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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:388117..390522+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044135 ID=XLOC_044135|Name=XLOC_044135|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2406bp|location=Sequence derived from alignment at sc0000089_pilon:388117..390522+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGCTAAAGTCTGTGTTACGaatatttttcgtgattttttacATCAC
TCAATTAAGATGCGAAGACaaaaaaaCGTAAGTTTACTATCCCTTACCCC
AAGTACCCCAAAATAACTTCTTAAAATTTACAGCTCTGTTACTACGATCT
TGTCTTAGtgttattttataattttgaatCTCCTAGTTCGTTTTTCCGGG
ttttttttCTGACTAACtgtcagtagcgtggtggcagggatGGGCAGTTA
CGGCGGATTTTTTAGGGGCGGCACGCCGAAAGACAAGGGTCGGAAACAGG
CGCCTCTGATTACAAATTTTGGCACCTTTTACTTTTATACGCCTTAAAAT
TAAcaatttttcagctaaaaaaaaaagaaaaaacccaaaaaattttGTCG
AACGACCACGTGTTACATGCTAACCCTCCAATGCTAAACGTTCTTAACTC
GAGAATGTTTGAAAATAACACATTGCGCGAGGCAGACCATACTGACtttt
tttAACCTCGATTTTCAGGAACGCCCAACCGAAGATCTTAACCGATGATG
GTCACATTAAATTTCAATCGGCCAAAAATCGGAATATTTCTTTCGAGCTG
GAAGGTGCAGATGCGGACGTGCAGTTCGGCGATACTAGcatcaaacaaat
aaaaaattccgtaagaaagaaaaatttttccgactttaatctaatttctt
tgtttaatttttaagaatttttctattctacttttaaCTAGCCTATATAT
TAGGCCGTGGTTAGTGGATGGttaaagcttcaaaaaaaaagaaaaaaaag
tttttgaccacaaatatgCCCATAACCTTTGATCAAGAAAAGCTGAGACT
TTGATGTAATagacttttttgctcagtttgaagagctctatcacgtggta
taggtcttttttgattttgaaaaaatgcggtttttcaagcttggtaacat
ttaaATTCCGAATCAAAACCCTCAAATTGACCCAAAATCAATTATAAAAG
CTTGGTCAAGgacattttaaaactttttggtGGCACTGGCCATGGCCTAT
ATGTGGAGAGTTGGAAAACTTTATTTCCTTGTAAATATGAGTACACCGGC
CTATTTCATGGTACAGAATTTTTCCTGGCATCGTTTTATTTAATATTCTT
CTTACAGCTGGACAGTCATTCGTCAGATATCAAGAAACTCATCCAGGTAA
ACTGGCGCTGTGCTTTTTGtaattcagtttttgagacTCTTTTTGACGAC
GAGGGAGATTGTCACAATTAAGTACCCTGTCGTGTGCAGAGTTACTCAGT
TTGTATTGTATGAGCTTTATTTTTCGGTGTCATCCTGTGTGCACTGAGGG
CGTTCGTTCAAAACACATAGCATGTGACCTCCTCATCTTGCACAGCTCTC
CCTCACTCAATTGGATTGGCTGAACACCATGTATCTATTAATTATTTTGT
TGTCCAACCATTAATTCTGCTAATGACCTGACTTTGAAATCACAGTCATT
GTGTTTAATTATCGAGGCgtcttttcaacaaaattccTTTCTATTTGTGA
GAATTTTACGACCTCAAAATGACAAGGCATGTTTTTATTCCGACCCAGGA
CTTCGCCTACAATTAGACCTACGACAAATAAAGAGTAATTGAGTAACCAC
GACACTTGACCATTAACTGGTAATTTTGGTCCCCAATAAAAttctttcgt
ttttctctcttcaaatttttcactttcactttcgtttttacaGGTTGGAG
AGAACCGCGCATGCGCCAAAAGTAATCCTTGTGGAGAAAACGGTGTTTGT
