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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:647583..652035+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044123 ID=XLOC_044123|Name=XLOC_044123|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4453bp|location=Sequence derived from alignment at sc0000089_pilon:647583..652035+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTGAAGCTACTTGTTGTCtttttttggatgctgaaaatttcaaa
ctgcaAAGAATTAAAAGAAAGTAAGATATTCTTCTCTTTGTGCTACttat
gaaaatttgatttgttaaaaaattatccaaaaatagATCTTTTGTAAAAC
ATAAGTGTCACATAGTCAATATTTGAAAGACTTCGATATTGATTTCAAGG
TCAAGTTATTTTCCTGTAGTGACCAAAAGGGTCTCTAATCTAAGAGCGAG
AAGACGCCGATCCTAGACTATCATCCATGCAAACTTTCGGGATATCTTTC
AGTATCTGATGTTTTAATTCATTTTGACTGAAAAATGTCGTTATAAAATC
CGCCTTCTAGAGTAAAAACCGACAATACGGTTAGTACCAAAGGAGGGAGT
CGAGAAGAAAAAACTTCGGGGAAGAATACAGGAAGAAATTCTTTCAGAAG
CTTTCCCCCATCTGTTATGATGATGAGTTTTTCtctttatgaaaaattgg
gGAAAGATTTTATCAGGGGAGTTTGGTGATGACAAAAATTCAATAATAAA
ATACTAACTTTAAATGAATTTTCTCCAGATGGCCTCGTCCGCctgttgtt
ttcatttttatgttatTTCGAATGTcaaattacattttttaaatctgtgt
tcttaaaaaatatcgAACATCTCtttttttCGCTTGTCCTCATAGGCTGC
aggcatcccctctgatatgttttgatatagaggATGCTAATCGTGTACGT
GTATAAAACTtctgtcaaattttcaattttcttaaaaaggttcAACTAAC
CGCTAATTTCtgaaactcaaaaacacaaaacgggggtaactctcggacgg
gagtTTTATACACGATGTGAATCCCTTATATCAAAACAGATCAAAGGGGA
TTTGTTTAGGCTCTTTCAGCCCTCCTTGATGCTGAAAATGGTAAAACTCT
TCAACCGTATACTTTTATAACGAAACATTGAAAGGTTGAGTATCGAActg
aaaagaagaacttaaaaatgATAAAGGACAGGACCTCAGGATTCAAAAGC
TCATAAGCCAAAGAAGCCACTGACCccttccaaaatcgaaatattcaatg
aagtATAGTGGAAGTACTAAAATcacaattctcgcccgaacctTTTAACC
CGACACATATTATCCTTTATAGAAAGATAAAGCAGGGGTTAcatcaattt
tgattcatcTTACTTTAGAAAACCCACTGCACAATGCGACACACTACTGG
AACATGAACAAATATAACAAATGGGAGGCCAAAGACTCCATCACCCAACT
TCACCTCAAGTTCAAGAATCGTGGCGTGAGCGTGGAGAAACAGAAACAGC
TTGGAAACGTTCTGCAGTTAGGTGAGGGATATGCAATATTTGATGGGTGA
CTCCTTAAAGCTATTTAAAATTTAGCTCCCAAcatctaaaaatctaaaat
tcctGTGTTTAGATATTGTTCTATACTGTATATATAAAGAACATTTGCTT
AAGATCACATACTTTAACATCAGGTCTCGAACAATATTATGACTTATTTT
TTAAAGTGTTCTTCAAAGTCAATAtttgaatgaaatttaaaaCACCATAC
