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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:524908..529494+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044129 ID=XLOC_044129|Name=XLOC_044129|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4587bp|location=Sequence derived from alignment at sc0000089_pilon:524908..529494+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACCCATTCAAACAACTTGCCCTTTTGCAGGCTAAAATGGCCGGCAT
GAGTAGGGCCCAGATTGAGGAAGCCATCCGAAACATGACCCTGGGAATAA
ACCCAACAGAACAAGAGCCAGACCTTACTACACCACAAAATCAACCTTTG
CAAGGACAGTCACAAAACGCTGCAGGTGGTTTTTCCTATACTGTTGATAA
TATAACCAGACTGAAAAGATATCTGATATTAGGTTCAGATAAAGCAAAAT
ACAAGGGTGGCTCTCAAgcagaaaatattcaaaatattccaGTTGTTGAA
GAACTTTTAAAGGAGGGTAAAGGAAAGGAAGTGATTGATTTGATCGTTCA
GTTTGCTCGTGAAGCACGTATCTCAAAAGAGGAGAACATTTTGATGGTAT
TACGTGATTGTATGATGTATCAGGGAGATGCCATGTATGAAGATAGGACC
ATACAACGAGCTGCTTATGACAGTATTGTCAAAATCTGTAATATCCCAAC
CAAACTTTTCCGATTGATGGAGCTTTGTGAACCATGTTATCAAAATAATT
GGAAGCCTTCAACCAAGCCAGTCAGTAAGACGCAACTACGGAAGAAAGCA
AAGCAAGAGGCAATACAAGCAGCTCAACAGCAGAACCCAGGGCCTTCCAC
CTCCACTGAAATCCCGGCCGCTCAACCAACGTCAGCAAAAGTGCCAGTTG
AAACATGTGAAATTGTTGAAGAGGGTGAACctccaaagaaaaagaaaaag
aagacgaagaagaagaaaaaaccaaaggaacccaaacctcaaacaacgca
aaagttcaaaaaatctTCAAGTTGGGGACGTGCTAGACGGCGTGGTGTCG
GAAATTTTTACACCGATACTAGTAAAGATGCCAATCGATTGTTATTGTTG
ATGACAAAGTACAAACAACGTCATAATTGGAACCATGTTCAAACTTTGGG
TTATTGTCATCCAAAAATGACGGGAGACGAGGAACAAGCTAAAAACATCG
TCCTCCAGTATTGCACACGTGGCAAAGAAAAGTTGGACAAATATCTGGTC
AAGaaaaaaaTCGATGGGGTAACCATATCTCATTcctttctattttattt
ttttttaatttgtaagaAGAGATATGATACTTTCGTCACTGTCTTTGTAG
TGAGAATTTATCTCGAATCTGTTCAAATGACACCACTTACTTTATtaatc
tcctaccatttgcttacatgGCATTTTTAATCTCGCGTCGTGCGAGcaca
aattttgataatttcttttgtttgttaTACTTTGTCGGCATAGAAgcttc
ttattaaaaaagaagatcCTTATTATTTCCACACACTCCCTGGAGCTGGT
AATCGAAAAAGGTTGAATCCAAGTTTAGTaaatatcatgaaatttttcac
attgATAACAAggttttcttaatttttggacTTTCTTTCCAGAATCAACC
AATGGATCCAATCACATCTCAAATATTACAACACATAAAAGTTCTTGAGG
AAGTCAAGAACCTGAAACCGGATGTCCCGGCCGATGTGGAGAGATTGTTG
CAATTGTTGCATCAATACGGTATTCGGGAGGTGCCACAAGAATTTGATGT
GGACGCTGCAGGTCAGATGGTACAAGTGGAAAACACTCAAcgtaaaaaat
