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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:531388..533619+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044074 ID=XLOC_044074|Name=XLOC_044074|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2232bp|location=Sequence derived from alignment at sc0000089_pilon:531388..533619+ (Clytia hemisphaerica_ch_hm2_pilon)
ggtaATGAAGAACAAGACAGCGCTTTAATGGAAATCCACTTATTAGCACA
AGCCTCTCAATATCTTCCTCGCGATGTAATCATAGCCAAAATTCGAGAAA
TCCAAGATAAAATGAAACCAAAACCTGTACTAAGGCCTCGATTACCCAGA
CCATCTCCGTTTGTGACAGAAATTGATCGAGACCATCCGATATTTATTCG
ACAGttctattcttttgttttgactgGTAATACAACCGGACATTTTCGTG
TAGTTAGTACACCAGTACATTTTGGTGAGTTGGATTTCATGGAcgatatt
ttgaaagatttaaacGATGTAGCAATATACGAGTtggtaaaatttctttt
gaagttgaaggaaaaatatttttgtcgaacGAAATTCTTGTTGATGGTTT
acttgaagtttgtttttgcgTCCAATCAAAAGACTTCGAAACAAGCGATC
GACAATTTCGATAAAATTTGTGATACTGGTTCTTTATTGTTTCAATTTAT
GTCATTAAGTGAGAAATTGTACAATCATATTCATGGAGCGCCAGATGTAC
CACAACTTTCCAAAGATGAGCTACTGAGAAAAAGACTGGCacgttttgaa
aaaatgaacgtTCCATCCGCCAAAGCTTTACCTCCACATGATACGAACAG
TAAATTTTCAGCTAGTCATTCTGCCGTCACAACTTTACCTAGCAACTCAG
CCGCTACATCTTCTCAAAAGCCTAGCAGCTCAGCAGCTTCAGAAATCGTT
CCCATGGACTTTGATAAGCCaatcaaaaagaagaagaagaagaagaagaa
gaaaagaataaaGGTGAAGCATCCGAAACCATCTAAAAAGCCGGTCAAAG
TtcacaaaaaatgtaaattgaaACTCAGACATAAAAGCTTGCGTAAATGT
TTCACAAAATTTCTTGATGCCACTCCACCTGGTTTGTTATTGTTCTTCAT
GTCACGTGACGTCGAGTGGGAGCGAAAAGAAGAATACGACTTTGTAGAct
tcaaatatcttttcaaacaTTTACACCCAAAAATAACTAAGGATGCAGAT
TTGAAGAATTTGATAATTATTAATCATTTAAgtggaaatgaaaaatttcg
GGAACAAGCAGATAACTACGTGGAGCAAAACCCGGTCTTGCAGAATACCG
AAAATATAGTTTTAAACGGGATTATAACtaccgaaaatttgaaaacggat
TTCGCGTATAAAGGCTTATTTGGAGGGGAACAAGTTCACAATAGGAACAG
TTTAAACATGATGCTTTATAAATGGGGAGAATTAGGGAAAAGAATTTGGA
CAGATGTTTCGGACACTTCAACAAAATGTGTGGAATTTTCGGACGAATAT
TCGTTAGACCAAGAGAAATATTTTCGATTGACTTATGAACATATAATCGA
ACACCATCGGTATCAACCAAAGGTAGGTTTGAGTAATGACCATTATCCTT
CACTCTCTTTTCGATCGATGTACTGACTTTTATATATCcttggaccaagc
tatatccgccatctttgatcgaagtttttttgaaagttgtgcCCAccaag
aagccattgtagtgtttgaaattttgtcCAATGACAAACCGCGCTACATC
ATTAGTGTGTAAAAgcgaaactagatctagcgctctctccgttggtacca
atttcaaaaaaactccgatcgtgatattttgcttggccggcattgagtaa
cttggtccagggatatataatgGATGGATGCAATAACTGCCATCGTGATC