ATTTTACAAGAACTTGAGAAAAACATAAACCtctcaaaaatattgaattt
aatCTCGACAGATGGCCGTTAAAGAGAACATCGTGTGAATTAAATAAACG
CCGGGGTTTCTTCATATTTTATAACCATTGACTATAACATGTCTACTTCT
GCGCATGTGCGCGACATAATGACGTAAGCATTTACCAATATTCCAAAAAG
CTTTCTGACGTCACACATCAGAGATTTCTTTAGGTTGAGAAGCCTTTCAG
ACGCGCAAACGGCTGAAGGTTTGCGGAAGTGTGAACCAGTCTTGAATCAC
GTCTGTTCTCAAAAGAGGCGGGTCTAGCCATTGAGAGATTCTTTAACTAT
ATAGAAAAGACAGAAAAGTAGGTTTTATGGGAGATAAAGAATTGAAAACA
TATATTTCTTGAACAATTTCGGTTCAAACTTTGCCAAAAATCACATTAAA
CTTAACTTATACGACAATTTTATCATTTAGATGGACGAATAAGCTGGTTG
GAGATTCCGCACCTCCAAGACAAATGCTTAACTTCGGTATCGTGCACTCG
GGGCATGACTTTTAGTTTTTGGATGAAATATAAGAGTGGTGATTACATAA
TGTCTGCCGGAAAGATTGCCGGTAAGTAAACTTCATAAAATGACTGTCAA
AAACTCTCCAATTGATCGCCTCGGTGAATATAAAGTTGAAAGTTCAACTT
AAATTCAAAACCAGGAACTGTTGAACAACCCGATGCTTATTTAAATCTAA
TGAAAGAAttgttttttccaaaacacGCTTTTATCACACAGTCTAATGAG
TCAATGAGATAGGGGTCTGCAAAAGAGTTTTCCTTGTGGCAAACCTTTGA
TGACAGAAttgttttacattttctctccaTTTTCAGTCAGTGAAGAATTC
ATGAGTGGATTCCGGTTGCAGAGAGATCCGTTGACCAATTTCTTCATTTT
GGAGATCATCAGTGAGGAGTCACAGAGAATATGGAAGATCTACTTGAAGG
AATTGCCCAAATCATGGTTCCATTTCCTTTTCACGTGGCAAAGCAACGAG
GGCGCTAGATTGTATATCGACGGAGATTTGAAGCTAACGAGAAGGCTTTC
TGAGCCTGCTCCAAACAATAATGTGGAGCTGTCAAACTCTTTGGGTGAGA
GAGACGCACATAAAGTAACTTTTGGGCAGATTGGTTCATTACGTGAAATG
GATGATCGAGGCGAATTTGAAATCTCTCACATAGCAATATGGAAGAAAGT
TTTAACAGATGAAGATATcataaaagtttacaaaaatacGGTGGCAACGG
ATGATGACGTCACCTTTTGTTGCAATGGAAAGAAAAACGCCCTTGGTACA
TTGaaattgctttttattttgaatctcAAACCACTCAACACTCTACTGAT
ATTCACAATTATTTCATTCAAAAGTGCACATTTTGGGGTATACCAATTTT
AATAAACTATTCCTTGTTCTGATGTTGTCATCAGTCGTTTAAACTaatat
ttatcatatttttcaggCGGAGCATGCGCAAAATGGGACAGCTATTCTTG
CATTTGCACAGAACTGAAGAAAGAAGATATTTGTCGGAAACCCATCCTTA
CACCAGCAAAGTTCACAGAAACCAAAAAAGGTAATGTTTGCAAGAAAAGT
TCATTTACTATTGTTAATTACTTGCAGAAGTCAAAGTCAGCTATCGGTCA
GCTCACCCCTTATACGAGAAAACAAATCTATAATCGGCAATCAACCTGat
aactttttctttcatttgaaaatacAGAATGCGTCGACTTAAACCCACAC
TGCGATAAACTAGTTAACAATCAAGTGAGAGGATATTGTGAAAGTTTTGT
TGATTCAGCGATGACTGACTGTAAATATTCCTGCAGGTGTAAACCAGGTA
AGAAATTAGCAAAACGTTTTTTACTTTGCCAGGTTTCTAGACTAAGAACa
aattgcaacttttttctaaatcaAGGACCGGAGTTTTTTAGTAGCATTTA
