAGAAGCAAGAGGCCAAGTGTTAAGTT
CAAAGCCCAAAAGGCTAAAATAAGCCAATAAGATTTGCGCTGCTTTTAGA
ATTATTGATTGAATGTAGCACTTTTTTTGTTTTCTCGCGGAAAATATTCA
AATTCTGGCAATGGATTACTTTCAATCTGGCATTTGTGTTAAAACCACGC
CTTTAAGATGAGAAATAAGTGGCTTCATTTCCCATCTAAGAGTTCCAACT
TTCGGGGCTTTAAACTCAATAGTGCGAAGGTTCTACACAGAATAAATCTC
TGTCTTGATATAAATCATATCTTCTATCATTATCTTTTATTGTATAGTAC
ATTTCAACACTGGACGAAACGATGGCAGACAGTGGTGGAAGAGCAAACAC
TTGGAGAACATTGACTCTTGATGGTATGGGTTCAACATTTTTTTATTTCA
TCTATCATCGATTTATGTTTTCACACTTAATTCCCTATAGCACATTATAT
ATTATACTATATTTTGGAAGCCTTTTATAAATTTCACCTCGTAAATTGAG
CAATGTAAACTTTCCACTAAGAAATTCAAAAAAGGTTTAAAAAGGAAGTC
TTTAAAGAATTTTTTATTCATTATTATTTTAGCAGGTAGGGAATTTAGAG
AATGTAAGAATAGGTCATTTGATGACTATGTTCGGACGTAACGATTCCAT
TTCGCTCCGAAACGAATTGAAGCCATTCTATTGGTTACATTCAAGTTTTA
CGTCACTTCTAACCAATAGAATGGCTTCATTTCGTTTCGGAGCGAAACGT
AAATGTTACATGCGAACATGGTGGCAATCAGTTTTAACATGACTTAAAAG
TTGTGTTTTGGTTTTTCTATTTCAGTAATACCAAGACACCACATCATATC
CGACGTATTAGTGTATCTACAACACGGAACTAAATCAGAAAATTTGACTG
AATTTTGGAGGGAACACCTGAGAACAACTTCTCCTTGTGTACCGCTGACA
CAAACACAACAAGTGGAATATATAAAGCTGCTAGAAAACAGGTAAGAATT
TTATTATGAATTGGATCAAATTTTCAGCGCTTAATTATTATCTATTAGAA
ACTATTGGTCACTGCAATCTTAAATACAAATTCTGCAAAAATCCTATGCA
GAACTTGCAGCGTTTGAAGGAGATTCAAGCACAATATTCTTTGAACTACT
TTATTTGGAGATGTCACAGAAGTCACAGCTTGATTTCCTCTCAACAAAAA
AAATGTCCACATCTTTAGAATTTCAACCCATACATTCTTTTTTCGTTTGG
TTCCGTTCCAGTTTTCAAAATCTAGATCGGTGGATTTCGAAAAGAGAGAA
CAACATGGAATTTATTTCAAACAGATTGCTTTTAATAAGATTCCTTCCAA
ATATTGAAAGATCAAAATAAATAATTAGAAAAACTAATGAAGAGGCTAAC
TACGTATAGTTTTCTTTATGTTGATATTTTGTCACTGCTTTAGAAGAAAT
CAAGAGCCCGGAAGGCGAAGTAAGAAAGCGAGAGAAAGAGTTGCCAAGAT
GAAGAAGATGTATCAACAAAATGATACTGAATTGGTAAATTTAGGTTTCT
TTTCTTCAAAAATGAAAGCTACCGTAGTATGTTTAATTGTTTTGGGTTTT
CTGAGATAATATTATTACTTATTTCAGTCATCGTCCGAGTTGATTTACCA
TGACTTTGGAAATCGTTTATAATAATACATACTTCTTCTCTGAATTCATT
CCCATTTATCATGTGTAGCTAGACTTGTATATAGTTCCCGGCAAATAGTT
TTGTTTTGATTTTATGCTGGGACATTATTTACTTGTTCTACATTTTATAA
CACAATTCCTTTCAGCAGTCTCCGCCCACATTGCCGCCATTTTCGCCGCC
CGCTAATCACCACGATGACCATTTTAACAATACAAACGATGACGTCATCG
TTCCATCAGCATTCATACGAAATGAGGAAATCGATTTTGAAAATGAGCTT
TGGGAAGAGGAAGGGAACATGCTGTTTGAATGGACGAAAAATTTATCACT
TACGAATCTTGCTTCTTGA Coding sequence (CDS) from alignment at sc0000365_pilon:62243..67411- >XLOC_044224 ID=XLOC_044224|Name=XLOC_044224|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1938bp|location=Sequence derived from alignment at sc0000365_pilon:62243..67411- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACAGTATGCTGTCAAAAAGATTGAAAATTGCTGGTGTTGCTATCG
