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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:193061..199178+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044145 ID=XLOC_044145|Name=XLOC_044145|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6118bp|location=Sequence derived from alignment at sc0000089_pilon:193061..199178+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACAGGAacagaagaatatttttgggtGCAATGCGAGTATCCACA
ATGTATGAAATGGAGAAAGCTGCTTTCTGGTGTGCAAGATGAGATAAAAA
ATATCCAATGGTATTGTCACATGAACCCTGATAAAGCTTACAGTTTCTGC
GATGCTCCTCAACAGAAAATGCAAGTCAAGAAAGGGGAAACTGTCGTGTT
TAGTGAATTGGAGCTTGGATCTTTGGTCATGGCGAAAATGGCTGGTTATC
CTAGGTATGGCGATTCTGATTTTAGGGCTATTCCAAGAAATTGTCAACCA
CAATTGGAGTTTATAAGCGATTGAAACGCCTCGGACCGGGTTGCAGTGCT
CCTTACTGGCTATCCAGTCAAAAATAAGCGTGAAATAATGCACCCCTTCC
TCTTGAATGGCCgcttagaaatttttattttcaaatggtTGTGAATCGTG
TCATCAAAATATagttttggtaaaatttgatcaaacttaaatttttgtct
ttttttttattaagttGGCCAGCAATCATAACAAAAGATCCAGCAGAACC
TGAGGGTAGTCATATAATTCGCTACCAGGATGGAACAAATGATCCTAAAT
ATTATCATGTGGAATTTCTCGGTCAAATGCATACCCATGCATGGATCTCT
GCCAGACAAGTTCAGATATACAATACGTCCTCTGGTATCCTTGTGTTCGA
TGAACGggcaatgaaaaagaagaaattgaaagaagaatttttgaaatcaa
aacaagaagCTTCaacttttatgaatttttcacCAGAAGAAAGATTGAAG
AGGATTATTTTTCAATGGAAGGAACCTCCTAAACCTGTCAGGTAAGTTTC
CCCTGACGAAGACACATGTTTTCAAAAGTCTTCTATGTTTTTGCAACATC
CTTATTTTGAAATGTCGAATGGGtgatattttcaagtttgatATCTGTTT
TAGGGACATTGGCACTGCAGGGCCAAAactaaaagtgaaatttccaggGC
CTTCTAAAAGGAGGGGAAGAAAGCCCAAAGAAAAACCATCAAATGAAGAT
GATCAAGAAGTACCGACACTCGATAACCAAAACATTGTACAACAACACGA
TTTAAGTCAATTCGAAACTGTAAGCTTATATAATTTCAACTGAAATCCGA
CGTTATCTGACGAAGTTTTATATTATTTCTGATTCATTGATTTGGACTTT
gggtttttcataaaaatcagcTTAAACcctttactttatttttgcattag
aaaaatatgacaaacGAACATATAATAATCAGAGGGTCACGAAATTAATA
TAACAACAGTTGCAGTTTGGGACCTTTTAAATGTAACCAATAATCCtttt
caatttaatcaaggtatttttccactgtttacttttacatttcactttca
atcaattttttccTTGCAGAGAATGATGAATATTAATGGAACATTATGTC
CAGTCTTAGTTCCGCAAAGTACTTCCAGTTTCCAAAATTACCAATCATTT