GGTCTATTCGGTCAATTTAgacagtaaaataaaaaacatgtgaTCTTCCC
TTCCTCAATTTTAATTTGTTGAAATGTTTAGTAGTACAACCGCGAAATct
ttaatttgagaaaattaaGCCGCGCTTTGAAAATTCCTGATaaataaatg
ttctttcatgAAGAACGGGCCGATTAGAAAGAAAGTTTTGTTACGAATTC
ATTCTGGTGTGTTTCGAATCGGATGAAGTTTCAAGGAATGTCTGAAAGTT
TCAGACTTCTTTTTCGATTTCAAAGAATTCTTGTACCATAGCAGCCTGGA
TATcctttttatttctgacgtttCTATTTTACTAGCAGCTTCCTAAAGTG
ATTTGCATTCCATTATCATTCAAATTTTGTGCAAAAATTTGTCGACCAAG
GGCTTATAAACATCTAGGTAGACTAAGCTATAATTAGCAGAAACAAATTG
ATAGCTTGAATATCCAGGCTACAGCAAAGCATGTAACtgaaaatcaacct
ttttaaAACTAATACCAAATAGTGGTATTTCATTGGCGTCAAGATCACCA
AATCATCTCTTCTCATTCTTTCAGTGACGCAGATGATGATGAGTCGTCAA
CCAAAACAACATTTCACCCAAGAAGCTCTCATCTTTGCATTGTTGGGGTG
TATCGGGGGCCTTATTCTTTTGTTCGGCATCATGTTTTACTTTTGGAAAG
TCTATAGAACGTGAgtatttttgttacatttttctttctcaaTTCGAAAC
TAAACGGAATCTTTAAAGGGAGGAAAATTTCACGAAGCTTCTTCGTCTTC
TTTCCAGCCAATGTTACCCGAGTGAGACGAAAGGTGAAAGATTCTTGTCT
TAA Coding sequence (CDS) from alignment at sc0000089_pilon:647583..652035+ >XLOC_044123 ID=XLOC_044123|Name=XLOC_044123|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2478bp|location=Sequence derived from alignment at sc0000089_pilon:647583..652035+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTGAAGCTACTTGTTGTCtttttttggatgctgaaaatttcaaa
ctgcaAAGAATTAAAAGAAAATGAAGCTGAAGCTACTTGTTGTCtttttt
tggatgctgaaaatttcaaactgcaAAGAATTAAAAGAAAAAAACCCACT
GCACAATGCGACACACTACTGGAACATGAACAAATATAACAAATGGGAGG
CCAAAGACTCCATCACCCAACTTCACCTCAAGTTCAAGAATCGTGGCGTG
AGCGTGGAGAAACAGAAACAGCTTGGAAACGTTCTGCAGTTAGAAAACCC
ACTGCACAATGCGACACACTACTGGAACATGAACAAATATAACAAATGGG
AGGCCAAAGACTCCATCACCCAACTTCACCTCAAGTTCAAGAATCGTGGC
GTGAGCGTGGAGAAACAGAAACAGCTTGGAAACGTTCTGCAGTTAGATGG
ACGAATAAGCTGGTTGGAGATTCCGCACCTCCAAGACAAATGCTTAACTT
CGGTATCGTGCACTCGGGGCATGACTTTTAGTTTTTGGATGAAATATAAG
AGTGGTGATTACATAATGTCTGCCGGAAAGATTGCCGATGGACGAATAAG
CTGGTTGGAGATTCCGCACCTCCAAGACAAATGCTTAACTTCGGTATCGT
GCACTCGGGGCATGACTTTTAGTTTTTGGATGAAATATAAGAGTGGTGAT
TACATAATGTCTGCCGGAAAGATTGCCGTCAGTGAAGAATTCATGAGTGG
ATTCCGGTTGCAGAGAGATCCGTTGACCAATTTCTTCATTTTGGAGATCA
TCAGTGAGGAGTCACAGAGAATATGGAAGATCTACTTGAAGGAATTGCCC
