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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:501074..502908- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044075 ID=XLOC_044075|Name=XLOC_044075|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1835bp|location=Sequence derived from alignment at sc0000089_pilon:501074..502908- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTGGGATTTGGGCCATCTTTGGTTACGATCATCAAGCTTCGTCAGA
ACTCCATCATGCTCTCCTCATCGCTCACCGAGGACCGGATTTCTTCCGTA
TCGAAAGTCTTCCGAACTTCAAACACTCCTACTTAGCGTTCCATCGACTC
TCCATCATGGATAATTTGACAGGACAACAACCCATGCGTTTGTATTCACT
ACCTCACATCCATCTCACGTACAACGGTGAAATCTATAACTTCAAAGAAC
TCTTCCAAAAATATGGATTTGAACAAACGACATCGTAAGTTAAAAATATT
CATTTTGAATTTCACCATGTGAAAAGATTTCTCGACATCCTTTGCAACCT
CAACCATTCAAAACTTCCACAAATGACACAAACTGTAAATTGGGCAGTTC
TAGTCAATTTCTTCCAAAAGAATGATTTAATAAATGAGTTTCCCTCTCTC
ATAGAATGGACGGTGAGATCATCATTCATCTTTACAACAAATTTGGCATG
GAGAAAACATTACAATTACTGGATGGAGTGTTCGCTGTCTCCATTTTTGA
TTCGGAAAATGGAACTTTCCACATTGGAAGAGACACATTCGGGGTGCGTC
CGTTATTCACGTTACGTCCGGATTCCGGTGAGTTAGGAGTTTCATCCGAA
GCTAAAGGTTTGATTGGTTTGAACAAATCGAACGGAAAAGCAAGACCTAT
CAAGCAACTGAAGCCTGGAACCTATGCTACCTTCAACATCTGTAAAGAAA
CTGGCCTCTCTAAATTGTTAGAAGAAAAATCTTTCACAGATGTCGACGTT
CCACAAGCCTTCGACATTCCAATCACGCTCACCGATGACGTCAAAGAAAA
CATCCGCAACCTGTTGACTGATGCTGTCCGAAAGCGATTGATGGCCGAAC
GGAGGATAGGATGTTTGCTCTCCGGTGGACTTGATTCTAGTCTAGTTGCA
GCATTGGTTGTCAAGCTATCCAGAGAAATGGGCATCAAATACCCCATCCA
AACCTTTTCAATCGGCTTCCCAGGATCACCTGATGTAATGAAAGCACGAA
AGGTGGCCGAAATGTTGCAGACAGAGCACCACGAAGTCCTCATCACACCA
CAAGAAGCTTTAGATGCTCTTCCTGATGTAAACTATGCCTTAGAGAGTTA
TGACATCACCACAAACAGGGCGTCCACACCCATGTTTTTGTTGGCCAAAT
ACATCCGCAAAAACACAAACACCGTCGTCATTTTCTCCGGCGAAGGATCA
GACGAGCTCACTCAAGGTTACATCTACTTCCACAAAGCACCAACGCCCGA
AGCCGCCCATGAAGATTCCAAACGCCTCCTGCGTGAATTGTACATCTTTG
ACAACTTGAGGGCGGATCGAACCATCTCCGCCCATGGATTGGAGCTACGT
GTACCTTTCTTGGACAAAGCTTTCACCTCATATTACCTCTCCATCGATAA
ACAACTCGTCCAACCGAAAGATGGCGTCGAAAAATTCCTCCTTCGCTCGG
CGTTTGATGGCCACCTCAAAGGCCTGCTACCGGATGAGATCTTATGGCGA
CCCAAAGAAGCATTTAGTGATGGAATCTCTCAGAAAACTGATTCATGGTT
TTCACACATCCAACGCCATGCAGCTACACTTTTCACCAAACAACAACTGG