CCACAAACTCCAAGCTGGAACATTTGGGGACAAGCAGCTTCCAAAAATCC
ACCAGCCTCTCCTTATAATGTGTTCGATTTCAACAATAATGGCAACACTG
CCCCACAAAGACCATCAACTGATCAGAAAAGTTTACAAAACGCAATGAGG
GTTAAAAGACTACAAAGCCCAATGGCAGCTGCCAATAGATACAAAAGTGT
TGTCCCTGTAAATAGATCAAAACCAATCTTAAAGAAACGTACCAAAGAGT
CAGTTCCAAAGAAGAAAACTAAGCAAGAGGCAAAAGAGGAAGGTTCAGCT
CAAATAACTACATTTGAAAATGTAAGGAATCATGTTATTGTTTTCTTTGT
ATAAAATGAAACCtttcattttgttcattttaattTGATTCCCATTGGAG
AAGGCCAATTGGGGGATCGTTATTCTCCTAGGAAAAGGAATCTTTTCACA
GTTCAAGATTGTCCAATTCATACCAGCAAAGTGAACAAGTTGCGAGGATT
AAAAACTTAAAGTAATTGTGAAATTAACCTTTAAATCATTCAGTACATCT
AACGATTATATAAACATGAAGCTTTAAGTAATGTACTTTTAGATGttttt
ttAGACAAATATTTTAAGTTAGATTAAAATTAACTTTAATTCTTTTTCGT
CATATCATTTCCAGGAGGAGAGTTTCTGGAAAGAATTCAAACCATTTTGG
GAAGATTGTATAAAGagaaatataaatgaaaagaaaatgagTTATGTTGT
TAAGTGGCATGGGAAGAAAATCAGCCTGTTCAAGTTTTATCAAACGGTTC
AACATGCAGGCGGCTATAAAGCGGTGCGTATGAtactacagttgactctc
tctaattcgatcttcaagggatcaaagttttattcgaattagagaaagat
tcaaattacagGGAGAGTAATTTTTAAGCCACCTTTAAGCCGATGGGGAC
CAATATTttggttcgaattagagagagttgactttACTGGACTGTACTCT
ATCGAAAAAGCATTTTGCTGTACTTTTATCAAAATGCCATTAAAAAGAAA
GTCTTTACAATAGAATGCTGGCTGAATGTCGTCAGAACATCGCACTTATC
TCAAGTCAGCGTATATCTTCACTGTATTGTTTTTGTCATTATGGAGACAG
ATATCTGGATTGAGACTATGTTCACACATAAGGCTTTCATATCGGTTCAA
AACGGATTAGAAGTGACGTCAAGTCTGTATTTGGCCAATAGAACAGTTTC
ATTTCATCTCAGAACGATGCGAAACCAAATTTTGTGAACCTGATCCTATT
TAAGGTCTAGAAATCCTTTTTTCATCTGAAGCCATATAATTTTTCATGCT
TCGTTCGTATTCTCAGTGTAATAAGTATTTTATCTTAATTAAAAGCTAAT
TGTATTTTTTGTTCCAAAGCTTATTGACTTTAATAAGAAATTAgtaatca
atcaaatcaaattagtAGTAATCAATAATTTCAGGCGACCAGTCATTGGA
AGATTTGGACAAATATTTGTTGCGAAGTCATCGGAAAGATGTTTGTAGAT
AATACGTTTGCTACACTCAAGAAGGCTTACAGAAAGTAAAGTTCATTTCC
TTGCTTCTTTCTCTCAGTTTGTTAGTCTGTTGAAAGAGCTATTCAGAATT
TCAGGGCGCTTGAAAAAATAGTGCTAGGCTGTTATATAGTTTTATCGAGG
ATTGTTGAGTACATATAGAACATCATAGATTAGAATAGGATTCAAGACAA
GACTTCTCCGTAACCAATCCCAAtttttttATAGCATCTTGCTCCAGTTC
GAACAAGAAAGAAAGTGTaagatcaaatttttttcatttgcgaACCTAAC
CTTCCCCCACTACAAAACAAGTGGaatgacctaccatacgtgcggcctTT
AAGGGtttattttccaagcttcccaaagtgcactgtaagggttgaaatca
