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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:91593..98585+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044150 ID=XLOC_044150|Name=XLOC_044150|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6993bp|location=Sequence derived from alignment at sc0000089_pilon:91593..98585+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGAGTGGAATGGGCTTGAACGATCACCATGAGGAAGAAGTtaagaaatt
cttgaaatttgctCGTTACAACCGCCAACAACAACTACGCTCTGTTGAAG
GAAGCTTCCAAGATCTTAAAGACAGCCGGTATTTTTCTTACCTGTTCTCA
CAACATTATACAGTATTCCAATGGAAGATATCACACATAGTAATATTTGC
AATTTTTAATCACATCACCAGCAGCTTTATctaatttgacttttaatacA
TTCAGAGcaacaacaaaatatttctaagaATCTTGAAATACCCAGTGAGC
CTCTAGGGGATTTATTGGGaaagaataattttcaaatattagtTTCTTTA
GGGaatattaaattaaataattttatcgtgaattaaaaaatttattaaaa
aaatgaataattttatctaatCAGTCATGATCATTTTTAATAAACTTCAA
GAGGGCCAATGGCACCTTGGATTTcctcatttttaaaacattaaaagtAT
CTTGATTAAAGCAAGTATATCTATTCATGAGTCTGTTTGCTTAATTTTGC
AAAAACACTCcacagctccattaaaaacgcAGACAATTTATTCCAATTCT
TATTCGACACTTTGCAGTCAAAAATTGTAAACTCTCTGGTCAAGTGAACC
CATTGCAGTGTTGAATCGAACAATTAAGTTACGTCACAcgctatcttttg
ttttgatgattggttgaataaCTGCAATCTTTTTTCAAGCTCAATTTGAT
TACTATGATAACGATTCAACGAATGTTGTATTTCTTTATTAGACTTCAAG
AGGACACGTTCACAAGTGATGAAGTTCAAGAGATGATTGACGGCTTGATG
GTGGTTGTCAAAGGAGCTGTAGAAACAGAACTGTTGAACGCTGCTCACAC
CAATGTCCTTCTGCTCTTCCAGTTATTCAGCCAAGCTGAAAGATGGCATC
TCAAATTGCAAGCTGATATCTCCGAACTGGAAAACCAGTACGGATTTGTT
GTTTTTAACATACTATTTTTACGATGGGGGGTTTTCAGAGATTTTCCACT
GTTACAATATCAATAAAAAGGGCTATATTTTAAAGgtaagttttgtattt
gaataaAGAATTCACTTTAACAAAACTCTTTGATAAGGGGGAATTTGCAA
TTTTCTATGATCAACAGACTGTCTTCTCAGGCAATTTTCTCATGACCTGA
AGTTCAGGAACTATTTACACCACCCTTTTTTATTTCACCTCATTTCAGGA
AGCTTTTGAAGGATATTGCTGATTTTGAGGAGCAAGAAGCATCTGGTcga
agaaacaaaaatcttgTAAGCTGGGGAATTTTTGATGGATGATATTTTTG
TCTGTCTTCTATTTTAAAGACAAAATCTTGAATCCATCTTTAGGAGAAAA
TGTATTGATAATTGAGAGAAAGTTACAAAAAGAGGCGAAAATCGTGAGAA
CCGTGAACGTGCCTAAATAACTTTGTATATAAGTGATCGACAACAAGTAA
TCCTCTAGTAATGAACCCGCAGATGTATTTTAACAAAGGTATTTCCTcac
tttcttaaaaataatagctatttttatgttttgtagGATTTGTCAAATTT