AAGAAGCTGCCGAGAAATTCCCTATCAACCCACCTTTCTCCTTCGAAAGC
CTGTATTACCGCACCATGTTTGAATCCAAGTATCCTGGTCAGTGCCATAT
ATTGCCATACTTTTGGATGCCCAGATGGCAAGAGGGAGATGTGAAAGATC
CCTCAGCTAGAGTGCTGACTAACTATAAACAATAA Coding sequence (CDS) from alignment at sc0000089_pilon:501074..502908- >XLOC_044075 ID=XLOC_044075|Name=XLOC_044075|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3330bp|location=Sequence derived from alignment at sc0000089_pilon:501074..502908- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTGGGATTTGGGCCATCTTTGGTTACGATCATCAAGCTTCGTCAGA
ACTCCATCATGCTCTCCTCATCGCTCACCGAGGACCGGATTTCTTCCGTA
TCGAAAGTCTTCCGAACTTCAAACACTCCTACTTAGCGTTCCATCGACTC
TCCATCATGGATAATTTGACAGGACAACAACCCATGCGTTTGTATTCACT
ACCTCACATCCATCTCACGTACAACGGTGAAATCTATAACTTCAAAGAAC
TCTTCCAAAAATATGGATTTGAACAAACGACATCATGTGTGGGATTTGGG
CCATCTTTGGTTACGATCATCAAGCTTCGTCAGAACTCCATCATGCTCTC
CTCATCGCTCACCGAGGACCGGATTTCTTCCGTATCGAAAGTCTTCCGAA
CTTCAAACACTCCTACTTAGCGTTCCATCGACTCTCCATCATGGATAATT
TGACAGGACAACAACCCATGCGTTTGTATTCACTACCTCACATCCATCTC
ACGTACAACGGTGAAATCTATAACTTCAAAGAACTCTTCCAAAAATATGG
ATTTGAACAAACGACATCAATGGACGGTGAGATCATCATTCATCTTTACA
ACAAATTTGGCATGGAGAAAACATTACAATTACTGGATGGAGTGTTCGCT
GTCTCCATTTTTGATTCGGAAAATGGAACTTTCCACATTGGAAGAGACAC
ATTCGGGGTGCGTCCGTTATTCACGTTACGTCCGGATTCCGGTGAGTTAG
GAGTTTCATCCGAAGCTAAAGGTTTGATTGGTTTGAACAAATCGAACGGA
AAAGCAAGACCTATCAAGCAACTGAAGCCTGGAACCTATGCTACCTTCAA
CATCTGTAAAGAAACTGGCCTCTCTAAATTGTTAGAAGAAAAATCTTTCA
CAGATGTCGACGTTCCACAAGCCTTCGACATTCCAATCACGCTCACCGAT
GACGTCAAAGAAAACATCCGCAACCTGTTGACTGATGCTGTCCGAAAGCG
ATTGATGGCCGAACGGAGGATAGGATGTTTGCTCTCCGGTGGACTTGATT
CTAGTCTAGTTGCAGCATTGGTTGTCAAGCTATCCAGAGAAATGGGCATC
AAATACCCCATCCAAACCTTTTCAATCGGCTTCCCAGGATCACCTGATGT
AATGAAAGCACGAAAGGTGGCCGAAATGTTGCAGACAGAGCACCACGAAG
TCCTCATCACACCACAAGAAGCTTTAGATGCTCTTCCTGATGTAAACTAT
GCCTTAGAGAGTTATGACATCACCACAAACAGGGCGTCCACACCCATGTT
TTTGTTGGCCAAATACATCCGCAAAAACACAAACACCGTCGTCATTTTCT
CCGGCGAAGGATCAGACGAGCTCACTCAAGGTTACATCTACTTCCACAAA
GCACCAACGCCCGAAGCCGCCCATGAAGATTCCAAACGCCTCCTGCGTGA
ATTGTACATCTTTGACAACTTGAGGGCGGATCGAACCATCTCCGCCCATG