AAATCATGGTTCCATTTCCTTTTCACGTGGCAAAGCAACGAGGGCGCTAG
ATTGTATATCGACGGAGATTTGAAGCTAACGAGAAGGCTTTCTGAGCCTG
CTCCAAACAATAATGTGGAGCTGTCAAACTCTTTGGGTGAGAGAGACGCA
CATAAAGTAACTTTTGGGCAGATTGGTTCATTACGTGAAATGGATGATCG
AGGCGAATTTGAAATCTCTCACATAGCAATATGGAAGAAAGTTTTAACAG
ATGAAGATATcataaaagtttacaaaaatacGGTGGCAACGGATGATGAC
GTCACCTTTTGTTGCAATGGAAAGAAAAACGCCCTTGTCAGTGAAGAATT
CATGAGTGGATTCCGGTTGCAGAGAGATCCGTTGACCAATTTCTTCATTT
TGGAGATCATCAGTGAGGAGTCACAGAGAATATGGAAGATCTACTTGAAG
GAATTGCCCAAATCATGGTTCCATTTCCTTTTCACGTGGCAAAGCAACGA
GGGCGCTAGATTGTATATCGACGGAGATTTGAAGCTAACGAGAAGGCTTT
CTGAGCCTGCTCCAAACAATAATGTGGAGCTGTCAAACTCTTTGGGTGAG
AGAGACGCACATAAAGTAACTTTTGGGCAGATTGGTTCATTACGTGAAAT
GGATGATCGAGGCGAATTTGAAATCTCTCACATAGCAATATGGAAGAAAG
TTTTAACAGATGAAGATATcataaaagtttacaaaaatacGGTGGCAACG
GATGATGACGTCACCTTTTGTTGCAATGGAAAGAAAAACGCCCTTGgCGG
AGCATGCGCAAAATGGGACAGCTATTCTTGCATTTGCACAGAACTGAAGA
AAGAAGATATTTGTCGGAAACCCATCCTTACACCAGCAAAGTTCACAGAA
ACCAAAAAAGgCGGAGCATGCGCAAAATGGGACAGCTATTCTTGCATTTG
CACAGAACTGAAGAAAGAAGATATTTGTCGGAAACCCATCCTTACACCAG
CAAAGTTCACAGAAACCAAAAAAGAATGCGTCGACTTAAACCCACACTGC
GATAAACTAGTTAACAATCAAGTGAGAGGATATTGTGAAAGTTTTGTTGA
TTCAGCGATGACTGACTGTAAATATTCCTGCAGGTGTAAACCAGAATGCG
TCGACTTAAACCCACACTGCGATAAACTAGTTAACAATCAAGTGAGAGGA
TATTGTGAAAGTTTTGTTGATTCAGCGATGACTGACTGTAAATATTCCTG
CAGGTGTAAACCAGTGACGCAGATGATGATGAGTCGTCAACCAAAACAAC
ATTTCACCCAAGAAGCTCTCATCTTTGCATTGTTGGGGTGTATCGGGGGC
CTTATTCTTTTGTTCGGCATCATGTTTTACTTTTGGAAAGTCTATAGAAC
TGACGCAGATGATGATGAGTCGTCAACCAAAACAACATTTCACCCAAGAA
GCTCTCATCTTTGCATTGTTGGGGTGTATCGGGGGCCTTATTCTTTTGTT
CGGCATCATGTTTTACTTTTGGAAAGTCTATAGAACCCAATGTTACCCGA
GTGAGACGAAAGGTGAAAGATTCTTGTCTTAACCAATGTTACCCGAGTGA
GACGAAAGGTGAAAGATTCTTGTCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:647583..652035 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1195-1239:4409 |
| Aaloc | 1060-1191:4177 |
| Aaloc | 940-1056:3380 |
| Aaloc | 826-936:3119 |
| Aaloc | 367-822:2489 |
| Aaloc | 226-363:2083 |
| Aaloc | 73-222:1221 |
| Aaloc | 1-69:1 |
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