gcaaagatgagaaaaattgcactctaagggtgtaagaTTTCGACAAGCTG
ACAATATTTggcctgaaaatggtcaaaatttataaaaaaatgcaccaaat
ttagaaaaaattcttctgcattgtaagggttcggtttcaaaggcctaatt
ttgggccgcccgtatggtcgtttttgaatcgagggccccctcccccgggg
gaatggaaaattaaATAACGCTTTTAGAATGAACGAGCCTCTGACGTTGA
AGTTCAGAAtacgtcatcggaaaaaaaggttattgattttttctttcgag
ctcgattatgattatttttaagacaccgacctttttattttaCCTGTAAC
AtccaaaagagaaaaaatgtctATCTGCAAGCAAAGAATTCGAGTGGTTG
GCGGGATTCCTGTCTaataaatggaatttttgttttgaatagaTCCATTG
CTAGTCAAAAAGAGACAAGAGGAAAAGGCTAAAGCAGCAGAATTGGAGCA
GTTGGCGAGGACCCAATCCACTTTACCAGGAGGTGGGCTAGCTATTGTAC
CACGACAAAGCCCTGTCTATCTGCCTGAGGATTTGGGATTACCGCAATCT
TTGAATGTGTTGGATTCTTGTGAAGATGGATCCTTACAACTACCAGCATT
GAATAGCACTGTCGGTGACATCTTGAAAGGACTGGCACCCTCCACACAAA
AGAAATCCAAACCAAGTATGTATGATTCCTTACAAATTTCAGAGTGTTTT
GCTCCAAATTCCTTCGTATAAGTTAATGAGAATATAGAATTTTGATCAGA
ATGCGAATTTAGAAGTAACTCTTATCacaatgaaaaagattttctgagTG
CTTATCAATCAACTTCAAAACAACATATTCTCTTTATCATTTAGGTTTAG
TTGACCTTCCAAGTTCAAACCCAGATTCACCAATGTTTTGCTTTTCTCAA
GGTAAGAAGTTCACCCTCTTTGATTAAATCACTGGACAAAGATATAAGAT
GCTCTTTTGGAGTACAATTGACGATTGGCCACGAGTAATAAGGAGACGGA
GAAAGTTGTACCCATAGTACGagaatcaaattaaaattttatccttGTTA
CGAGTGATTTACCGTTCATTGTACGAGTTTCGACCGACATGTGCGATTTC
TGAATAATTGTCACCTTTTTCCATTTACACGCAAAGGTGCTCTCAAAATC
TTTCTCGATCAATCAAATTGGACGTTGATTACTGAGATAAACTTGTGTGG
AATTTCTGTAAACATTTCGCTGAATTAGGAATTGAATTAGGATGAGGATG
AAATGTTCATGTTTATTGACTTTTAGAATCGCGAGCCTCTTCTTCGCCAA
CCTTACCTTCGGAGATCGGCATGGATGCGGCCCTCCTTCAACTCGACACA
TTAGAAGGTGAACTATCAACTCTGGGAGGCCTTGATGATGTCGGACAAGA
TCAATCTCTGCCCGAAGATGTTTTCTTAGGTGAGGCTGTTTTCAAATGAG
cctctttttattttgaattatttttcaccaCAGATTAAATGGCTATCGAT
CTTCGcagttttcttttcataccGCGCGTCTGGTCACTTGTTCATTTCAC
GATCGATTAACTATTAGCTAGTTAGTTCATATAAATATTTGGGGATACGT
AATTAAAATGTTTCAcattaacaatatttttttagataacAAGTCAACGC
CCGCTTTAGAAGAACAAAACGAACTCAAGTAAGCGATTTCATTCAAGCTT
TCAAAACTGATATTTTCGATTCTTTCAGTAAGCTTTGATCATTTCAGGTA
TcagatttgaattctttttaagTGCGAAGTATGACAGTTTCATTTCAAAT
CAGCTGCCCTTAGTACCTATTTTAGTATAAACTTGATGGATTTCAAATTG
