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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:306627..309776+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044139 ID=XLOC_044139|Name=XLOC_044139|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3150bp|location=Sequence derived from alignment at sc0000089_pilon:306627..309776+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGaggttctttttgtttttcctaTCGATTGCACTTTGCAATGCTGTTAA
ATTCACAAAGGAAGGTAAGTGGTTTACTGCCTTGTTGTCAAATTTGACAA
ATAATTTAcgcccctgtctcagtgacccggggAGAAATTTCACACATTAA
GGATCGAGAATTTAAATCCTTTTGCTTTTAATGAGTGGGATTTTAAAACC
CTAAATGAAATCTACTGGGGATGACTTGTAGAGTTTTCTTTCAGGTAGAG
AAGGGAGTGACTATTGAGTCTGTGACACAAAGTCCCTACACTTTCATCCA
TTTTGAGCCAATGAAGAACGAGATGGAAAGGAAGGAAGGAAGGAAGCATA
ATGACTATAATTGAAATGACACTGATTCTGTTTATTTTATCTAATAGATA
TCCAGTTTTTTGGTTGTTACTCCAATAGCATGTATATAGAGTTAGCAACT
TACAAGATGGGGCTTCACGATCGAGAAtttcaaatacatttcaaaGGATA
CAAAGATGATGAGGAATGTTCTCTTGAGTCTGGCGAAGACTTCATTAAGT
ACGAATACTTTTATTTGGGCCACTATTACAGTCATTGTGGTATTCAACAG
ACTAGACGAGGGAACAAAATCATTTACAGTCAAACCGTCATGCTGACATT
CGGAAAAGATCCTGTCTCAAAGCTGGTTCATCGAACCGAACAAATTGCGT
TCGAATTCGAATGCGTTTTAGATGCTGATGCAAAAGTGAAGCTTCTTGGA
CCTGGACACGTAAATGTCTCCAGTTTGGAGGAACAATCATTCGAGAAAAG
TAGGGTTTATATGAtgacaattctttttttaccaattttaaacTATTCAA
CAACATATAGACATTTAAGCAATGTTATGAAAACAtagggctaaaatttt
gcaacaaaaaaaaagaagaagtatAAGGACAAATTGTGGACAACTCCGAT
TTTACAGAAAGTACAAACAGTCGGGACCACTACAtgaaaaaggcaactat
tgccttaacgggaagaATTtgccgaacgggaaggtgaaaataacccgaaa
aggaaactgtttccagattgaaaatttcatcacttttctgttttccgttt
tggtcaagaacttttcatcaTCCCCGAACGGGATatagaatttttgtaaa
aaagcagATCTTTATTTCCTGATcgagaaaaagtttccaaatagggaaAT
CTTTAATTGGGAATAGGGAAAGTGGAATTAAGAAGTGattacccggtgga
tttcttaactacctggtgaatattatttattttccttCCTTTACAAGAGG
GACAAGTTTTAAACTTTCAACAGGAATTTCCGGAGTGCTCAGAGGCCACT
TTCCCGATTGGGAAACTGGTGAACTTCCCGATTTGGAAAGTCTAGTCATT
TCGGGAATTTttccaccttcccgttcgggaaatatttcccgttaaggcaa
tagttgccttttcCATGTAGTGGTTTCCGACTGACAAAGAAAACATGATa
agcaaaagatttgaaattcaaaataagaTCGGCAACAGCCTGATAAACAC
AGAATAAAAACTAATTCTCAATTCTAAAAGAAATTGTTTATTCTGCTAAG
CTTCGAATGAACTTTTGAGTGACTGAACAAACAGTTCACAGGATGGTGGA
TGAAGACAATGATGCTAAAAGGATTTTTTGCCATAAAAGCCAGTGTGCGA
TATTTTATTGCGCTGGTTAATCGAGACGGAATATCTTATGACAAACATGA
CTTCTAGAAATTCTTTCTCATTTCAAGACTATTGTTCTTCTTACTGCGAC
GGAAATGCTGTTAGAAAACACAACTGGACGCGAATTTTGGTATACAGACG
AAAAAGTTGTAACACTGACTGTTCTAAGGTCTTCCAATTAGGTTTCCACT
CAACTCCAAGCACAGAAAGTCACTAAACAGAAACTTTCTTTCTCCTTTAG
CGGACGTTGGCGAATTTGACATCAAATTGGTGCGAACAACTGACAACACT
TTTACTTCAGAAGATTCGACGTCGCAAATGAGACTTGGTGATCAAATGTA
CTTCAAACTCCACTTTGATACCGTCAGAGATGACCTGAAGATCGCACCCA
AGACATGCTACGCTGCAAGTGCAAAGAATTCTTCGGAGAAATACATCTTG
GTTGAGGACGGGTGAGCCACTAATCATTTGACTGGTTTAAGTACCAGAAC
TACGTGTGCATTTCCcgccattcgccaaattaaactcACGCAAAATTTAA
GTCATGAAATTTCCGAATTATAGGGCTATTTCagtatttttgcccaaaat
ATCCTGCAGCATCAAAATTGATTTCCTAATGAAGTACTAAGAGAAGAGTA
CATTATACACCCCCCTCAAATAGACCCACCGAGACTACTTCCCACTggga
aaattagccaaaatatcgtccccagtggaaaatatCCTCcgatttttgtc
cccactgaaagtAATCAAACAAACTAATCCTCCTTGCAAAATATTACCCT
ATTTCTCCcattccaactgaattttctgatttgaaaacaatgagttcaaa
