|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:439275..441810- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044076 ID=XLOC_044076|Name=XLOC_044076|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2536bp|location=Sequence derived from alignment at sc0000089_pilon:439275..441810- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACAGTCACATGGAAGCAATGGAGCAGACCAACAGCAAACTGCAGC
AGTTGTTTGGTTGATTGTTGCTTTGGTCATTGGAATTGTTCTTTATCTAT
CCTACTTCTTTTCAAGTCAAGGGAAAAAGAAAAAAGAAAGTAAGTCAACC
TCTACCCTATAGCGCACTTTCTAATATGCCCTTTACGTTGCGTTGGGGTT
GTTCATTAGAGCTTATGACTTTAGTTTGAATTGAATATTTGTTTTGGAGG
ACGCAACGGCCTATTGAATAACTAATTATTCCACAACTGTTACAGTTACC
TAGAGACAAGATCATTTATCACGTTTTTATTGGCCGAGGGAAAGTAATGT
ATGTGGAGTAATTTGTTATTCAATAGGCTGTAGCATTCTCCAAAACAACT
ATCATAGAGGTTATTAGTATAGTATGGCTTTCGTAAAATGTATCATTAAT
CAACCACTTTTTTGATTGATTTTACTAGAAAAGACACCAGTTCCTGCAAG
ACCAAATGAGGCATCTCAAGGACCGGCAGTTGTTGGGCCAAGTGGGCGCC
GGAGAGGTCCAAGAATGAGAGTTCAAAGGAGAGATGAACCTGAACCTGAT
GATAATTTTGGTAAAAGAAATTGAATTTGATTGAATTACTATAATCATTA
TACTATCATTGGGGATAGAATTTTGTTTAGAAATAACTGTTTGTATTTCT
TTCTCTCTCTCCCTTGTTATCTTTCAATGTTTCCTTCTTTACAGGAGACT
TTGGAGGAGAAAGCGATAACGAAGTAATAGATGCATCAGGAGAAGGTGGA
GGGAAGATTGGTGCCAAGAAACGCGCAAAGATGATTGCCAAAGCTGAGAA
GAAAGCCGAACGAGAGGTTTGGAGCCTTCGAATGAGTTTTTTGTTGCTTC
TGACGCATTCTCTCCTTCATTGATGGCTCTTTCTCTGAAGTCTTGACTCT
CTACGCAATTACTACAAAATTAATTTTAGGTCAGAGAAAAAACTTGAATA
TGTTTCTCCCTTTGAACTCACGCGACTTTCTTTAAACAACGCTTTTTTTC
ATTGCAGGCGTTGGAAGAAGAAAGAGCAGAACGAAAAAAACAAGAAGCAC
TTTTAGAGAAAGAAAGAGAAAAAGATGCAAAACAAAGAGAAGCTGAGGAA
CTAGCCAAGGTTTGAACAAGAAACTTTGAACTGACATTCATGAAAATAAT
ATTGATCTAAGTCATGATAAACTTAAATTTTATTATCTTCTCAGACACCG
TCGAAAAAACTTGCATCCATTCATTCATTCATCCATCCATTCTTTGTTCT
TGTAGGAAGAAGAGCTTCGCCTTTTGAAAGAAAAGAAAGAAAAAGAGGAA
TATGAAGAATATTTGAAACTGAAAGAATCTTTCATCATCGAAGAATCTGG
CGAAATTGGAGTCCTATCCGAGGAAGAGGTAAAGTCCTCTCTTGTGAACT
TCTGTCTTATCAAACTTAACAACATCTTAAGAAAATACCAGAGTACAAAG
TACAATTGTTTAGTGAAGCATAATAGGAATCAATGTTTGAAATTTACTCA
ATTATACCTTTTAATTTATCTTTTAGAGTCAAGCCTTGCTACAAGAATTC
ATCGATTTCATAAAGGTACGGGTGTCAACCATGGACAGTTTTTTTTAGCG
TCAGCTTTAATTTGATCTTAGGTGCTTGTGTTCAAGCTCTTTCCAATCAG
AATAAAAAATATAACAGTTTTTGGAGAATTCCTAGAAGTAGCCCTCGAAA
TATTTTTTTTGCCCTCAACTTTCAGGATTTAATGTTTGCTTACAGCAAAT
ATATACAACTTCCATATTTTTCTCTTCTTGTAGGGGGCCAAGGTTGTACA
ACTAGAGGATTTAGCTTTGAAATTCAACTTAAAAACACAAGAAGTTATTG
AAAGATTGGAAAACCTTCAAGAAGCAGGACGGATAACAGGTATGTACCAA
CGAGCGTGGACCCTTTTCTTTTTTAGGGAATAAAGCCCTCACAAAATTTA
CAAAAACGGAGAATTTAAATGAAACCTTTTAAAGAAGTAAGCAACCACAG
GGGCATATTTATGAGATGAGCTCGAGTTTTTACAAGATACTTCACTAATT
GGTCATTTGAAGTGGTAGAGATGACGCGTTCTTTAGAAAAAGTAGCAAAA
TTGTTTTATCACTGGTTAACGACCAACCAAATCAAATAAGAGTTTGTCCC
ATATTTATATGGAGGGCAGGGGTAGGGATTTTGAAATGAGAAAATGTACA
TTATATCAAAGCTTTTCTTGCTTACTGTGAGTTTTTTTCAAGAAGAAAGA
ATTAGGTGGTTTTTGGGATGATCGACTCATCTTCTTGTAAATTTATTTTC