GACAACGTAGCTTTTTTAACGTTCTTCAGGTATTGGTTTAAAAGAGTTTC
CAAGCTTCTCTGTCTTTCATGATGTTGATCGCTTCTTTCTTTGTTAATCC
AGTATCCTCAAGTATGACACTTTTCAAGGTAGTGAAAGGTCTTCCAGTCT
TTCTCTTCGAGTCGGGTGACCACATCAATAGCTGCGAGGCGGGCTCTTCT
CGACGTGCTACGTGACCGGCGAGAGCAAGTCGACGTTTTCGTATTGTAAC
TCTCGTATTGACACTTTCTCAATAGAGCATATCAACCAGTGAGTGGTTCA
TCAACACAAGACTCTGTTGAATTTGATGCAGTGATGGGCGAACTAACTGA
TCTTGAAGGTATCCTTATATAACACAATCATTacagtttcaaattttttt
cttccttttttgcTTGAGGATCTGAAAGTGTTCATTCTTTAACAGAGTGA
CTTTAATAATGCTTAATCCTTTCAGTTCCAGAGCTTTGAACATTTTGCGT
CAGCGCATAGTCTCTCGCTAGAATATTATATAGTAAAAGACATCGGTTAA
GGGGTAAAGGCGCCCgcaaaccaaccaaaatttcatgctctttcataTAG
TAGCTACGAGAGCTCCGGAGATATAGCCCTATGATGCTGGGTCCGCGGGT
CTCCGGGTCTCCGGGCCTGAATGGGTTAAATTCTTAATCTTATTTCTTGC
TTTTGCTTTCAGACACTCTACTAGACATGGCAGGAGATCTTTTGGGAGGC
ACAAAGCTCCCCAGTTGA Coding sequence (CDS) from alignment at sc0000089_pilon:193061..199178+ >XLOC_044145 ID=XLOC_044145|Name=XLOC_044145|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4212bp|location=Sequence derived from alignment at sc0000089_pilon:193061..199178+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACAGGAacagaagaatatttttgggtGCAATGCGAGTATCCACA
ATGTATGAAATGGAGAAAGCTGCTTTCTGGTGTGCAAGATGAGATAAAAA
ATATCCAATGGTATTGTCACATGAACCCTGATAAAGCTTACAGTTTCTGC
GATGCTCCTCAACAGAAAATGCAAGTCAAGAAAGGGGAAACTGTCGTGTT
TAGTGAATTGGAGCTTGGATCTTTGGTCATGGCGAAAATGGCTGGTTATC
CTAGATGGAAACAGGAacagaagaatatttttgggtGCAATGCGAGTATC
CACAATGTATGAAATGGAGAAAGCTGCTTTCTGGTGTGCAAGATGAGATA
AAAAATATCCAATGGTATTGTCACATGAACCCTGATAAAGCTTACAGTTT
CTGCGATGCTCCTCAACAGAAAATGCAAGTCAAGAAAGGGGAAACTGTCG
TGTTTAGTGAATTGGAGCTTGGATCTTTGGTCATGGCGAAAATGGCTGGT
TATCCTAGttGGCCAGCAATCATAACAAAAGATCCAGCAGAACCTGAGGG
TAGTCATATAATTCGCTACCAGGATGGAACAAATGATCCTAAATATTATC
ATGTGGAATTTCTCGGTCAAATGCATACCCATGCATGGATCTCTGCCAGA
CAAGTTCAGATATACAATACGTCCTCTGGTATCCTTGTGTTCGATGAACG
ggcaatgaaaaagaagaaattgaaagaagaatttttgaaatcaaaacaag
aagCTTCaacttttatgaatttttcacCAGAAGAAAGATTGAAGAGGATT
ATTTTTCAATGGAAGGAACCTCCTAAACCTGTCAGttGGCCAGCAATCAT
