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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:171253..173888- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044108 ID=XLOC_044108|Name=XLOC_044108|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2636bp|location=Sequence derived from alignment at sc0000101_pilon:171253..173888- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCCTGGCAGTTGCTTATATCCTGTTGTCCATGGCAGCAACCATTAA
CACCCAACAACCTAACGATGATTCGAACCCCAACCTCATGGCAGCCATGA
CAGGTTATAATATCTTAAAAGGAAACCCATTCTCAATGAACGCTTTACAT
GACCCAGGATTCCTGGCATCTTATATCTTTAACCCATACACCAGTAGTGG
CGGACCACCAGGAATGGGCGATGGTTCGAGGCAGTTACACCCGGGCGTCA
CAGTGAGAAACATTCGACAATGCGATTTGAGTTTGACCACTGATACAATC
ACCACCATGAAAGAATATCAACGACAGGTGAAATTCATATATTTTTTAAT
ATGATACTCCGGTAGGGGGAGTCAGGCAAATTAACCGAGGATGTTTTTCA
AGATTGCAGAAATACACTGAAAGCGTGGACTTTTTCATAAAGGGCGGAAG
TTTCTAATTTTACCGAAAATTCAGATTTTTTTAAGGGTGCGATTCTAGAA
GCCGTTTTTTGCCGCACACACCGTCAGTTGGTAAACCCACTGCCTCTCCC
CCCGGGGTTGTCTGTACACAAACCCAGTATCTACAGCTAATTTCAAATTT
CATTGCCGTAGATGGTCTGTTGTCATCGTCTTTTCTCATTTGAGATTTTT
CAAACCGACCGCTGCGATGGAGTATTGGTGAGAGAGGGGCTATTTATAAA
TCATACTTCATCGCAGAGGTCTCCGTACGGGAATTTCTTTATCAAACAGG
CAATGCGCACAGAGTGTATTACGAAGCGATAAAACATGTGATGCACTCTG
GTAAAGAGTACCCCCGGGTGATACTATAAACAATAAACCAGTACTTTTTC
AAGGTCCATTTCCAAACTGGAATCCAACAAATTCAGCAATCTTCTTATAC
TTATACAGTAAGAACCAAGTATCAGTTCCTTAATCACCAAATTACAAACT
ACGGTTTCTTTCCTTTCCGAAAATGAGGCGAGAAATTTAATTCAATTGAC
TTTATTTTGTTTCGGTAAAAGGAACAAGAAACATAGGAACCTTTTCCTTA
CTTTTGATCATAAGTTTTAAATCAAAATTCTTTGCTTCTTCTTAATTAAG
GTTACCACGGAAACATCAGCTGGCATGGAGTTTGCCAGTAACGTTGAAGC
AGATGTCCAAGCATCAGTGAATGGGATTGGTATCGACACCACAGTTCCTC
CACTGGTCAAAAGTTCCTTCTCCGCAAGCAACAGTTTCAGAGAAAGTGAA
AAATTCTTCTCACAAAACAAAGGTGTTGTTACACTCAATGATGCAACTTG
TACCTCCTATACGGCCGTCATCTCAGCATACAACCCACCACCTTTCTCCG
ATAACTTCTTGAAAGCCCTTGATGTTCTTCATAGAACAAGTTTTAAAACT
GAGGCAGAAAAAGATCGTGAATTTTATCGTTTTATTGACAACTTTGGTAC
ACATTTCCTGTCACATGCGACAATGGGTGCACGGTTAGCCATCACACGAA
AGTACACTTCGGAGGAATATTCAAACTCAAAAGACGAAGCAATAAAGGAC
TGCAATGTTCAACAACTTTCAGTATTTTTCGGACAACAAGTTGACAGCAA
ATTGGATCACTGCAAAGCTGTTGATAAATCATCAAGCTCAAAGATCGAAA
ATATCTACGAGCGTGAATTCATCTCCAGCTACGGTAGTAAACCAGCGAAA
GATCTAGTTGATTGGTCAACGCAAGACTTCCCAAACCCCTTACCAGTCCG
TATGACATTAAGACCGATCCTTAATCTCTTCGGTACAACCTATATGAAAC
ATCCATCAGTGAAACGCCTTCATATCCAACCAAAAACCATTTTGAAATGG
ATTGCACCACGTTACTATAACTTCTGCAATAAATACAAAAACATCTTGGG
CGTCAAAACCTGCAATGCTGAAGCAGTCAAAGGGTGTGGCTGGAGTGATA
CATGCAACCGTAGGTCACAACACTGTATCAACGACAAGACGAATCCTAAC
GGATACAGATGTTGTGATATCAAGCAGTGTGCTGACCAGCCATGTAAGTA