GGACCGTCAAATGTTTCGACTTTTGAAGCAAGCTATATCAACTGCGATGG
AACAGTATGCTGTCAAAAAGATTGAAAATTGCTGGTGTTGCTATCGGGAC
CGTCAAATGTTTCGACTTTTGAAGCAAGCTATATCAACTGCGGATCATTC
TTTCACTGCAGAAGTGATGCGGAAAATCAGTCCAAATGAAGCAGAATTGT
TGAAAGACCCAGTATTTAAGACCAAGATTCGATTCAGGATCATTCTTTCA
CTGCAGAAGTGATGCGGAAAATCAGTCCAAATGAAGCAGAATTGTTGAAA
GACCCAGTATTTAAGACCAAGATTCGATTCAGGTTTTCTGGTGAAGAATT
TCCACCTCGGATTGTGTTCAAAGTATTCATAAAGACTGATGGATTTGGAG
TCAAATATCTATGCGGAAAGAAGGTCATAAAGCCTGCTTCTCAGGTTTTC
TGGTGAAGAATTTCCACCTCGGATTGTGTTCAAAGTATTCATAAAGACTG
ATGGATTTGGAGTCAAATATCTATGCGGAAAGAAGGTCATAAAGCCTGCT
TCTCAGGCAGCGTCAGATTCGTGTAGCATGATGGGTAATCGAAAGTTTCT
TGATCAAATTCTTAAAGATTTGTGTTTGGAAGAACAAAAAGGTGTTCAAA
ATGAAACAGAACTGTCCAGTATGAAAGATTACATGAAGGCAGCGTCAGAT
TCGTGTAGCATGATGGGTAATCGAAAGTTTCTTGATCAAATTCTTAAAGA
TTTGTGTTTGGAAGAACAAAAAGGTGTTCAAAATGAAACAGAACTGTCCA
GTATGAAAGATTACATGAAGTACATTTCAACACTGGACGAAACGATGGCA
GACAGTGGTGGAAGAGCAAACACTTGGAGAACATTGACTCTTGATGTACA
TTTCAACACTGGACGAAACGATGGCAGACAGTGGTGGAAGAGCAAACACT
TGGAGAACATTGACTCTTGATGTAATACCAAGACACCACATCATATCCGA
CGTATTAGTGTATCTACAACACGGAACTAAATCAGAAAATTTGACTGAAT
TTTGGAGGGAACACCTGAGAACAACTTCTCCTTGTGTACCGCTGACACAA
ACACAACAAGTGGAATATATAAAGCTGCTAGAAAACAGTAATACCAAGAC
ACCACATCATATCCGACGTATTAGTGTATCTACAACACGGAACTAAATCA
GAAAATTTGACTGAATTTTGGAGGGAACACCTGAGAACAACTTCTCCTTG
TGTACCGCTGACACAAACACAACAAGTGGAATATATAAAGCTGCTAGAAA
ACAGAAGAAATCAAGAGCCCGGAAGGCGAAGTAAGAAAGCGAGAGAAAGA
GTTGCCAAGATGAAGAAGATGTATCAACAAAATGATACTGAATTGAAGAA
ATCAAGAGCCCGGAAGGCGAAGTAAGAAAGCGAGAGAAAGAGTTGCCAAG
ATGAAGAAGATGTATCAACAAAATGATACTGAATTGTCTCCGCCCACATT
GCCGCCATTTTCGCCGCCCGCTAATCACCACGATGACCATTTTAACAATA
CAAACGATGACGTCATCGTTCCATCAGCATTCATACGAAATGAGGAAATC
GATTTTGAAAATGAGCTTTGGGAAGAGGAAGGGAACATGCTGTTTGAATG
GACGAAAAATTTATCACTTACGAATCTTGCTTCTTGATCTCCGCCCACAT
TGCCGCCATTTTCGCCGCCCGCTAATCACCACGATGACCATTTTAACAAT
ACAAACGATGACGTCATCGTTCCATCAGCATTCATACGAAATGAGGAAAT
CGATTTTGAAAATGAGCTTTGGGAAGAGGAAGGGAACATGCTGTTTGAAT
GGACGAAAAATTTATCACTTACGAATCTTGCTTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000365_pilon | genome | sc0000365_pilon:62243..67411 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 769-969:202 |
| Aaloc | 679-768:576 |
| Aaloc | 514-675:1193 |
| Aaloc | 436-510:1723 |
| Aaloc | 304-435:3133 |
| Aaloc | 193-303:4372 |
| Aaloc | 97-189:4743 |
| Aaloc | 1-96:5170 |
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