tccccagccataaatcaatcctcatcgagttttagtccgttaattccact
ggctgaaaagtacctaccaggtctgtgagaaagggatATGTTATACAAAA
GGCGACAAAAGGGATAAATCAATGCAtacttcaaaaaatattatagtAAA
ATGCACCAGGCGTAACAAACCAATCAGTTTTCTATCGATCAAGTTTGAAC
AAAATAATCATTCGATTAATCGAACATGATTGTATGTGGTTTAACTGAAT
TTAGATAGAAAGGGAAAATTCAATTGGTTACGTCATGAACACAATGCGTC
ATTCATTGATTTACTTACATTTTTCATAGTTGTCCAAACAAAGCAGATGG
CACGGTTGAAGTGACCGACACCAACAACCAAAAGATCTTCGAATGGCAAA
ACGAGGCGTTCCGATTTTTCGGCGATTCCGATGCCGTCTACATCACTTGT
GACGTCACTGTTTGCAAAAGTTCCGACATGGCGGCTGAATGCAACCGATG
TGACGTCAATAATACAAGACGACGTCGCGGTTTAACTTCGTCACATAAAG
CGACATACTTGACGGTCTCTAACGGCATCAAATACACGTTGTTGTTGTAA
Coding sequence (CDS) from alignment at sc0000089_pilon:306627..309776+ >XLOC_044139 ID=XLOC_044139|Name=XLOC_044139|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000089_pilon:306627..309776+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGaggttctttttgtttttcctaTCGATTGCACTTTGCAATGCTGTTAA
ATTCACAAAGGAAGATGaggttctttttgtttttcctaTCGATTGCACTT
TGCAATGCTGTTAAATTCACAAAGGAAGATATCCAGTTTTTTGGTTGTTA
CTCCAATAGCATGTATATAGAGTTAGCAACTTACAAGATGGGGCTTCACG
ATCGAGAAtttcaaatacatttcaaaGGATACAAAGATGATGAGGAATGT
TCTCTTGAGTCTGGCGAAGACTTCATTAAGTACGAATACTTTTATTTGGG
CCACTATTACAGTCATTGTGGTATTCAACAGACTAGACGAGGGAACAAAA
TCATTTACAGTCAAACCGTCATGCTGACATTCGGAAAAGATCCTGTCTCA
AAGCTGGTTCATCGAACCGAACAAATTGCGTTCGAATTCGAATGCGTTTT
AGATGCTGATGCAAAAGTGAAGCTTCTTGGACCTGGACACGTAAATGTCT
CCAGTTTGGAGGAACAATCATTCGAGAAAAATATCCAGTTTTTTGGTTGT
TACTCCAATAGCATGTATATAGAGTTAGCAACTTACAAGATGGGGCTTCA
CGATCGAGAAtttcaaatacatttcaaaGGATACAAAGATGATGAGGAAT
GTTCTCTTGAGTCTGGCGAAGACTTCATTAAGTACGAATACTTTTATTTG
GGCCACTATTACAGTCATTGTGGTATTCAACAGACTAGACGAGGGAACAA
AATCATTTACAGTCAAACCGTCATGCTGACATTCGGAAAAGATCCTGTCT
CAAAGCTGGTTCATCGAACCGAACAAATTGCGTTCGAATTCGAATGCGTT
TTAGATGCTGATGCAAAAGTGAAGCTTCTTGGACCTGGACACGTAAATGT
CTCCAGTTTGGAGGAACAATCATTCGAGAAAACGGACGTTGGCGAATTTG
ACATCAAATTGGTGCGAACAACTGACAACACTTTTACTTCAGAAGATTCG
ACGTCGCAAATGAGACTTGGTGATCAAATGTACTTCAAACTCCACTTTGA
TACCGTCAGAGATGACCTGAAGATCGCACCCAAGACATGCTACGCTGCAA
GTGCAAAGAATTCTTCGGAGAAATACATCTTGGTTGAGGACGGCGGACGT
TGGCGAATTTGACATCAAATTGGTGCGAACAACTGACAACACTTTTACTT
CAGAAGATTCGACGTCGCAAATGAGACTTGGTGATCAAATGTACTTCAAA
CTCCACTTTGATACCGTCAGAGATGACCTGAAGATCGCACCCAAGACATG
CTACGCTGCAAGTGCAAAGAATTCTTCGGAGAAATACATCTTGGTTGAGG
ACGGTTGTCCAAACAAAGCAGATGGCACGGTTGAAGTGACCGACACCAAC
AACCAAAAGATCTTCGAATGGCAAAACGAGGCGTTCCGATTTTTCGGCGA
TTCCGATGCCGTCTACATCACTTGTGACGTCACTGTTTGCAAAAGTTCCG
ACATGGCGGCTGAATGCAACCGATGTGACGTCAATAATACAAGACGACGT
CGCGGTTTAACTTCGTCACATAAAGCGACATACTTGACGGTCTCTAACGG
CATCAAATACACGTTGTTGTTGTAATTGTCCAAACAAAGCAGATGGCACG
GTTGAAGTGACCGACACCAACAACCAAAAGATCTTCGAATGGCAAAACGA
GGCGTTCCGATTTTTCGGCGATTCCGATGCCGTCTACATCACTTGTGACG
TCACTGTTTGCAAAAGTTCCGACATGGCGGCTGAATGCAACCGATGTGAC
GTCAATAATACAAGACGACGTCGCGGTTTAACTTCGTCACATAAAGCGAC
ATACTTGACGGTCTCTAACGGCATCAAATACACGTTGTTGTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:306627..309776 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 679-948:2881 |
| Aaloc | 469-675:1953 |
| Aaloc | 67-465:400 |
| Aaloc | 1-63:1 |
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