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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:28118..30034- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044101 ID=XLOC_044101|Name=XLOC_044101|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1917bp|location=Sequence derived from alignment at sc0000101_pilon:28118..30034- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATTCATTTTTTTGTAGGTTGTTAATGTTGACTCAAAACCAAAGAT
CCAAGTCGAATACAAAGGTGAAACCAAAAAGTTTTTCCCTGAAGAAATCT
CATCCATGGTTCTCACCAAAATGAAGGAAGTTGCTGAATCTTATTTGGGC
AAAACTATCACTGATGCTGTAATTACCGTCCCTGCTTACTTCAATGATGG
GCAAAGACAAGCTACCAAAGATGCTGGTGTTATCGCTGGTCTCAATGTCC
TTCGTATTATCAACGAGCCTACTGCTGCTGCCATTGCCTACGGTCTTGAC
AAGAAAGTTGGCTCAGAAAAGAATGTCTTGATTTTCGATCTTGGTGGTGG
TACCTTTGATGTATCCATCCTTGCTATTGAAGATGGTATCTTTGAAGTTA
AATCTACCAATGGAAACACTCACTTGGGTGGAGAAGATTTTGACCACTTA
TTAGTCAACCATTGTAAAGGAGCTTTCAAAGCTAAGAATAAGAAGGACAT
TTCAAACAACAAAAGAGCTGTGCGTCGTCTCAGAACAGCTTGTGAAAGAG
CCAAGAGAACTCTCTCTGGTTCATCTCAAGCCAACATTGAAATTGATTCT
TTGTATGAGGGCATTGACTTTTATCACACAATCACCCGTGCTAAATTTGA
GGATCTCTGCAAGCAAGAGTTTTTGAATTGCTTAGACCCTGTTCGACTTT
GTCTGAGGGATTCAGGCTTAGAAAAGGCCCAAATCCATGATGTTGTTTTG
GTTGGTGGATCAACACGTATTCCTAAAATCCAAAAACTTTTGACAGACTT
TTTCAATGGAAAAGAATTGAACAAATCTATCAATCCAGATGAAGCTGTTG
CTTATGGTGCTGCTGTACAAGCTGCAATCTTGAGCGGATCCAAGGATGAA
GCTGTCCAAGACTTACTTTTACTCGATGTTGCTCCATTATCTTTGGGTAT
TGAAACCGCTGGAGGTGTGATGACTGCCCTTATTAAGAGAAATACCACCA
TTCCAACAAAACAGCAACAAACTTTCACAACTTATGCTGATAACCAACCT
GGTGTCTTGATTCAAGTCTTTGAAGGTGAGAGAGCTATGACTAAGGAGAA
CAACCATCTCGGTAAATTCGAACTTTCTGGAATTCCTCCAGCACCTAGAG
GTGTTCCACAAATTGAAGTGACCTTTGACATCGATGCTAACGGTATTTTG
AATGTCACTGCCACCGATAAATCCACTGGCAAAGAAAACAAGATCACTAT
CACCAATGACAAAGGAAGACTCAGCAAAGAAGACATTGAGAAAATGGTTG
CCGATGCTGAGAAATACAAAGCTGAAGATGAAGCGATCAAGGATAAGGTT
CAAGCCAAGAACGGACTCGAAAGCTACTCTTATCAAATGAAAACAACCAT
CGAAGACGAAAAAGTCAAGGACAAGATCAGTGAAGAGGACAAGACTGCCA
TTACCGACAAATGCAAGGAAACCTTGGACTGGCTTGATGCTAATCCAGTA
AGTAATTTCTTCTAGCAACTTCTTTCAAAGCAATCGATTTTAATTGCAAA
ACTGAATCTTGTTTGAAGGATCATGAAAATTATTTTACATTCCCGTTATA
TTGGAAATCTTGTTAGAATCAACGAACAACTTATGGTTTAGCAAAAATAT
TTCATCTTGCTATTACACGACCATAGACCAGACTTTCAAAAATGTCATTT
