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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:632280..635261- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044087 ID=XLOC_044087|Name=XLOC_044087|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2982bp|location=Sequence derived from alignment at sc0000107_pilon:632280..635261- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACAAAATATGTTTTTATATTGGGGATCTGGTAGCACGCCATGTTG
GAGGGCTATGATTGTTTTGGAAGAAAAGCAGTTATCTGGTTATGGTCAAA
AATTGGTTTCCTTCTCAGCCAAAGAACATAAATCTGAAGAAATCATGAAA
ATCAATCCTAGAGGACAGGTATTTATCAATTACATTTAGTAGTGTAGACA
AGGGGGAGGGCGCAAAGTTTGTGTAGAAGAGCAGATTTTTATGACATGGT
AATTATCTTTTTGGACCTACCCCGTTGGAGGTCCTATAAATATTAACCTG
TGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTCGTTCGTCTGTTACCAACTTTTCTCAGGATTGAA
TTATAGGAATCTTTTGATTTTTGGTACAAAGGTGCAAAATGTGACAGAGC
CCGATTTTCGAAGAAAAAATTTTGGGGCAAATTTGGGCCAAAAAACGGCT
AAAAAACGGGTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTC
TGATTTTTTGCATGAAAGTAGGGTACGTCATCATAGTTAAAAGATGGCTC
AAGCAGATTTTTGCAAAAAAAATTTGTTGGCTCAAAAAACGCATTTTCAT
CTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTTTTCAAATTA
CTCAATTTTTTTATGAGATAGATGTTTTTTTTTGCTCATGAGGGCTTACT
TTTGAAGAATATGTGTGTTTAGACATGAAATTTTGGTTGCTTGGCGTGTT
TTTATAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACATTATCG
CAATTACTTAGGTAATCAACTTACTTTTCTCGAGATTGGCTCTTTCATGC
TTTATGATTTTTGGCACAAAGATGCATAACTATAAACCCGTCGAATGTGA
CGGAGCTTGATTTTCGAAAAAAAATGTTTTTGGGCAAATTTGGGCCAAAT
AACGGCTAAACAACAGGTTTTTTGGAGTTTGTGAAAAATTGGATCATTGT
TTCTTTCTGATTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAAGCAGGT
TTTTTGAAAAAAAGGATTTTTCATCCCAAAAAACGCATCTTTATCTATAA
GAATCACTATTAATAAGCATACATCAATGTTCTTAGCCAAATTACTCAAT
TTTTTGATGAGATAGATGTTTTTTTTGCTCACGAAGTCTTGAATATGAAA
GAATATTTCAAGAGCATGGCATGAAACTTTGGTTTCTAAACGTTTTTTTT
ATAAGAAACAAACGGAAATTTTAATAGATCATCACTATTTGTGTTCTGAA
TGATTGTTTAATGGTCACGCTCACGTAGATATCAATTATAAATGTGTTAA
ATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTATATTTTGAATA
GATAAATTACAGTGTCATGAAAATCTCCACAAATTTTGCGCTCCTCCTGT
CTACGCTACTGACGTTATCGGATAAATCTTTGTGAGATTTAATTTCGCTA
ATCGGGGTTTAGAATAAAATTAGAAGAATCTTCTGTTTTAGTTTTGAACT
AAAATTCCTATATTTGATTTTTGACCTTTTGTAAAAACTAACTAATTTAA
AAAATGAAGCTATACTTTACTATATTTTTGAAAAAACTTCTTTAACCAAG
CAGAATTTTTGTTAATTTTATGTTATGTATCTCCATGTTTCAGGTGCCAA
CTTTCAAACACGGTGATATTGTTTTGAATGAGTCGATGGGAATTTGCCAT
TATTTGGAGGTACAACTAAAGAACAAATTTTACAAGCATTATTCTTAGAT
TTTGTCCCAAGAAAAATTGCTCAACATTTACCACCCCTCACTATATTTGC
CATACAAGGAAGATTTGTATCTTGAAAAATTGAAAAGATAAAGCTAATTT
GAAGAATTTCATTTTCTGATTTTGGCGTAAATTCATTACCCTTAAGTCTA
CCCCTAATCTATTTTCCACCATGTGGAAATCATGTCAATTTTAATAGACA
AGTACTTTGAGGGTGGTTTGTTTGTACATGGTAGAGTACACTCAAAGTTG
ATGGACTTTTATTAACTGATATAATCAAGAGTTAGTTGGATTTCAAACTC