TTCTATCAAAAAGGTGTCACGAAAATTTGTTAGATTAAAGTCCGAGTTTC
TTAAGAGAAGTTgcacgatgttatcgtccgttaaatggagtaaacgcggg
aaaatatatatttgcgCGGAGTATGCAGCCGTCAGGACAGTTTACGGGAA
AATAGCGGTGGtactgtaaacacctccaccCCTTCTCACTCCGTCCTGGG
CTAGACTCCGTTTTTTAATTTATCCCGCCTCctaaattattcccttttta
AGGGACCTGCTCTACGAATGGGATATTGTAAAGAGAAATGAACTTagaat
actttttttatttgtaggTATGGGTAGAAATTGTTGAGGACCTCCCTTAC
ATGTTGGTTCTGGAGAAATTGGAATTCATTTTCGAACGAAATCAATTGAT
TGGAAACAAACAGCttgttttcaaacttcaaaTGATTATCGAAAGTATCA
ACCGAGTGATTGCTGCCAAAGTTCACCCTACA Coding sequence (CDS) from alignment at sc0000089_pilon:531388..533619+ >XLOC_044074 ID=XLOC_044074|Name=XLOC_044074|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3174bp|location=Sequence derived from alignment at sc0000089_pilon:531388..533619+ (Clytia hemisphaerica_ch_hm2_pilon)
ggtaATGAAGAACAAGACAGCGCTTTAATGGAAATCCACTTATTAGCACA
AGCCTCTCAATATCTTCCTCGCGATGTAATCATAGCCAAAATTCGAGAAA
TCCAAGATAAAATGAAACCAAAACCTGTACTAAGGCCTCGATTACCCAGA
CCATCTCCGTTTGTGACAGAAATTGATCGAGACCATCCGATATTTATTCG
ACAGttctattcttttgttttgactgGTAATACAACCGGACATTTTCGTG
TAGTTAGTACACCAGTACATTTTGGTGAGTTGGATTTCATGGAcgatatt
ttgaaagatttaaacGATGTAGCAATATACGAGTtggtaaaatttctttt
gaagttgaaggaaaaatatttttgtcgaacGAAATTCTTGTTGATGGTTT
acttgaagtttgtttttgcgTCCAATCAAAAGACTTCGAAACAAGCGATC
GACAATTTCGATAAAATTTGTGATACTGGTTCTTTATTGTTTCAATTTAT
GTCATTAAGTGAGAAATTGTACAATCATATTCATGGAGCGCCAGATGTAC
CACAACTTTCCAAAGATGAGCTACTGAGAAAAAGACTGGCacgttttgaa
aaaatgaacgtTCCATCCGCCAAAGCTTTACCTCCACATGATACGAACAG
TAAATTTTCAGCTAGTCATTCTGCCGTCACAACTTTACCTAGCAACTCAG
CCGCTACATCTTCTCAAAAGCCTAGCAGCTCAGCAGCTTCAGAAATCGTT
CCCATGGACTTTGATAAGCCaatcaaaaagaagaagaagaagaagaagaa
gaaaagaataaaGGTGAAGCATCCGAAACCATCTAAAAAGCCGGTCAAAG
TtcacaaaaaatgtaaattgaaACTCAGACATAAAAGCTTGCGTAAATGT
TTCACAAAATTTCTTGATGCCACTCCACCTGGTTTGTTATTGTTCTTCAT
GTCACGTGACGTCGAGTGGGAGCGAAAAGAAGAATACGACTTTGTAGAct
tcaaatatcttttcaaacaTTTACACCCAAAAATAACTAAGGATGCAGAT
TTGAAGAATTTGATAATTATTAATCATTTAAgtggaaatgaaaaatttcg
GGAACAAGCAGATAACTACGTGGAGCAAAACCCGGTCTTGCAGAATACCG
AAAATATAGTTTTAAACGGGATTATAACtaccgaaaatttgaaaacggat
TTCGCGTATAAAGGCTTATTTGGAGGGGAACAAGTTCACAATAGGAACAG
TTTAAACATGATGCTTTATAAATGGGGAGAATTAGGGAAAAGAATTTGGA