GGCGAAAAGCAAATTGGAGCCTTTGAATGAAGGTGGATCTGCCGCCTTAT
TGCAAATGGtaatttttttctgcttttgttTGACTCAGCTTGACCTCCTT
TAAAGATTTTCCAtgcatatttttttttacagtgaACCAATGAAAGTGTG
GGATATTTGTTTATTACATTAGCCATTGtttatgtattacaatgaaaAGT
GAAAACAGTGAATACTttcatgttgtcttctgaccagccaccagaaaaac
caacggatccggcgagactcgaactcacaaccatgccattcgcgggcatt
tgctctaccattgagtTCGTAGCGGACCCGTAGCTCTATGGTTGAGCAAA
TGCCCAAGAATGATAAATAATTAATATCTGTGGTCGCATGCCCAAACCTT
TCCGTTAGTGTAGTAGTTGGTGGATTCCAACACGTTAACAATGTGGAGAT
GGATTTCTCTCAATTCACCGTCTCTGtccagtcagtagacaagaattcac
ttccacATTTTTTAAGGAAGCTTCTTGGATTGATAgccattgaatatttt
ttaatgatttctttATTGGTTAGGTTGCCAACTTGTTTTAAGCTAATATA
CCTTTGCTAAAGATTTTCCGTGACCCAATAACATGAGGTTCCTTGTTCAA
GGTTTTCctcgattttcaaaattctatctATATTCATTTTTATCCCTTTC
TAATAAAATTTCGGAGAAGGGTTCTATCGAGAATAGAAGATGAAGATATT
AAAAAGAGGGGCAAGGGATTGGATCTAGCGATTCTCGTCAATAATTGATT
GGTGGTTGcaaataaaatgattttctttctctcatTCTTCTCCATGTTTG
ATATAAAAAGCACCACCCACCTAATGAGAGTGGAtttctatgaaaaatat
ttctccaaaagttcatcaaaatcTTTGGAAAGTTTATTCCTTCAttttac
tgttgtttttctttttcgttacttagttttattcgtgaagactttttggg
tgaaaaattcTTCATCGAAATTCTCTTTAATGGTATTCCACGAAGACTTC
TTTTCACAGAAAATCACCTTCTTAAACTTCTTAGTTTTTCAAGAAGCACG
TTGTCAGTGATTGTTGCTATGTTTATAAGTCGTGTTGCCTTGACAACGCc
atgctgagtcatcaaaatgTCTTCTTCTGTAACTGTGTTGACGATGAAAA
CACAAAACTGAATCATAGTAACCTACTAtgaattttcaaactatttttca
gtTCTGAAATGGAGAGTTTTATATGTTAGTTCTTACTGCTTTTTTACTGT
GATTGGGTGTATCATAATTGATTTTTATATTGATTAGGTCTACCTAATTA
GTATGACCTGGTCTACCTAATTAGTATGACCTAATTTGGTGtttacttaa
aaaaaatgtttcataaaatatttaGACGAATAAGATTTAAACATTTGAAC
TGAAAGCAATAAAGGAAATTGGGCACTGTGGAAAATGCGAAGTTGACATT
TTGGCCTGTGTTTCTCTTTCTTCATTGTTTATGTTTGTTTTGGAATATGG
TTGCAGGAAGGCTAGAATATGTTATGGAATTTTGTTCAGCATCTGAAAGA
CAGGTTTTGACAGATTTCATTCAAGTTCAAATGAAGGTACATGGATATAC
CCCCATATTGAGTGttcttttttcctttgaaaagaTGAACTAGCAATGGA
ATTGAAAAGACAATGCAACACCCCTTTtccacagacccggtaggattttt
cagccaatggggataaaaataacggactgaaactcgatggagagTGATAT
TCCCATATATTTTATGGCTGGCTATTTtaaaattcctttgttttcaagtc
agaaattcAGCGGGAATGGGaaaaaaaGTAGatattttgtagtgaggatt
gatttatttgattattttacagtggacaaaaatttttcaccgcgacgata