gttcttttcaactgaccagggagcatttACCGAATGGCTTCCAAAAATTG
AAGGAGGTAATAGTTGATCAATTAAACGAAACTTAAAACCGCTAATATAC
GGTTTTTTCAATCCCGATCAGCCCGATCAGATTTTCTATTGATCGAAAGT
TAGTCCTTGAAAGCTTGACTAAAAGCTCTTTTAATCGTAATTAAATACTT
AAATGGTTCCAATTTCACTCTACTCATGAATACCAATTTTTCTCCCTTAA
AATTTTTAGGTTTGGGTGGCTCTACTTCAAGACATGCCCATGACAGCCTT
GATCAGGAATCTCGGCAAAATGACTAGCCTTGGGCTCTTTGATGATCCAG
CAAACAGAGAAATCGTCAAGAAGGTTTTAGGGGATGGCTCTATTTTGAAC
AAAGCAAGAATTCACCCAGTCAAGGTTTGCTATTTATTTAGAGTGGCGGC
CAAGGCGCATAAACCAGGGGCTCCCTGCTTCTGTCGATGTTCCGATATTG
AATAGGCTTTTTTCGAGCCCTTTTAGTTTTGGCGCACGTTTTGTTCTATA
CGACAATAAAAGCCGCGTGTAAATTTATGGGAATAAGGTATATCTATTTG
CTTACTGGTGATATTTAACGTTGAATTTCCACggtcttaaggccggtctc
cacttgcgcgtgcTGCGATCGCATTTTTTGGCTTCAGTGCTTTTTGCTTg
gataaaagattacgtcataaaaatgtagcgcacgctcgaaaaaaaagttg
aacacatttcaacttttttcaaccgttaacgtcagatcgcgccaatggag
ttgcttcatttttcttttgaccaatagcgtggaggCTTCGcccgaaaaag
tgcgatcgaagcgcgcgcaagtggagaccggcctttacacTGCACCTTAC
ATGAATGATCAAATACCAACTATATATCCATGAGGGGAAAAGTAGAAAAC
TGTTTCTTACTTGATGAATTTGTAAGTGATGCACCGTGATTGAGCCTGTA
AGTAATGCACTCTGATTGAACCTGTAAGTAATGCACCCAGATTGAACCTT
GTTTCAGATTCTGTTAGCATCAAAGATGTATGAGCAAGGCCATGGTGATC
AAGGCCAAAGCCATCAACCacaacaagaatatccaacaatgagtctttct
caacaactacgacaacaacgacaacgacaacaacagccacaacaaccaca
acaacgagtaccaaccaaagaaccaCTTACTTGGATACCAAACGCTGAAA
TCTCCAAAGCTCTCAATGATGCTTTCTACTTAAGTTTCAGGGTAAGCTCT
ACTTTAGAGATGCAAGCATGGTTAACATAGTCAATCATTCTGGTATAGCG
AATTCCTATGGCTCATTTTGAACTTTTATATACTTGCTAAAATTGATTAG
TCTTCTAGAGAATCTCTTTTAATATTTCCATAGCAACCCGGCAAGAATTC
TTCCTTCCGTACGGACAAAAAGTTCATGTTAAATCTGGATGTTAGTGGCT
CTATGGATTGGCGTAACTGTGTAGGGTGTGATTTCCTGACGCCCGCTGCC
GCCTCTTTCGCCCTGGCCATGATTACGATGAAAGTTGAGCCACATTGTAG
CGTGTTCGCTTTCGGGCGCACGCTTCAAAATATCGATCATTTATTGAAGA
GGGATATGACCATCCGTGAAGCCATTCAATTGGGACGCTCTGTAAGTCGA
CTTCACTATCAAGAAATCTCGTTTTGAATTATTctcatttctttatttct
tcGAACTTGTGTCTTACCTAAATCAGAATATACATCAttctcaaaaagtc
aaaaatgtctacggttgactctcgctaattccgaattatatttgaatctt
tctagaGTTTAAACTAATTCCCAGTCTCCATCAAAGTAGAAGCCTCTTTA
TttcgaatatttctgtaattcgagcaAATCAGACTTCCCTTTCGACTTTG
AATGAGCGAgactaaaatatatttaaaaatcgaCTTCAATGTCAATAGtt
taattccaaaattttctgtGCTTCTTTTATCAGTTATGTCATCATGCCTC