TTGCAGGGGTGATGGACGATCGTGGGAAAGTTTATTTTCATTTCTGAAGA
AGAGCTGAAAGCCGTCGCGAAATTCATCAAACAGCGTGGTCGAATTTCTA
TCGCTGAACTCGCCGAATCTTCCAATACCCTCATCACGTTACAGGAGAAA
GAAAATTCGAAATCTGTTATTCAAACGTCTGCTTAA Coding sequence (CDS) from alignment at sc0000089_pilon:439275..441810- >XLOC_044076 ID=XLOC_044076|Name=XLOC_044076|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1886bp|location=Sequence derived from alignment at sc0000089_pilon:439275..441810- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACAGTCACATGGAAGCAATGGAGCAGACCAACAGCAAACTGCAGC
AGTTGTTTGGTTGATTGTTGCTTTGGTCATTGGAATTGTTCTTTATCTAT
CCTACTTCTTTTCAAGTCAAGGGAAAAAGAAAAAAGAAAATGGCACAGTC
ACATGGAAGCAATGGAGCAGACCAACAGCAAACTGCAGCAGTTGTTTGGT
TGATTGTTGCTTTGGTCATTGGAATTGTTCTTTATCTATCCTACTTCTTT
TCAAGTCAAGGGAAAAAGAAAAAAGAAAAAAAGACACCAGTTCCTGCAAG
ACCAAATGAGGCATCTCAAGGACCGGCAGTTGTTGGGCCAAGTGGGCGCC
GGAGAGGTCCAAGAATGAGAGTTCAAAGGAGAGATGAACCTGAACCTGAT
GATAATTTTGAAAAGACACCAGTTCCTGCAAGACCAAATGAGGCATCTCA
AGGACCGGCAGTTGTTGGGCCAAGTGGGCGCCGGAGAGGTCCAAGAATGA
GAGTTCAAAGGAGAGATGAACCTGAACCTGATGATAATTTTGGAGACTTT
GGAGGAGAAAGCGATAACGAAGTAATAGATGCATCAGGAGAAGGTGGAGG
GAAGATTGGTGCCAAGAAACGCGCAAAGATGATTGCCAAAGCTGAGAAGA
AAGCCGAACGAGAGGAGACTTTGGAGGAGAAAGCGATAACGAAGTAATAG
ATGCATCAGGAGAAGGTGGAGGGAAGATTGGTGCCAAGAAACGCGCAAAG
ATGATTGCCAAAGCTGAGAAGAAAGCCGAACGAGAGGCGTTGGAAGAAGA
AAGAGCAGAACGAAAAAAACAAGAAGCACTTTTAGAGAAAGAAAGAGAAA
AAGATGCAAAACAAAGAGAAGCTGAGGAACTAGCCAAGGCGTTGGAAGAA
GAAAGAGCAGAACGAAAAAAACAAGAAGCACTTTTAGAGAAAGAAAGAGA
AAAAGATGCAAAACAAAGAGAAGCTGAGGAACTAGCCAAGGAAGAAGAGC
TTCGCCTTTTGAAAGAAAAGAAAGAAAAAGAGGAATATGAAGAATATTTG
AAACTGAAAGAATCTTTCATCATCGAAGAATCTGGCGAAATTGGAGTCCT
ATCCGAGGAAGAGGAAGAAGAGCTTCGCCTTTTGAAAGAAAAGAAAGAAA
AAGAGGAATATGAAGAATATTTGAAACTGAAAGAATCTTTCATCATCGAA
GAATCTGGCGAAATTGGAGTCCTATCCGAGGAAGAGAGTCAAGCCTTGCT
ACAAGAATTCATCGATTTCATAAAGAGTCAAGCCTTGCTACAAGAATTCA
TCGATTTCATAAAGGGGGCCAAGGTTGTACAACTAGAGGATTTAGCTTTG
AAATTCAACTTAAAAACACAAGAAGTTATTGAAAGATTGGAAAACCTTCA
AGAAGCAGGACGGATAACAGGGGGCCAAGGTTGTACAACTAGAGGATTTA
GCTTTGAAATTCAACTTAAAAACACAAGAAGTTATTGAAAGATTGGAAAA
CCTTCAAGAAGCAGGACGGATAACAGGGGTGATGGACGATCGTGGGAAAG
TTTATTTTCATTTCTGAAGAAGAGCTGAAAGCCGTCGCGAAATTCATCAA
ACAGCGTGGTCGAATTTCTATCGCTGAACTCGCCGAATCTTCCAATACCC
TCATCACGTTACAGGAGAAAGAAAATTCGAAATCTGTTATTCAAACGTCT
GCTTAAGGGTGATGGACGATCGTGGGAAAGTTTATTTTCATTTCTGAAGA
AGAGCTGAAAGCCGTCGCGAAATTCATCAAACAGCGTGGTCGAATTTCTA
TCGCTGAACTCGCCGAATCTTCCAATACCCTCATCACGTTACAGGAGAAA
GAAAATTCGAAATCTGTTATTCAAACGTCTGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:439275..441810 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 781-942:163 |
| Aaloc | 766-780:179 |
| Aaloc | 658-762:704 |
| Aaloc | 619-657:961 |
| Aaloc | 496-618:1232 |
| Aaloc | 394-495:1480 |
| Aaloc | 274-393:1791 |
| Aaloc | 142-270:2057 |
| Aaloc | 1-138:2537 |
|