AACAAAAGATCCAGCAGAACCTGAGGGTAGTCATATAATTCGCTACCAGG
ATGGAACAAATGATCCTAAATATTATCATGTGGAATTTCTCGGTCAAATG
CATACCCATGCATGGATCTCTGCCAGACAAGTTCAGATATACAATACGTC
CTCTGGTATCCTTGTGTTCGATGAACGggcaatgaaaaagaagaaattga
aagaagaatttttgaaatcaaaacaagaagCTTCaacttttatgaatttt
tcacCAGAAGAAAGATTGAAGAGGATTATTTTTCAATGGAAGGAACCTCC
TAAACCTGTCAGGGACATTGGCACTGCAGGGCCAAAactaaaagtgaaat
ttccaggGCCTTCTAAAAGGAGGGGAAGAAAGCCCAAAGAAAAACCATCA
AATGAAGATGATCAAGAAGTACCGACACTCGATAACCAAAACATTGTACA
ACAACACGATTTAAGTCAATTCGAAACTGGACATTGGCACTGCAGGGCCA
AAactaaaagtgaaatttccaggGCCTTCTAAAAGGAGGGGAAGAAAGCC
CAAAGAAAAACCATCAAATGAAGATGATCAAGAAGTACCGACACTCGATA
ACCAAAACATTGTACAACAACACGATTTAAGTCAATTCGAAACTAGAATG
ATGAATATTAATGGAACATTATGTCCAGTCTTAGTTCCGCAAAGTACTTC
CAGTTTCCAAAATTACCAATCATTTCCACAAACTCCAAGCTGGAACATTT
GGGGACAAGCAGCTTCCAAAAATCCACCAGCCTCTCCTTATAATGTGTTC
GATTTCAACAATAATGGCAACACTGCCCCACAAAGACCATCAACTGATCA
GAAAAGTTTACAAAACGCAATGAGGGTTAAAAGACTACAAAGCCCAATGG
CAGCTGCCAATAGATACAAAAGTGTTGTCCCTGTAAATAGATCAAAACCA
ATCTTAAAGAAACGTACCAAAGAGTCAGTTCCAAAGAAGAAAACTAAGCA
AGAGGCAAAAGAGGAAGGTTCAGCTCAAATAACTACATTTGAAAATAGAA
TGATGAATATTAATGGAACATTATGTCCAGTCTTAGTTCCGCAAAGTACT
TCCAGTTTCCAAAATTACCAATCATTTCCACAAACTCCAAGCTGGAACAT
TTGGGGACAAGCAGCTTCCAAAAATCCACCAGCCTCTCCTTATAATGTGT
TCGATTTCAACAATAATGGCAACACTGCCCCACAAAGACCATCAACTGAT
CAGAAAAGTTTACAAAACGCAATGAGGGTTAAAAGACTACAAAGCCCAAT
GGCAGCTGCCAATAGATACAAAAGTGTTGTCCCTGTAAATAGATCAAAAC
CAATCTTAAAGAAACGTACCAAAGAGTCAGTTCCAAAGAAGAAAACTAAG
CAAGAGGCAAAAGAGGAAGGTTCAGCTCAAATAACTACATTTGAAAATGA
GGAGAGTTTCTGGAAAGAATTCAAACCATTTTGGGAAGATTGTATAAAGa
gaaatataaatgaaaagaaaatgagTTATGTTGTTAAGTGGCATGGGAAG
AAAATCAGCCTGTTCAAGTTTTATCAAACGGTTCAACATGCAGGCGGCTA
TAAAGCGGAGGAGAGTTTCTGGAAAGAATTCAAACCATTTTGGGAAGATT
GTATAAAGagaaatataaatgaaaagaaaatgagTTATGTTGTTAAGTGG
CATGGGAAGAAAATCAGCCTGTTCAAGTTTTATCAAACGGTTCAACATGC
AGGCGGCTATAAAGCGGCGACCAGTCATTGGAAGATTTGGACAAATATTT
GTTGCGAAGTCATCGGAAAGATGTTTGTAGATAATACGTTTGCTACACTC
AAGAAGGCTTACAGAAAGCGACCAGTCATTGGAAGATTTGGACAAATATT