ATTAAACTTAACTTAGGACATCCGTATATCTTTCAGATCAACTTTGGTGC
AACAGACTGTGCTCTACCAATGGTACACGCCACGCAGAACAGGCTGGATG
TGGACGTTTTCATTGTTTACACTGACTCCGAAACTTGGGTTGGAAAAGTT
CATCCTTCCGAAGCTTTGAAGAATTATCGTCTAAAGATGAACAAACCGGA
TGCCAAACTCATTGTCATGGCAATGCAGGTTTGTCTGTTCTCCATTTCAC
GGCCTGTAATGCTGGAATATAtgcagtctgttcctctaaagaatcctgca
ttgtaacacggatgcttaatttgtcgttctttaaaaacCATAtatagtta
attcccgtgataaacaaagaagAATGAATCTGTAGGGTTGGTAcaagtca
ctttcggtcggagctgtggacggcgaaatatgtcgttttttatgaaattt
gtcgttctttttgtctatttttagtaatgcaggattctttagataaaccc
cctcgtCATGATATTATGATATCTCGTTATAAAAAGTGTTGGCATCAATT
CATTTCATTCGATTTCAATCCtgtaaaacctttaaaacacaCGGTGAATA
GGTCATCAACTTCTAGTTATTAGAATTCTGTAGATAAATCattctttttc
attgtatttgaACTTTTCGCACACTTGGGATTGTTGTGGTGCATATAAAG
ACCTCTTTACAGGTTTTGTACGGGATTGTTGTGATGAATATAAAGACCTT
TTTTCTTCTCTCCATTTTTCAAGGTTAATGATTTCACGATCGCCGATCCA
CTCGATCGCGGTATGTTTGACGTTTGTGGATTCGATTCTAACGTACCTGA
CATGATCTGCGAGATCGCCAGAGGAAATATGTCTTGA Coding sequence (CDS) from alignment at sc0000089_pilon:524908..529494+ >XLOC_044129 ID=XLOC_044129|Name=XLOC_044129|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4590bp|location=Sequence derived from alignment at sc0000089_pilon:524908..529494+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACCCATTCAAACAACTTGCCCTTTTGCAGGCTAAAATGGCCGGCAT
GAGTAGGGCCCAGATTGAGGAAGCCATCCGAAACATGACCCTGGGAATAA
ACCCAACAGAACAAGAGCCAGACCTTACTACACCACAAAATCAACCTTTG
CAAGGACAGTCACAAAACGCTGCAGGTGGTTTTTCCTATACTGTTGATAA
TATAACCAGACTGAAAAGATATCTGATATTAGGTTCAGATAAAGCAAAAT
ACAAGGGTGGCTCTCAAgcagaaaatattcaaaatattccaGTTGTTGAA
GAACTTTTAAAGGAGGGTAAAGGAAAGGAAGTGATTGATTTGATCGTTCA
GTTTGCTCGTGAAGCACGTATCTCAAAAGAGGAGAACATTTTGATGGTAT
TACGTGATTGTATGATGTATCAGGGAGATGCCATGTATGAAGATAGGACC
ATACAACGAGCTGCTTATGACAGTATTGTCAAAATCTGTAATATCCCAAC
CAAACTTTTCCGATTGATGGAGCTTTGTGAACCATGTTATCAAAATAATT
GGAAGCCTTCAACCAAGCCAGTCAGTAAGACGCAACTACGGAAGAAAGCA
AAGCAAGAGGCAATACAAGCAGCTCAACAGCAGAACCCAGGGCCTTCCAC
CTCCACTGAAATCCCGGCCGCTCAACCAACGTCAGCAAAAGTGCCAGTTG
AAACATGTGAAATTGTTGAAGAGGGTGAACctccaaagaaaaagaaaaag
aagacgaagaagaagaaaaaaccaaaggaacccaaacctcaaacaacgca
aaagttcaaaaaatctTCAAGTTGGGGACGTGCTAGACGGCGTGGTGTCG