GATTGGAGCTACGTGTACCTTTCTTGGACAAAGCTTTCACCTCATATTAC
CTCTCCATCGATAAACAACTCGTCCAACCGAAAGATGGCGTCGAAAAATT
CCTCCTTCGCTCGGCGTTTGATGGCCACCTCAAAGGCCTGCTACCGGATG
AGATCTTATGGCGACCCAAAGAAGCATTTAGTGATGGAATCTCTCAGAAA
ACTGATTCATGGTTTTCACACATCCAACGCCATGCAGCTACACTTTTCAC
CAAACAACAACTGGAAGAAGCTGCCGAGAAATTCCCTATCAACCCACCTT
TCTCCTTCGAAAGCCTGTATTACCGCACCATGTTTGAATCCAAGTATCCT
GGTCAGTGCCATATATTGCCATACTTTTGGATGCCCAGATGGCAAGAGGG
AGATGTGAAAGATCCCTCAGCTAGAGTGCTGACTAACTATAAACAATAAA
ATGGACGGTGAGATCATCATTCATCTTTACAACAAATTTGGCATGGAGAA
AACATTACAATTACTGGATGGAGTGTTCGCTGTCTCCATTTTTGATTCGG
AAAATGGAACTTTCCACATTGGAAGAGACACATTCGGGGTGCGTCCGTTA
TTCACGTTACGTCCGGATTCCGGTGAGTTAGGAGTTTCATCCGAAGCTAA
AGGTTTGATTGGTTTGAACAAATCGAACGGAAAAGCAAGACCTATCAAGC
AACTGAAGCCTGGAACCTATGCTACCTTCAACATCTGTAAAGAAACTGGC
CTCTCTAAATTGTTAGAAGAAAAATCTTTCACAGATGTCGACGTTCCACA
AGCCTTCGACATTCCAATCACGCTCACCGATGACGTCAAAGAAAACATCC
GCAACCTGTTGACTGATGCTGTCCGAAAGCGATTGATGGCCGAACGGAGG
ATAGGATGTTTGCTCTCCGGTGGACTTGATTCTAGTCTAGTTGCAGCATT
GGTTGTCAAGCTATCCAGAGAAATGGGCATCAAATACCCCATCCAAACCT
TTTCAATCGGCTTCCCAGGATCACCTGATGTAATGAAAGCACGAAAGGTG
GCCGAAATGTTGCAGACAGAGCACCACGAAGTCCTCATCACACCACAAGA
AGCTTTAGATGCTCTTCCTGATGTAAACTATGCCTTAGAGAGTTATGACA
TCACCACAAACAGGGCGTCCACACCCATGTTTTTGTTGGCCAAATACATC
CGCAAAAACACAAACACCGTCGTCATTTTCTCCGGCGAAGGATCAGACGA
GCTCACTCAAGGTTACATCTACTTCCACAAAGCACCAACGCCCGAAGCCG
CCCATGAAGATTCCAAACGCCTCCTGCGTGAATTGTACATCTTTGACAAC
TTGAGGGCGGATCGAACCATCTCCGCCCATGGATTGGAGCTACGTGTACC
TTTCTTGGACAAAGCTTTCACCTCATATTACCTCTCCATCGATAAACAAC
TCGTCCAACCGAAAGATGGCGTCGAAAAATTCCTCCTTCGCTCGGCGTTT
GATGGCCACCTCAAAGGCCTGCTACCGGATGAGATCTTATGGCGACCCAA
AGAAGCATTTAGTGATGGAATCTCTCAGAAAACTGATTCATGGTTTTCAC
ACATCCAACGCCATGCAGCTACACTTTTCACCAAACAACAACTGGAAGAA
GCTGCCGAGAAATTCCCTATCAACCCACCTTTCTCCTTCGAAAGCCTGTA
TTACCGCACCATGTTTGAATCCAAGTATCCTGGTCAGTGCCATATATTGC
CATACTTTTGGATGCCCAGATGGCAAGAGGGAGATGTGAAAGATCCCTCA
GCTAGAGTGCTGACTAACTATAAACAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:501074..502908 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 286-1665:1381 |
| Aaloc | 1-282:1836 |
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