ttttggccaatttttccagtgggaaggggtcctaGTGGGTCTGTTACAAG
GCGGTGTAATGCAGAAATTTGCCTCGTAAAAATTCTTCCTTTCGAGGTTT
TCATTGCAGACTAGAGAATGctctaaagtaaaaaaattttaaaaatccac
tttcaaaaaaaatgtaattgcTGTCATTTCACCAATTCTGACTTTTCATC
GAGGTCATCACTTTCaaattgtttcttttctttagtgGGGCTAACCCAAT
GAGTTCGGTAAATAGGTGGAATGGGAAGAGGTGTTTTCTGTTATCTGTGG
TTAcatcgattttgaaaacgaagatttcgatagaaattccCCACCTTTTT
CaagtaagaaaaaatgaagccGCTTTTGGGATGACGGATTGATTATAGCg
ctttctttgttgtttttttcactttgcacattttttatggcaatatattt
tactttcaacccggcttttgtgtaaaaactacacGGGACACGCGTTTTTA
GATGGGAAATATAAGAGGCTTCATCATCCAATAGTCTCATCTCTAGCTCT
TTTggggcttaaaactcaatggGTGATTATCATCGGCTATCATATTGATT
TCGatattctttttattatttcaggAAATCAGTCGTCTAAAGGAAGAAAA
CGACACTTTGAAGAGGAAAATCACTACTTTGGAAAAATCGGTACTTTTTA
CTTTAAACGaactaattttctaaaaaaaatccaaaaaatcgcATTTCGTG
GGAAACtttttcgtggttttgcctcatttcggacacatttctttcatttt
ctaagggatttttttaatttttggttaaaaatatTCGGGCTCTAACATTC
GTGGTTACGCcagaaaaatcgcgaaaaaaagcaaaaattagttcccttaa
ggtatggaTAGTTTGCTATCTCAATAGCATCAACCCATTCTCCCGTTTAG
AATTGTATTATTTCCGAAGGAAACCTATTTccattgaaacattttttcag
tACAAGATAGTAAAGTTGTTTATTAAGGCGAACCATGAAATGAATACGCA
ACGAATTACGTTTTCAACATTCTTTTTCAGACAAACTCGTCTCTGTCAAC
TCAATCAAGGTTACGAGCGGATCTAGAAGAAGCTCAAAATAATCTATCCT
CCTCCTCGCCCAGAAAGGTTTTTCTTGGCTTTCACTCTCATTAGTaaaaa
aaTACACAACCTTTATTTTAtgttgaaaattcaattttaccAGGTTGAAT
TGGGAGGGCTCTTTATTCATATCAAAGCTTCTTAACGTGTGATTTCAACT
TAGCTTAGGGTTAGCTTAGATTAGATTTTAACTTAGTTATTTTATTGTTA
CCTCTAAGGATTTGTTCTAATTTTGAACGTAAACTCGAATATTTAGTTAA
AATGCACTTCTCAAGTTTCTTTCCGTTTTCAAAGAACGCCTGTTGATTTC
TTACACGTGtagttttttcagatgaaaTTAATTGTTGGTTTGTTGGGTGA
AAAGctcaaaccaatcaaaatcatataaaagaaaatgtttgttttcgttt
ttcagGATGGCAGCGAGAGAGAAATGCTTTCTGACAAAATATCTTCACTG
AGCGACACTTTGAGAGAGGTAAAATTGGTTTATTGCTCAAGAATCAGTAA
TATAAATTTagtctcgggtacctaatagccgggggggggggttgggtgga
aaaagtctcaaaaattaataaacggggggagggggctgaaataagaatgt
cctgggtagaaaatttaGTACATAGTGTATTCCTGTTCTTACAATATgat
ctttcgaatgttttaacATATAAACCTCTTCGAAATTTTATGATATTAGA
TttcgaaaaagagaaaataaggTTAGGTGTGAGGTAGGAATCGAAGGAGC
CAGAAGCGAAGGGTCATTCTTTCTAACTTCGCAATCCTTATTCCAGGCTG
AGTTGAATTACAACAAGAAGTTTTCATCGGTTAATGAAGAACTGGTTGAA