GAAATTTTTACACCGATACTAGTAAAGATGCCAATCGATTGTTATTGTTG
ATGACAAAGTACAAACAACGTCATAATTGGAACCATGTTCAAACTTTGGG
TTATTGTCATCCAAAAATGACGGGAGACGAGGAACAAGCTAAAAACATCG
TCCTCCAGTATTGCACACGTGGCAAAGAAAAGTTGGACAAATATCTGGTC
AAGaaaaaaaTCGATGGGATGGACCCATTCAAACAACTTGCCCTTTTGCA
GGCTAAAATGGCCGGCATGAGTAGGGCCCAGATTGAGGAAGCCATCCGAA
ACATGACCCTGGGAATAAACCCAACAGAACAAGAGCCAGACCTTACTACA
CCACAAAATCAACCTTTGCAAGGACAGTCACAAAACGCTGCAGGTGGTTT
TTCCTATACTGTTGATAATATAACCAGACTGAAAAGATATCTGATATTAG
GTTCAGATAAAGCAAAATACAAGGGTGGCTCTCAAgcagaaaatattcaa
aatattccaGTTGTTGAAGAACTTTTAAAGGAGGGTAAAGGAAAGGAAGT
GATTGATTTGATCGTTCAGTTTGCTCGTGAAGCACGTATCTCAAAAGAGG
AGAACATTTTGATGGTATTACGTGATTGTATGATGTATCAGGGAGATGCC
ATGTATGAAGATAGGACCATACAACGAGCTGCTTATGACAGTATTGTCAA
AATCTGTAATATCCCAACCAAACTTTTCCGATTGATGGAGCTTTGTGAAC
CATGTTATCAAAATAATTGGAAGCCTTCAACCAAGCCAGTCAGTAAGACG
CAACTACGGAAGAAAGCAAAGCAAGAGGCAATACAAGCAGCTCAACAGCA
GAACCCAGGGCCTTCCACCTCCACTGAAATCCCGGCCGCTCAACCAACGT
CAGCAAAAGTGCCAGTTGAAACATGTGAAATTGTTGAAGAGGGTGAACct
ccaaagaaaaagaaaaagaagacgaagaagaagaaaaaaccaaaggaacc
caaacctcaaacaacgcaaaagttcaaaaaatctTCAAGTTGGGGACGTG
CTAGACGGCGTGGTGTCGGAAATTTTTACACCGATACTAGTAAAGATGCC
AATCGATTGTTATTGTTGATGACAAAGTACAAACAACGTCATAATTGGAA
CCATGTTCAAACTTTGGGTTATTGTCATCCAAAAATGACGGGAGACGAGG
AACAAGCTAAAAACATCGTCCTCCAGTATTGCACACGTGGCAAAGAAAAG
TTGGACAAATATCTGGTCAAGaaaaaaaTCGATGGGAATCAACCAATGGA
TCCAATCACATCTCAAATATTACAACACATAAAAGTTCTTGAGGAAGTCA
AGAACCTGAAACCGGATGTCCCGGCCGATGTGGAGAGATTGTTGCAATTG
TTGCATCAATACGGTATTCGGGAGGTGCCACAAGAATTTGATGTGGACGC
TGCAGGTCAGATGGTACAAGTGGAAAACACTCAAcgtaaaaaatgttctt
ttcaactgaccagggagcatttACCGAATGGCTTCCAAAAATTGAAGGAG
AATCAACCAATGGATCCAATCACATCTCAAATATTACAACACATAAAAGT
TCTTGAGGAAGTCAAGAACCTGAAACCGGATGTCCCGGCCGATGTGGAGA
GATTGTTGCAATTGTTGCATCAATACGGTATTCGGGAGGTGCCACAAGAA
TTTGATGTGGACGCTGCAGGTCAGATGGTACAAGTGGAAAACACTCAAcg
taaaaaatgttcttttcaactgaccagggagcatttACCGAATGGCTTCC
AAAAATTGAAGGAGGTTTGGGTGGCTCTACTTCAAGACATGCCCATGACA
GCCTTGATCAGGAATCTCGGCAAAATGACTAGCCTTGGGCTCTTTGATGA
TCCAGCAAACAGAGAAATCGTCAAGAAGGTTTTAGGGGATGGCTCTATTT
TGAACAAAGCAAGAATTCACCCAGTCAAGGTTTGGGTGGCTCTACTTCAA
GACATGCCCATGACAGCCTTGATCAGGAATCTCGGCAAAATGACTAGCCT