AGAACTTCATGATGCTTTCACGCCAATCTTGAGTTAAAATTATTGACTAA
TAAAAAATTATTATAAATTCTGTGTAATTTTTAGAGTCAATTCAAGAATC
AGGGAACGAAATTGATACCGGATAATGCAGAGAAGCAGGCCCTTGTGTTA
CAACGAATGTATGAGGTGAGAAAGTTCTTTTTGATTTTTTGAATGTCTAA
ATCAAAGTGGTTATTTGTACAATGCTTCGTGTGATGCATATTGAACGTTT
TGTAAAAATGAACATGGGCCCGTCGACAGAGCTCAATTAGATACATAGCG
ATAAGTATGTTTTAGGCTCACATACTTCAAATGGCTCGCCGAGGCCCATT
ATATAAAAAAGCTCGTGAGATGCCTATTTCACTTATCGCTTAAACAAATC
GGATTTTTTACAATTTTCCATCCTTCAGGTTGAAAATATCATTGACAAAG
CAAACCGTAAAATCATGTATTACATATGGTATAATAAAGAAAGCTTGGAT
GAGAATCTACTCACTGAACGACGACAAGCTCTAGGTACAGAGCTGAAAAT
CTGGGAAGAATTTCTGACAAACAAGAAGTACATCACAGGGGATGAGTTCA
CAATGGCTGATGCATTCTTTTTCCCACAAATCGCTATCTTGGTACGTGGA
AGTCTATCTTTTGAGAACCGACCCAATTTGAAACGTTACTATGAAGAGTT
ATCACAACGCCCTTCCATAATGGCTTCTTGGCCTCCACATTTTAAGGATA
CTCCACCTACGGAAATGTTCACCAAAATCTAA Coding sequence (CDS) from alignment at sc0000107_pilon:632280..635261- >XLOC_044087 ID=XLOC_044087|Name=XLOC_044087|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1338bp|location=Sequence derived from alignment at sc0000107_pilon:632280..635261- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACAAAATATGTTTTTATATTGGGGATCTGGTAGCACGCCATGTTG
GAGGGCTATGATTGTTTTGGAAGAAAAGCAGTTATCTGGTTATGGTCAAA
AATTGGTTTCCTTCTCAGCCAAAGAACATAAATCTGAAGAAATCATGAAA
ATCAATCCTAGAGGACAGATGGCACAAAATATGTTTTTATATTGGGGATC
TGGTAGCACGCCATGTTGGAGGGCTATGATTGTTTTGGAAGAAAAGCAGT
TATCTGGTTATGGTCAAAAATTGGTTTCCTTCTCAGCCAAAGAACATAAA
TCTGAAGAAATCATGAAAATCAATCCTAGAGGACAGGTGCCAACTTTCAA
ACACGGTGATATTGTTTTGAATGAGTCGATGGGAATTTGCCATTATTTGG
AGGTGCCAACTTTCAAACACGGTGATATTGTTTTGAATGAGTCGATGGGA
ATTTGCCATTATTTGGAGAGTCAATTCAAGAATCAGGGAACGAAATTGAT
ACCGGATAATGCAGAGAAGCAGGCCCTTGTGTTACAACGAATGTATGAGA
GTCAATTCAAGAATCAGGGAACGAAATTGATACCGGATAATGCAGAGAAG
CAGGCCCTTGTGTTACAACGAATGTATGAGGTTGAAAATATCATTGACAA
AGCAAACCGTAAAATCATGTATTACATATGGTATAATAAAGAAAGCTTGG
ATGAGAATCTACTCACTGAACGACGACAAGCTCTAGGTACAGAGCTGAAA
ATCTGGGAAGAATTTCTGACAAACAAGAAGTACATCACAGGGGATGAGTT
CACAATGGCTGATGCATTCTTTTTCCCACAAATCGCTATCTTGGTACGTG
GAAGTCTATCTTTTGAGAACCGACCCAATTTGAAACGTTACTATGAAGAG
TTATCACAACGCCCTTCCATAATGGCTTCTTGGCCTCCACATTTTAAGGA
TACTCCACCTACGGAAATGTTCACCAAAATCTAAGTTGAAAATATCATTG
ACAAAGCAAACCGTAAAATCATGTATTACATATGGTATAATAAAGAAAGC
TTGGATGAGAATCTACTCACTGAACGACGACAAGCTCTAGGTACAGAGCT
GAAAATCTGGGAAGAATTTCTGACAAACAAGAAGTACATCACAGGGGATG
AGTTCACAATGGCTGATGCATTCTTTTTCCCACAAATCGCTATCTTGGTA
CGTGGAAGTCTATCTTTTGAGAACCGACCCAATTTGAAACGTTACTATGA
AGAGTTATCACAACGCCCTTCCATAATGGCTTCTTGGCCTCCACATTTTA
AGGATACTCCACCTACGGAAATGTTCACCAAAATCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:632280..635261 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 316-669:355 |
| Aaloc | 235-315:699 |
| Aaloc | 169-234:1190 |
| Aaloc | 1-168:2983 |
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