CTTTTTTTAGGAGGCATCAAAGGAAGAATTTGAGAGCAAACAAAAGGAGT
TGGAATCAGTCTGCACACCGATCATCACTAAATTGTACCAAGCTGCTGGC
GGACCACCCGGAGGAATGCCAGGTGGCGGTATGCCTGGAGGTGGTATGCC
AGGAGGAGCTGGTGCTCCACCACCATCATCAGGTGCTGGTGGCCCAACCA
TCGAAGAAGTCGATTAA Coding sequence (CDS) from alignment at sc0000101_pilon:28118..30034- >XLOC_044101 ID=XLOC_044101|Name=XLOC_044101|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3408bp|location=Sequence derived from alignment at sc0000101_pilon:28118..30034- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATTCATTTTTTTGTAGGTTGTTAATGTTGACTCAAAACCAAAGAT
CCAAGTCGAATACAAAGGTGAAACCAAAAAGTTTTTCCCTGAAGAAATCT
CATCCATGGTTCTCACCAAAATGAAGGAAGTTGCTGAATCTTATTTGGGC
AAAACTATCACTGATGCTGTAATTACCGTCCCTGCTTACTTCAATGATGG
GCAAAGACAAGCTACCAAAGATGCTGGTGTTATCGCTGGTCTCAATGTCC
TTCGTATTATCAACGAGCCTACTGCTGCTGCCATTGCCTACGGTCTTGAC
AAGAAAGTTGGCTCAGAAAAGAATGTCTTGATTTTCGATCTTGGTGGTGG
TACCTTTGATGTATCCATCCTTGCTATTGAAGATGGTATCTTTGAAGTTA
AATCTACCAATGGAAACACTCACTTGGGTGGAGAAGATTTTGACCACTTA
TTAGTCAACCATTGTAAAGGAGCTTTCAAAGCTAAGAATAAGAAGGACAT
TTCAAACAACAAAAGAGCTGTGCGTCGTCTCAGAACAGCTTGTGAAAGAG
CCAAGAGAACTCTCTCTGGTTCATCTCAAGCCAACATTGAAATTGATTCT
TTGTATGAGGGCATTGACTTTTATCACACAATCACCCGTGCTAAATTTGA
GGATCTCTGCAAGCAAGAGTTTTTGAATTGCTTAGACCCTGTTCGACTTT
GTCTGAGGGATTCAGGCTTAGAAAAGGCCCAAATCCATGATGTTGTTTTG
GTTGGTGGATCAACACGTATTCCTAAAATCCAAAAACTTTTGACAGACTT
TTTCAATGGAAAAGAATTGAACAAATCTATCAATCCAGATGAAGCTGTTG
CTTATGGTGCTGCTGTACAAGCTGCAATCTTGAGCGGATCCAAGGATGAA
GCTGTCCAAGACTTACTTTTACTCGATGTTGCTCCATTATCTTTGGGTAT
TGAAACCGCTGGAGGTGTGATGACTGCCCTTATTAAGAGAAATACCACCA
TTCCAACAAAACAGCAACAAACTTTCACAACTTATGCTGATAACCAACCT
GGTGTCTTGATTCAAGTCTTTGAAGGTGAGAGAGCTATGACTAAGGAGAA
CAACCATCTCGGTAAATTCGAACTTTCTGGAATTCCTCCAGCACCTAGAG
GTGTTCCACAAATTGAAGTGACCTTTGACATCGATGCTAACGGTATTTTG
AATGTCACTGCCACCGATAAATCCACTGGCAAAGAAAACAAGATCACTAT
CACCAATGACAAAGGAAGACTCAGCAAAGAAGACATTGAGAAAATGGTTG
CCGATGCTGAGAAATACAAAGCTGAAGATGAAGCGATCAAGGATAAGGTT
CAAGCCAAGAACGGACTCGAAAGCTACTCTTATCAAATGAAAACAACCAT
CGAAGACGAAAAAGTCAAGGACAAGATCAGTGAAGAGGACAAGACTGCCA
TTACCGACAAATGCAAGGAAACCTTGGACTGGCTTGATGCTAATCCAATG
ACATTCATTTTTTTGTAGGTTGTTAATGTTGACTCAAAACCAAAGATCCA