TGGGCTCTTTGATGATCCAGCAAACAGAGAAATCGTCAAGAAGGTTTTAG
GGGATGGCTCTATTTTGAACAAAGCAAGAATTCACCCAGTCAAGATTCTG
TTAGCATCAAAGATGTATGAGCAAGGCCATGGTGATCAAGGCCAAAGCCA
TCAACCacaacaagaatatccaacaatgagtctttctcaacaactacgac
aacaacgacaacgacaacaacagccacaacaaccacaacaacgagtacca
accaaagaaccaCTTACTTGGATACCAAACGCTGAAATCTCCAAAGCTCT
CAATGATGCTTTCTACTTAAGTTTCAGGATTCTGTTAGCATCAAAGATGT
ATGAGCAAGGCCATGGTGATCAAGGCCAAAGCCATCAACCacaacaagaa
tatccaacaatgagtctttctcaacaactacgacaacaacgacaacgaca
acaacagccacaacaaccacaacaacgagtaccaaccaaagaaccaCTTA
CTTGGATACCAAACGCTGAAATCTCCAAAGCTCTCAATGATGCTTTCTAC
TTAAGTTTCAGGCAACCCGGCAAGAATTCTTCCTTCCGTACGGACAAAAA
GTTCATGTTAAATCTGGATGTTAGTGGCTCTATGGATTGGCGTAACTGTG
TAGGGTGTGATTTCCTGACGCCCGCTGCCGCCTCTTTCGCCCTGGCCATG
ATTACGATGAAAGTTGAGCCACATTGTAGCGTGTTCGCTTTCGGGCGCAC
GCTTCAAAATATCGATCATTTATTGAAGAGGGATATGACCATCCGTGAAG
CCATTCAATTGGGACGCTCTCAACCCGGCAAGAATTCTTCCTTCCGTACG
GACAAAAAGTTCATGTTAAATCTGGATGTTAGTGGCTCTATGGATTGGCG
TAACTGTGTAGGGTGTGATTTCCTGACGCCCGCTGCCGCCTCTTTCGCCC
TGGCCATGATTACGATGAAAGTTGAGCCACATTGTAGCGTGTTCGCTTTC
GGGCGCACGCTTCAAAATATCGATCATTTATTGAAGAGGGATATGACCAT
CCGTGAAGCCATTCAATTGGGACGCTCTATCAACTTTGGTGCAACAGACT
GTGCTCTACCAATGGTACACGCCACGCAGAACAGGCTGGATGTGGACGTT
TTCATTGTTTACACTGACTCCGAAACTTGGGTTGGAAAAGTTCATCCTTC
CGAAGCTTTGAAGAATTATCGTCTAAAGATGAACAAACCGGATGCCAAAC
TCATTGTCATGGCAATGCAGATCAACTTTGGTGCAACAGACTGTGCTCTA
CCAATGGTACACGCCACGCAGAACAGGCTGGATGTGGACGTTTTCATTGT
TTACACTGACTCCGAAACTTGGGTTGGAAAAGTTCATCCTTCCGAAGCTT
TGAAGAATTATCGTCTAAAGATGAACAAACCGGATGCCAAACTCATTGTC
ATGGCAATGCAGGTTAATGATTTCACGATCGCCGATCCACTCGATCGCGG
TATGTTTGACGTTTGTGGATTCGATTCTAACGTACCTGACATGATCTGCG
AGATCGCCAGAGGAAATATGTCTTGAGTTAATGATTTCACGATCGCCGAT
CCACTCGATCGCGGTATGTTTGACGTTTGTGGATTCGATTCTAACGTACC
TGACATGATCTGCGAGATCGCCAGAGGAAATATGTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:524908..529494 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2182-2295:4474 |
| Aaloc | 1990-2181:3737 |
| Aaloc | 1732-1989:3084 |
| Aaloc | 1498-1731:2708 |
| Aaloc | 1333-1497:1910 |
| Aaloc | 1069-1332:1443 |
| Aaloc | 1-1068:1 |
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