GCCAAGGTATTCATTATTTCATGTTATTAAATGGCGTCCCATGTTTTCAA
GCAGTGTCTGTCCTTCTACTTGACTTGTAATATGCCGGTTGTCGGAAAGC
ACCACGGCTCTCAGAATGTCGTTTATATAAATAGAAGAATATCTCCtcga
gtttttgaaaaaatatttgtatcACTGATGATACTGACCTTGCGACTTTT
TTACTGAAGAGGAGGCCTCATTGAAActtcaatcaatttttctttttcag
catTACATTTTGAACCTGCAGCACGAATTAGAGACTTTACATGGGGTAAG
GAATGATTGTAAAtttcaaatgattttatttAGCCTTGGTTTGAACTCAC
TCGTTGTATCTATAGACCTAGACGtaacgaacatcacttgcctcgttttg
aaatttccatggggattaactcccagcggattttattaaaactacttcct
attcataaaaaaataatttaatgtcttaagagacataatcaccatggtta
ttgtttgaatacgaggcgagtgatattcatgacgtattttatgaaaagga
cTATTGTGTAGACCCTGCCCCACTTGAAAATTAGGTAAAACTTTCGTCCC
GGTGGCAAATGTGCCCCACAAGTTTAGTCCTACTgggaaatttacttttt
ttatccCCAAACTGAAATTCAACggaaaaaaattacactccaaaacctTC
AACATTGGACTTTTTGAACtgggaacaataaaatttatatctTCATCTGG
AtttcaataaaataatttcacCCCCAATGTGggggaaaagttccaccggg
gtgtgagacaggggtgtatcatgCTTCTTCACGATTCTTAGTTTGGTGTA
AAGGGATGTCATAACGCTATTTGACTCACTTTTATACCTTAGGAATTTTG
TAGCAACATTAAATTCAATACTTTAGGAATTCGACAAGAAGTTTTCTGAG
ACCACTCAATtcaagaatttgaagaaaatgttaGAAGGGAAGAACACGCA
GCTGAAGGAGCTTCGCGTTCGTGTTAAAAAGTAAGCGTTATAAGATACAT
ATGTATAATTGAGCAAATCCCCGAAAATTAGGATAActcatttttcgaaa
agaaatgTTTATTATTGTTGTGGAGATAAATAAGGTTTTTGATACTCAAG
GGTCTTGATTGAGATTGTAGAGCATACAACATTACTTCGATcaaacgccc
cgggcgtttataatttgtttttttttagtttttaaatttttccttCAAGA
AGAGGCTTTTATTCGAGGGGTGTTTAAAAGAagagggcgtttattcgaag
taatacggtaaatGAAGATGACTCGATAAAGGATATTTCACTAAATCTTT
TATCAGACCTGGCAGCTTTGAATTTTTCTCTTCTGATTCTTGTCTTCATT
TCACTTTGTTTTCTCTAGATATGAACCTGATTGCGAACTGTAG Coding sequence (CDS) from alignment at sc0000089_pilon:91593..98585+ >XLOC_044150 ID=XLOC_044150|Name=XLOC_044150|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1824bp|location=Sequence derived from alignment at sc0000089_pilon:91593..98585+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGAGTGGAATGGGCTTGAACGATCACCATGAGGAAGAAGTtaagaaatt
cttgaaatttgctCGTTACAACCGCCAACAACAACTACGCTCTGTTGAAG
GAAGCTTCCAAGATCTTAAAGACAGCCGCAGAGTGGAATGGGCTTGAACG
ATCACCATGAGGAAGAAGTtaagaaattcttgaaatttgctCGTTACAAC