CAGATGTTTCGGACACTTCAACAAAATGTGTGGAATTTTCGGACGAATAT
TCGTTAGACCAAGAGAAATATTTTCGATTGACTTATGAACATATAATCGA
ACACCATCGGTATCAACCAAAGggtaATGAAGAACAAGACAGCGCTTTAA
TGGAAATCCACTTATTAGCACAAGCCTCTCAATATCTTCCTCGCGATGTA
ATCATAGCCAAAATTCGAGAAATCCAAGATAAAATGAAACCAAAACCTGT
ACTAAGGCCTCGATTACCCAGACCATCTCCGTTTGTGACAGAAATTGATC
GAGACCATCCGATATTTATTCGACAGttctattcttttgttttgactgGT
AATACAACCGGACATTTTCGTGTAGTTAGTACACCAGTACATTTTGGTGA
GTTGGATTTCATGGAcgatattttgaaagatttaaacGATGTAGCAATAT
ACGAGTtggtaaaatttcttttgaagttgaaggaaaaatatttttgtcga
acGAAATTCTTGTTGATGGTTTacttgaagtttgtttttgcgTCCAATCA
AAAGACTTCGAAACAAGCGATCGACAATTTCGATAAAATTTGTGATACTG
GTTCTTTATTGTTTCAATTTATGTCATTAAGTGAGAAATTGTACAATCAT
ATTCATGGAGCGCCAGATGTACCACAACTTTCCAAAGATGAGCTACTGAG
AAAAAGACTGGCacgttttgaaaaaatgaacgtTCCATCCGCCAAAGCTT
TACCTCCACATGATACGAACAGTAAATTTTCAGCTAGTCATTCTGCCGTC
ACAACTTTACCTAGCAACTCAGCCGCTACATCTTCTCAAAAGCCTAGCAG
CTCAGCAGCTTCAGAAATCGTTCCCATGGACTTTGATAAGCCaatcaaaa
agaagaagaagaagaagaagaagaaaagaataaaGGTGAAGCATCCGAAA
CCATCTAAAAAGCCGGTCAAAGTtcacaaaaaatgtaaattgaaACTCAG
ACATAAAAGCTTGCGTAAATGTTTCACAAAATTTCTTGATGCCACTCCAC
CTGGTTTGTTATTGTTCTTCATGTCACGTGACGTCGAGTGGGAGCGAAAA
GAAGAATACGACTTTGTAGActtcaaatatcttttcaaacaTTTACACCC
AAAAATAACTAAGGATGCAGATTTGAAGAATTTGATAATTATTAATCATT
TAAgtggaaatgaaaaatttcgGGAACAAGCAGATAACTACGTGGAGCAA
AACCCGGTCTTGCAGAATACCGAAAATATAGTTTTAAACGGGATTATAAC
taccgaaaatttgaaaacggatTTCGCGTATAAAGGCTTATTTGGAGGGG
AACAAGTTCACAATAGGAACAGTTTAAACATGATGCTTTATAAATGGGGA
GAATTAGGGAAAAGAATTTGGACAGATGTTTCGGACACTTCAACAAAATG
TGTGGAATTTTCGGACGAATATTCGTTAGACCAAGAGAAATATTTTCGAT
TGACTTATGAACATATAATCGAACACCATCGGTATCAACCAAAGgTATGG
GTAGAAATTGTTGAGGACCTCCCTTACATGTTGGTTCTGGAGAAATTGGA
ATTCATTTTCGAACGAAATCAATTGATTGGAAACAAACAGCttgttttca
aacttcaaaTGATTATCGAAAGTATCAACCGAGTGATTGCTGCCAAAGTT
CACCCTACAgTATGGGTAGAAATTGTTGAGGACCTCCCTTACATGTTGGT
TCTGGAGAAATTGGAATTCATTTTCGAACGAAATCAATTGATTGGAAACA
AACAGCttgttttcaaacttcaaaTGATTATCGAAAGTATCAACCGAGTG
ATTGCTGCCAAAGTTCACCCTACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:531388..533619 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1411-1575:2068 |
| Aaloc | 1210-1410:1222 |
| Aaloc | 775-1209:784 |
| Aaloc | 1-774:1 |
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