TGGAACGTGTCACGTCTCAGGCAAATGTTCATACGTCTGCAAATGTAGAT
GGGGCTATACAGGCAAACATTGTGAGCACGAAATCCTTACAGCATCCAGT
CTGGAAATGGGTACTGATATTCTGATCGCAGCTAACCGGTACTTGTCACA
TGACCAAATGGCAAAGAACATTCAATTGTCTTTAATAAAGCACTATGGAA
TCAAATTCACAGTTCTGGTATATGATGATGTTTACGGGTATGGATTACAC
AACGTCCAGGGAACGCAATTTTACAGCAATTTCAGAGAATGGGGACACAA
TGTGGTTGTCGGCTACTCACAAAATGATTTAGAATCAACACCAGAACAAA
TGGCCATGATCAAATGGAGATTATTAGGAGCTGTCTTGAATCAAGGATGT
CATTCGTCAACTATCGTTGAAAAGGTGAAGGATTTGCTGCATAAGTATGA
TATACCTTACAGTATGATCTTTTCAACTCCATGGGGAAATAAATTGCGTG
CATACTCAGATGTGGAATCTACATATTTCTTGAACTACGACTGTGGCGTT
GGAAAGAAAGCCTCAATCGCTGTAATGCTAAGATGA Coding sequence (CDS) from alignment at sc0000101_pilon:171253..173888- >XLOC_044108 ID=XLOC_044108|Name=XLOC_044108|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3726bp|location=Sequence derived from alignment at sc0000101_pilon:171253..173888- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCCTGGCAGTTGCTTATATCCTGTTGTCCATGGCAGCAACCATTAA
CACCCAACAACCTAACGATGATTCGAACCCCAACCTCATGGCAGCCATGA
CAGGTTATAATATCTTAAAAGGAAACCCATTCTCAATGAACGCTTTACAT
GACCCAGGATTCCTGGCATCTTATATCTTTAACCCATACACCAGTAGTGG
CGGACCACCAGGAATGGGCGATGGTTCGAGGCAGTTACACCCGGGCGTCA
CAGTGAGAAACATTCGACAATGCGATTTGAGTTTGACCACTGATACAATC
ACCACCATGAAAGAATATCAACGACAGATGGCCCTGGCAGTTGCTTATAT
CCTGTTGTCCATGGCAGCAACCATTAACACCCAACAACCTAACGATGATT
CGAACCCCAACCTCATGGCAGCCATGACAGGTTATAATATCTTAAAAGGA
AACCCATTCTCAATGAACGCTTTACATGACCCAGGATTCCTGGCATCTTA
TATCTTTAACCCATACACCAGTAGTGGCGGACCACCAGGAATGGGCGATG
GTTCGAGGCAGTTACACCCGGGCGTCACAGTGAGAAACATTCGACAATGC
GATTTGAGTTTGACCACTGATACAATCACCACCATGAAAGAATATCAACG
ACAGGTTACCACGGAAACATCAGCTGGCATGGAGTTTGCCAGTAACGTTG
AAGCAGATGTCCAAGCATCAGTGAATGGGATTGGTATCGACACCACAGTT
CCTCCACTGGTCAAAAGTTCCTTCTCCGCAAGCAACAGTTTCAGAGAAAG
TGAAAAATTCTTCTCACAAAACAAAGGTGTTGTTACACTCAATGATGCAA
CTTGTACCTCCTATACGGCCGTCATCTCAGCATACAACCCACCACCTTTC
TCCGATAACTTCTTGAAAGCCCTTGATGTTCTTCATAGAACAAGTTTTAA
AACTGAGGCAGAAAAAGATCGTGAATTTTATCGTTTTATTGACAACTTTG
GTACACATTTCCTGTCACATGCGACAATGGGTGCACGGTTAGCCATCACA
CGAAAGTACACTTCGGAGGAATATTCAAACTCAAAAGACGAAGCAATAAA
GGACTGCAATGTTCAACAACTTTCAGTATTTTTCGGACAACAAGTTGACA
GCAAATTGGATCACTGCAAAGCTGTTGATAAATCATCAAGCTCAAAGATC
GAAAATATCTACGAGCGTGAATTCATCTCCAGCTACGGTAGTAAACCAGC
GAAAGATCTAGTTGATTGGTCAACGCAAGACTTCCCAAACCCCTTACCAG
TCCGTATGACATTAAGACCGATCCTTAATCTCTTCGGTACAACCTATATG
AAACATCCATCAGTGAAACGCCTTCATATCCAACCAAAAACCATTTTGAA
ATGGATTGCACCACGTTACTATAACTTCTGCAATAAATACAAAAACATCT
TGGGCGTCAAAACCTGCAATGCTGAAGCAGTCAAAGGGTGTGGCTGGAGT
GATACATGCAACCGTAGGTCACAACACTGTATCAACGACAAGACGAATCC