GTGGATGCTTTaacaaccaatcaaaatcaGGTACTGAAGACGTCTCGTGA
AGATTTCATTTCTCCATGTTTTGTAAAAACCTGTCCTGTTAATTCTTAAT
GAAAACGATTTTAAACCCTACCCgaataaaaaagtcaaaagtaatTTTCT
GTTAGTTGAGGCGTGGTTGGTCCAATTGATGGGCTTtacgttttttatga
aaatatccaaaattttgaatcctaaaaatgttctttacatgttcctattt
tcaccattttgtgagtatttttgctctattttcctaagaaagtaAGTGTT
TGGGGACCCTAcctaaagccttaaaatgctcttaactcgttcttaacatt
ttggccacggaagccttatgttcttatatattttgttcttaaaaaaacgg
tCAGTTTTTCTCTCCCATCATAGGATGGTTACAGATGTGTCTGCAGAGGG
ATATACAAAGGCAAACATTGTGAGCAAACAGATCCATGTCTAGCTTTGAC
ATGCGCCAATGGTGGAGAGTGCCAAGAAATTGGTGGGAGAGCTATTTGTG
TTTGTTCTGCGCAATGGTTTGGTGCAACCTGCAGTGTTCCTAAACCACAA
ggtatg Coding sequence (CDS) from alignment at sc0000089_pilon:388117..390522+ >XLOC_044135 ID=XLOC_044135|Name=XLOC_044135|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1056bp|location=Sequence derived from alignment at sc0000089_pilon:388117..390522+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGCTAAAGTCTGTGTTACGaatatttttcgtgattttttacATCAC
TCAATTAAGATGCGAAGACaaaaaaaCATGCTGCTAAAGTCTGTGTTACG
aatatttttcgtgattttttacATCACTCAATTAAGATGCGAAGACaaaa
aaaCGAACGCCCAACCGAAGATCTTAACCGATGATGGTCACATTAAATTT
CAATCGGCCAAAAATCGGAATATTTCTTTCGAGCTGGAAGGTGCAGATGC
GGACGTGCAGTTCGGCGATACTAGcatcaaacaaataaaaaattccGAAC
GCCCAACCGAAGATCTTAACCGATGATGGTCACATTAAATTTCAATCGGC
CAAAAATCGGAATATTTCTTTCGAGCTGGAAGGTGCAGATGCGGACGTGC
AGTTCGGCGATACTAGcatcaaacaaataaaaaattccCTGGACAGTCAT
TCGTCAGATATCAAGAAACTCATCCAGCTGGACAGTCATTCGTCAGATAT
CAAGAAACTCATCCAGGTTGGAGAGAACCGCGCATGCGCCAAAAGTAATC
CTTGTGGAGAAAACGGTGTTTGTGTGGATGCTTTaacaaccaatcaaaat
caGGTTGGAGAGAACCGCGCATGCGCCAAAAGTAATCCTTGTGGAGAAAA
CGGTGTTTGTGTGGATGCTTTaacaaccaatcaaaatcaGGATGGTTACA
GATGTGTCTGCAGAGGGATATACAAAGGCAAACATTGTGAGCAAACAGAT
CCATGTCTAGCTTTGACATGCGCCAATGGTGGAGAGTGCCAAGAAATTGG
TGGGAGAGCTATTTGTGTTTGTTCTGCGCAATGGTTTGGTGCAACCTGCA
GTGTTCCTAAACCACAAggtatgGATGGTTACAGATGTGTCTGCAGAGGG
ATATACAAAGGCAAACATTGTGAGCAAACAGATCCATGTCTAGCTTTGAC
ATGCGCCAATGGTGGAGAGTGCCAAGAAATTGGTGGGAGAGCTATTTGTG
TTTGTTCTGCGCAATGGTTTGGTGCAACCTGCAGTGTTCCTAAACCACAA
ggtatg
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:388117..390522 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 346-528:2224 |
| Aaloc | 259-345:1744 |
| Aaloc | 220-258:1158 |
| Aaloc | 79-219:520 |
| Aaloc | 1-75:1 |
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