AGTCGAATACAAAGGTGAAACCAAAAAGTTTTTCCCTGAAGAAATCTCAT
CCATGGTTCTCACCAAAATGAAGGAAGTTGCTGAATCTTATTTGGGCAAA
ACTATCACTGATGCTGTAATTACCGTCCCTGCTTACTTCAATGATGGGCA
AAGACAAGCTACCAAAGATGCTGGTGTTATCGCTGGTCTCAATGTCCTTC
GTATTATCAACGAGCCTACTGCTGCTGCCATTGCCTACGGTCTTGACAAG
AAAGTTGGCTCAGAAAAGAATGTCTTGATTTTCGATCTTGGTGGTGGTAC
CTTTGATGTATCCATCCTTGCTATTGAAGATGGTATCTTTGAAGTTAAAT
CTACCAATGGAAACACTCACTTGGGTGGAGAAGATTTTGACCACTTATTA
GTCAACCATTGTAAAGGAGCTTTCAAAGCTAAGAATAAGAAGGACATTTC
AAACAACAAAAGAGCTGTGCGTCGTCTCAGAACAGCTTGTGAAAGAGCCA
AGAGAACTCTCTCTGGTTCATCTCAAGCCAACATTGAAATTGATTCTTTG
TATGAGGGCATTGACTTTTATCACACAATCACCCGTGCTAAATTTGAGGA
TCTCTGCAAGCAAGAGTTTTTGAATTGCTTAGACCCTGTTCGACTTTGTC
TGAGGGATTCAGGCTTAGAAAAGGCCCAAATCCATGATGTTGTTTTGGTT
GGTGGATCAACACGTATTCCTAAAATCCAAAAACTTTTGACAGACTTTTT
CAATGGAAAAGAATTGAACAAATCTATCAATCCAGATGAAGCTGTTGCTT
ATGGTGCTGCTGTACAAGCTGCAATCTTGAGCGGATCCAAGGATGAAGCT
GTCCAAGACTTACTTTTACTCGATGTTGCTCCATTATCTTTGGGTATTGA
AACCGCTGGAGGTGTGATGACTGCCCTTATTAAGAGAAATACCACCATTC
CAACAAAACAGCAACAAACTTTCACAACTTATGCTGATAACCAACCTGGT
GTCTTGATTCAAGTCTTTGAAGGTGAGAGAGCTATGACTAAGGAGAACAA
CCATCTCGGTAAATTCGAACTTTCTGGAATTCCTCCAGCACCTAGAGGTG
TTCCACAAATTGAAGTGACCTTTGACATCGATGCTAACGGTATTTTGAAT
GTCACTGCCACCGATAAATCCACTGGCAAAGAAAACAAGATCACTATCAC
CAATGACAAAGGAAGACTCAGCAAAGAAGACATTGAGAAAATGGTTGCCG
ATGCTGAGAAATACAAAGCTGAAGATGAAGCGATCAAGGATAAGGTTCAA
GCCAAGAACGGACTCGAAAGCTACTCTTATCAAATGAAAACAACCATCGA
AGACGAAAAAGTCAAGGACAAGATCAGTGAAGAGGACAAGACTGCCATTA
CCGACAAATGCAAGGAAACCTTGGACTGGCTTGATGCTAATCCAGAGGCA
TCAAAGGAAGAATTTGAGAGCAAACAAAAGGAGTTGGAATCAGTCTGCAC
ACCGATCATCACTAAATTGTACCAAGCTGCTGGCGGACCACCCGGAGGAA
TGCCAGGTGGCGGTATGCCTGGAGGTGGTATGCCAGGAGGAGCTGGTGCT
CCACCACCATCATCAGGTGCTGGTGGCCCAACCATCGAAGAAGTCGATTA
AGAGGCATCAAAGGAAGAATTTGAGAGCAAACAAAAGGAGTTGGAATCAG
TCTGCACACCGATCATCACTAAATTGTACCAAGCTGCTGGCGGACCACCC
GGAGGAATGCCAGGTGGCGGTATGCCTGGAGGTGGTATGCCAGGAGGAGC
TGGTGCTCCACCACCATCATCAGGTGCTGGTGGCCCAACCATCGAAGAAG
TCGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101_pilon | genome | sc0000101_pilon:28118..30034 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1498-1704:208 |
| Aaloc | 1-1497:1918 |
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