TAACGGATACAGATGTTGTGATATCAAGCAGTGTGCTGACCAGCCATGTA
AGTATGGAACGTGTCACGTCTCAGGCAAATGTTCATACGTCTGCAAATGT
AGATGGGGCTATACAGGCAAACATTGTGAGCACGAAATCCTTACAGCATC
CAGTCTGGAAATGGGTACTGATATTCTGATCGCAGCTAACCGGTACTTGT
CACATGACCAAATGGCAAAGAACATTCAATTGTCTTTAATAAAGCACTAT
GGAATCAAATTCACAGTTCTGGTATATGATGATGTTTACGGGTATGGATT
ACACAACGTCCAGGGAACGCAATTTTACAGCAATTTCAGAGAATGGGGAC
ACAATGTGGTTGTCGGCTACTCACAAAATGATTTAGAATCAACACCAGAA
CAAATGGCCATGATCAAATGGAGATTATTAGGAGCTGTCTTGAATCAAGG
ATGTCATTCGTCAACTATCGTTGAAAAGGTGAAGGATTTGCTGCATAAGT
ATGATATACCTTACAGTATGATCTTTTCAACTCCATGGGGAAATAAATTG
CGTGCATACTCAGATGTGGAATCTACATATTTCTTGAACTACGACTGTGG
CGTTGGAAAGAAAGCCTCAATCGCTGTAATGCTAAGATGAGTTACCACGG
AAACATCAGCTGGCATGGAGTTTGCCAGTAACGTTGAAGCAGATGTCCAA
GCATCAGTGAATGGGATTGGTATCGACACCACAGTTCCTCCACTGGTCAA
AAGTTCCTTCTCCGCAAGCAACAGTTTCAGAGAAAGTGAAAAATTCTTCT
CACAAAACAAAGGTGTTGTTACACTCAATGATGCAACTTGTACCTCCTAT
ACGGCCGTCATCTCAGCATACAACCCACCACCTTTCTCCGATAACTTCTT
GAAAGCCCTTGATGTTCTTCATAGAACAAGTTTTAAAACTGAGGCAGAAA
AAGATCGTGAATTTTATCGTTTTATTGACAACTTTGGTACACATTTCCTG
TCACATGCGACAATGGGTGCACGGTTAGCCATCACACGAAAGTACACTTC
GGAGGAATATTCAAACTCAAAAGACGAAGCAATAAAGGACTGCAATGTTC
AACAACTTTCAGTATTTTTCGGACAACAAGTTGACAGCAAATTGGATCAC
TGCAAAGCTGTTGATAAATCATCAAGCTCAAAGATCGAAAATATCTACGA
GCGTGAATTCATCTCCAGCTACGGTAGTAAACCAGCGAAAGATCTAGTTG
ATTGGTCAACGCAAGACTTCCCAAACCCCTTACCAGTCCGTATGACATTA
AGACCGATCCTTAATCTCTTCGGTACAACCTATATGAAACATCCATCAGT
GAAACGCCTTCATATCCAACCAAAAACCATTTTGAAATGGATTGCACCAC
GTTACTATAACTTCTGCAATAAATACAAAAACATCTTGGGCGTCAAAACC
TGCAATGCTGAAGCAGTCAAAGGGTGTGGCTGGAGTGATACATGCAACCG
TAGGTCACAACACTGTATCAACGACAAGACGAATCCTAACGGATACAGAT
GTTGTGATATCAAGCAGTGTGCTGACCAGCCATGTAAGTATGGAACGTGT
CACGTCTCAGGCAAATGTTCATACGTCTGCAAATGTAGATGGGGCTATAC
AGGCAAACATTGTGAGCACGAAATCCTTACAGCATCCAGTCTGGAAATGG
GTACTGATATTCTGATCGCAGCTAACCGGTACTTGTCACATGACCAAATG
GCAAAGAACATTCAATTGTCTTTAATAAAGCACTATGGAATCAAATTCAC
AGTTCTGGTATATGATGATGTTTACGGGTATGGATTACACAACGTCCAGG
GAACGCAATTTTACAGCAATTTCAGAGAATGGGGACACAATGTGGTTGTC
GGCTACTCACAAAATGATTTAGAATCAACACCAGAACAAATGGCCATGAT
CAAATGGAGATTATTAGGAGCTGTCTTGAATCAAGGATGTCATTCGTCAA
CTATCGTTGAAAAGGTGAAGGATTTGCTGCATAAGTATGATATACCTTAC
AGTATGATCTTTTCAACTCCATGGGGAAATAAATTGCGTGCATACTCAGA
TGTGGAATCTACATATTTCTTGAACTACGACTGTGGCGTTGGAAAGAAAG
CCTCAATCGCTGTAATGCTAAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101_pilon | genome | sc0000101_pilon:171253..173888 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 328-1863:1537 |
| Aaloc | 1-327:2637 |
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