XLOC_044197 (mRNA) -

Overview
NameXLOC_044197
Unique NameXLOC_044197
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000089_pilon:262901..263965+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044197 ID=XLOC_044197|Name=XLOC_044197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1065bp|location=Sequence derived from alignment at sc0000089_pilon:262901..263965+ (Clytia hemisphaerica_ch_hm2_pilon)
GCAGATAATATTTTCAATAGCTCGTTTCTTGATCAATCATATTCAGATCC TCACCCGACTCaaccgaaatttttttccacGAAAGTTGTACATTGTATTT TTCGGGACAGTTCTGTTTCGTTTCAGAATAGTAAACtgtatcaagtatca aaaacACATTTTGAACACTCTAAGGTTGCCATTGGTACTTATCAAGACAC AATCATTAACATAGAAAGCTGTTCATTCAAGGGATCGGCGTTCGATACAC CACCTCCAAGCCAGCTGGAACTATATTCAATAAGGTCAAATAACGAAGGG AAGGCATCGATAAATAATTGCACTTTTGAAAACTCGAACTCCGGTTCCAT TATCTGCAACGGGTTTAGTATCACCATCACAAATACAACATTTTTGAACA ATTCGCTAATCGACGATCAAGACTTCGCGACCACCATGGCAGCTGCATTA ACTATAACGTCATCCATGAGTGTTGACCTTAGTAATTGTACCTTCTCAGA AAACAGAGCTCCCGCAATTCTCTTCAGCTCAATATACATCGTAATGTCAA ACAGCATCGATATCTTTTTACGCTTATCTGAGGTGATGGTGGTGTCGTCT AGTGACCTCAATAGGGAAAGTAACATTTTACTTATCAAAGCAAATAGACA GGCCGTATTAGAAGATATAGGTATCTTAAACTCGAGCGTATCGTGTTTAC CAAACTATAACATACATGGCATTATGAGGAAATATATAGGGAACAACCGA TTTTTCGTACGGTTGTCATGCGAAGAATGCGAGGGGACGAAATACAATGT CAAAAACAAATCACACGTCTCTTGGGATACTTCTGGTGATGCTACAATTC ACAATGTGACATGCTATCCTTGCCCTTACCAAGCTTCATGCGTAAATGGT ATTAAAAGTAAAGGTAATTATTGGGGATATGCTGATCATTTAGGATATGT GGCTTTCGTGCAATGCCCTCCTTTCTATTGCTGTCCTACTTTAAAGAAAT GTGCTTCTTATAACAGCTGTTCGAACAATCGACAAGGAAGACTTTGTGGT GAATGTAAatacaat

Coding sequence (CDS) from alignment at sc0000089_pilon:262901..263965+

>XLOC_044197 ID=XLOC_044197|Name=XLOC_044197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2130bp|location=Sequence derived from alignment at sc0000089_pilon:262901..263965+ (Clytia hemisphaerica_ch_hm2_pilon)
GCAGATAATATTTTCAATAGCTCGTTTCTTGATCAATCATATTCAGATCC
TCACCCGACTCaaccgaaatttttttccacGAAAGTTGTACATTGTATTT
TTCGGGACAGTTCTGTTTCGTTTCAGAATAGTAAACtgtatcaagtatca
aaaacACATTTTGAACACTCTAAGGTTGCCATTGGTACTTATCAAGACAC
AATCATTAACATAGAAAGCTGTTCATTCAAGGGATCGGCGTTCGATACAC
CACCTCCAAGCCAGCTGGAACTATATTCAATAAGGTCAAATAACGAAGGG
AAGGCATCGATAAATAATTGCACTTTTGAAAACTCGAACTCCGGTTCCAT
TATCTGCAACGGGTTTAGTATCACCATCACAAATACAACATTTTTGAACA
ATTCGCTAATCGACGATCAAGACTTCGCGACCACCATGGCAGCTGCATTA
ACTATAACGTCATCCATGAGTGTTGACCTTAGTAATTGTACCTTCTCAGA
AAACAGAGCTCCCGCAATTCTCTTCAGCTCAATATACATCGTAATGTCAA
ACAGCATCGATATCTTTTTACGCTTATCTGAGGTGATGGTGGTGTCGTCT
AGTGACCTCAATAGGGAAAGTAACATTTTACTTATCAAAGCAAATAGACA
GGCCGTATTAGAAGATATAGGTATCTTAAACTCGAGCGTATCGTGTTTAC
CAAACTATAACATACATGGCATTATGAGGAAATATATAGGGAACAACCGA
TTTTTCGTACGGTTGTCATGCGAAGAATGCGAGGGGACGAAATACAATGT
CAAAAACAAATCACACGTCTCTTGGGATACTTCTGGTGATGCTACAATTC
ACAATGTGACATGCTATCCTTGCCCTTACCAAGCTTCATGCGTAAATGGT
ATTAAAAGTAAAGGTAATTATTGGGGATATGCTGATCATTTAGGATATGT
GGCTTTCGTGCAATGCCCTCCTTTCTATTGCTGTCCTACTTTAAAGAAAT
GTGCTTCTTATAACAGCTGTTCGAACAATCGACAAGGAAGACTTTGTGGT
GAATGTAAatacaatGCAGATAATATTTTCAATAGCTCGTTTCTTGATCA
ATCATATTCAGATCCTCACCCGACTCaaccgaaatttttttccacGAAAG
TTGTACATTGTATTTTTCGGGACAGTTCTGTTTCGTTTCAGAATAGTAAA
CtgtatcaagtatcaaaaacACATTTTGAACACTCTAAGGTTGCCATTGG
TACTTATCAAGACACAATCATTAACATAGAAAGCTGTTCATTCAAGGGAT
CGGCGTTCGATACACCACCTCCAAGCCAGCTGGAACTATATTCAATAAGG
TCAAATAACGAAGGGAAGGCATCGATAAATAATTGCACTTTTGAAAACTC
GAACTCCGGTTCCATTATCTGCAACGGGTTTAGTATCACCATCACAAATA
CAACATTTTTGAACAATTCGCTAATCGACGATCAAGACTTCGCGACCACC
ATGGCAGCTGCATTAACTATAACGTCATCCATGAGTGTTGACCTTAGTAA
TTGTACCTTCTCAGAAAACAGAGCTCCCGCAATTCTCTTCAGCTCAATAT
ACATCGTAATGTCAAACAGCATCGATATCTTTTTACGCTTATCTGAGGTG
ATGGTGGTGTCGTCTAGTGACCTCAATAGGGAAAGTAACATTTTACTTAT
CAAAGCAAATAGACAGGCCGTATTAGAAGATATAGGTATCTTAAACTCGA
GCGTATCGTGTTTACCAAACTATAACATACATGGCATTATGAGGAAATAT
ATAGGGAACAACCGATTTTTCGTACGGTTGTCATGCGAAGAATGCGAGGG
GACGAAATACAATGTCAAAAACAAATCACACGTCTCTTGGGATACTTCTG
GTGATGCTACAATTCACAATGTGACATGCTATCCTTGCCCTTACCAAGCT
TCATGCGTAAATGGTATTAAAAGTAAAGGTAATTATTGGGGATATGCTGA
TCATTTAGGATATGTGGCTTTCGTGCAATGCCCTCCTTTCTATTGCTGTC
CTACTTTAAAGAAATGTGCTTCTTATAACAGCTGTTCGAACAATCGACAA
GGAAGACTTTGTGGTGAATGTAAatacaat
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044197XLOC_044197-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089_pilongenomesc0000089_pilon:262901..263965 +
Properties
Property NameValue
Aaloc1-1065:1