CGCCAACAACAACTACGCTCTGTTGAAGGAAGCTTCCAAGATCTTAAAGA
CAGCCGACTTCAAGAGGACACGTTCACAAGTGATGAAGTTCAAGAGATGA
TTGACGGCTTGATGGTGGTTGTCAAAGGAGCTGTAGAAACAGAACTGTTG
AACGCTGCTCACACCAATGTCCTTCTGCTCTTCCAGTTATTCAGCCAAGC
TGAAAGATGGCATCTCAAATTGCAAGCTGATATCTCCGAACTGGAAAACC
AACTTCAAGAGGACACGTTCACAAGTGATGAAGTTCAAGAGATGATTGAC
GGCTTGATGGTGGTTGTCAAAGGAGCTGTAGAAACAGAACTGTTGAACGC
TGCTCACACCAATGTCCTTCTGCTCTTCCAGTTATTCAGCCAAGCTGAAA
GATGGCATCTCAAATTGCAAGCTGATATCTCCGAACTGGAAAACCAGAAG
CTTTTGAAGGATATTGCTGATTTTGAGGAGCAAGAAGCATCTGGTcgaag
aaacaaaaatcttGAAGCTTTTGAAGGATATTGCTGATTTTGAGGAGCAA
GAAGCATCTGGTcgaagaaacaaaaatcttGATTTGTCAAATTTGGCGAA
AAGCAAATTGGAGCCTTTGAATGAAGGTGGATCTGCCGCCTTATTGCAAA
TGGATTTGTCAAATTTGGCGAAAAGCAAATTGGAGCCTTTGAATGAAGGT
GGATCTGCCGCCTTATTGCAAATGgAAATCAGTCGTCTAAAGGAAGAAAA
CGACACTTTGAAGAGGAAAATCACTACTTTGGAAAAATCGgAAATCAGTC
GTCTAAAGGAAGAAAACGACACTTTGAAGAGGAAAATCACTACTTTGGAA
AAATCGACAAACTCGTCTCTGTCAACTCAATCAAGGTTACGAGCGGATCT
AGAAGAAGCTCAAAATAATCTATCCTCCTCCTCGCCCAGAAAGACAAACT
CGTCTCTGTCAACTCAATCAAGGTTACGAGCGGATCTAGAAGAAGCTCAA
AATAATCTATCCTCCTCCTCGCCCAGAAAGGATGGCAGCGAGAGAGAAAT
GCTTTCTGACAAAATATCTTCACTGAGCGACACTTTGAGAGAGGATGGCA
GCGAGAGAGAAATGCTTTCTGACAAAATATCTTCACTGAGCGACACTTTG
AGAGAGGCTGAGTTGAATTACAACAAGAAGTTTTCATCGGTTAATGAAGA
ACTGGTTGAAGCCAAGGCTGAGTTGAATTACAACAAGAAGTTTTCATCGG
TTAATGAAGAACTGGTTGAAGCCAAGcatTACATTTTGAACCTGCAGCAC
GAATTAGAGACTTTACATGGGcatTACATTTTGAACCTGCAGCACGAATT
AGAGACTTTACATGGGGAATTCGACAAGAAGTTTTCTGAGACCACTCAAT
tcaagaatttgaagaaaatgttaGAAGGGAAGAACACGCAGCTGAAGGAG
CTTCGCGTTCGTGTTAAAAAGAATTCGACAAGAAGTTTTCTGAGACCACT
CAATtcaagaatttgaagaaaatgttaGAAGGGAAGAACACGCAGCTGAA
GGAGCTTCGCGTTCGTGTTAAAAAATATGAACCTGATTGCGAACTGTAGA
TATGAACCTGATTGCGAACTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:91593..98585 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 889-912:6970 |
| Aaloc | 784-885:6477 |
| Aaloc | 739-783:5801 |
| Aaloc | 679-738:5497 |
| Aaloc | 616-678:5106 |
| Aaloc | 529-615:4631 |
| Aaloc | 463-528:4175 |
| Aaloc | 391-462:1587 |
| Aaloc | 325-390:1250 |
| Aaloc | 130-321:794 |
| Aaloc | 1-126:1 |
|