TGTTGCGAAGTCATCGGAAAGATGTTTGTAGATAATACGTTTGCTACACT
CAAGAAGGCTTACAGAAACATCTTGCTCCAGTTCGAACAAGAAAGAAAGT
CATCTTGCTCCAGTTCGAACAAGAAAGAAAGTaTCCATTGCTAGTCAAAA
AGAGACAAGAGGAAAAGGCTAAAGCAGCAGAATTGGAGCAGTTGGCGAGG
ACCCAATCCACTTTACCAGGAGGTGGGCTAGCTATTGTACCACGACAAAG
CCCTGTCTATCTGCCTGAGGATTTGGGATTACCGCAATCTTTGAATGTGT
TGGATTCTTGTGAAGATGGATCCTTACAACTACCAGCATTGAATAGCACT
GTCGGTGACATCTTGAAAGGACTGGCACCCTCCACACAAAAGAAATCCAA
ACCAAaTCCATTGCTAGTCAAAAAGAGACAAGAGGAAAAGGCTAAAGCAG
CAGAATTGGAGCAGTTGGCGAGGACCCAATCCACTTTACCAGGAGGTGGG
CTAGCTATTGTACCACGACAAAGCCCTGTCTATCTGCCTGAGGATTTGGG
ATTACCGCAATCTTTGAATGTGTTGGATTCTTGTGAAGATGGATCCTTAC
AACTACCAGCATTGAATAGCACTGTCGGTGACATCTTGAAAGGACTGGCA
CCCTCCACACAAAAGAAATCCAAACCAAGTTTAGTTGACCTTCCAAGTTC
AAACCCAGATTCACCAATGTTTTGCTTTTCTCAAGGTTTAGTTGACCTTC
CAAGTTCAAACCCAGATTCACCAATGTTTTGCTTTTCTCAAGAATCGCGA
GCCTCTTCTTCGCCAACCTTACCTTCGGAGATCGGCATGGATGCGGCCCT
CCTTCAACTCGACACATTAGAAGGTGAACTATCAACTCTGGGAGGCCTTG
ATGATGTCGGACAAGATCAATCTCTGCCCGAAGATGTTTTCTTAGAATCG
CGAGCCTCTTCTTCGCCAACCTTACCTTCGGAGATCGGCATGGATGCGGC
CCTCCTTCAACTCGACACATTAGAAGGTGAACTATCAACTCTGGGAGGCC
TTGATGATGTCGGACAAGATCAATCTCTGCCCGAAGATGTTTTCTTAGat
aacAAGTCAACGCCCGCTTTAGAAGAACAAAACGAACTCAAataacAAGT
CAACGCCCGCTTTAGAAGAACAAAACGAACTCAAAGCATATCAACCAGTG
AGTGGTTCATCAACACAAGACTCTGTTGAATTTGATGCAGTGATGGGCGA
ACTAACTGATCTTGAAGAGCATATCAACCAGTGAGTGGTTCATCAACACA
AGACTCTGTTGAATTTGATGCAGTGATGGGCGAACTAACTGATCTTGAAG
ACACTCTACTAGACATGGCAGGAGATCTTTTGGGAGGCACAAAGCTCCCC
AGTTGAACACTCTACTAGACATGGCAGGAGATCTTTTGGGAGGCACAAAG
CTCCCCAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:193061..199178 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2053-2106:6065 |
| Aaloc | 1969-2049:5627 |
| Aaloc | 1927-1965:5138 |
| Aaloc | 1774-1923:4779 |
| Aaloc | 1717-1770:4347 |
| Aaloc | 1444-1713:3895 |
| Aaloc | 1411-1440:3286 |
| Aaloc | 1309-1407:2985 |
| Aaloc | 1150-1308:2165 |
| Aaloc | 748-1149:1420 |
| Aaloc | 583-747:955 |
| Aaloc | 256-579:516 |
| Aaloc | 1-252:1 |
|
