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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:608797..612845- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044070 ID=XLOC_044070|Name=XLOC_044070|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4049bp|location=Sequence derived from alignment at sc0000089_pilon:608797..612845- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAATTTCAATTCAATTTGTTGGACTGTTCAGAAGATTTAGGGAC
TTGCTCACGGACCTTTTTATGCCCGTGCGTGACGGCGGGAGAGAACGCCA
GGGCCGTTGACAAATCTTGCTTTTTGTTTGGTTTGATGTCAGTTCTTCCA
CTGTGTATGTTTACGAATGGTCACGTGAGAAAACTCATTCGACACAAATA
TAACATCAAGGTAATTCCATTGATCCAAACCCTTAGATGGGAAATGAAGG
CCAAAACGCGTGACCAACTTGGCTTTCACACAACTTGAAAGTAAAACTTA
TTGCTAGATTTCGAAAAATATCCCGCTAAACTTTTTCTTGGTTGAGAAAG
GTTAAAGGTTCCTCTCTAGCTCTTTCGGGGCTTAAGCTCAATGGCTGATT
CTTTTTAACCTGGATTATTGAATGACTCAAAAAAGAGGTCAAATTTATGA
ACCTTTGAGTTTGTTAGAAATAGGTGAAAATCTTTTCATATGCTGCTATG
TGTTCGTTGGAAGGATAATTATGAGTTATTTATTGAATTATACTTTTTCA
ATACGAAAATGTAGAGAGAAAACGCCTTATAAAAATACATGTTAATCTAA
ATAAAGCATTTGCCAAAAAATATTTCAACTTGATCAAAGAATATTCAATG
TTCAAATGTTTGTGGCTTGACTTAATGAAGGAAGCTTTCCAAAAGCTTAT
CTTCCTGATCACGTTCGGCGTTTCGTTTCTTTGATAAAAAATCTTCTTTT
CCTGGGGGAAAATAATTGTCTAAGCCAAGTAAAGGATCATTTGCCAAAGG
TGGAAAATATTCTGAAACCAGCAAATCGTCTTTTTGTTGAGATGGCAGGT
AGACGTCCGAAGGGTCGTTTTGAGGTGGGATGTATCCTGAAACTAGCAAA
ATCGTCTTTTTGTTGAGATGGTAGGTAGACGTCCGAAGGGTCGTTTTGAG
GTGGGATGTATCCTGAAACTAGCAAATCGTCTTTTTGTTGAGATGGCAGG
TAGACGTCCGAAGGGTCGTTTTGAGGTGGGATGTATCCTGAAACTAGCAA
ATCGTCTTTTTGTTGAGATGGTAGGTAGACGTCCGAAGGGTCGTTTTGAG
GTGGGATGTATCCTGAAACTAGCAAATCGTCTTTTTGTTGAGATGGTAAG
TAGACGTCCGAAGTGTCGTTTTGAGGTGGGATGTATCCTGAAACCAGCAA
ATCTCGGTATTCCAGTTCAGGAAGAACGTCACTTTCTTCTAAAAATACAA
AGAAATCAAATTCATCTTCAATCACAATCAATGAGGTGGGATATTGTGAT
AATGAGAAAATACTTCAAGAAAAAAAGCTATAATGGACACATTTTATTGG
TTAAATAAAACTCAACAAAATACCTTTAAGTGGAAACCCATAAAGAGCAT
TCCATTGAAGCGCCAAAGTGATCAAAATGAGTCGCATGTCCATCATGAAT
AATAGCCGAGTTTAAGTGGTATGGATGTTCTTCCCCCACTTAAGTTATAT
CCTTGCAACTCGGTGGTTTTTCATGAAAAGCTATTACGTTTGTTTTGCTG
TCGTGTAAAATAAACACCATACACAAAATCTTTTCTCTGTCAAAAGTGGC
AGCCATTATTATGTTGAACATTGAATGAAAATTCTTCCTACTTCCATCAG
ATAAAAGATTGTTTTGTTTATCGCAATGTCGTGTAAAACACACACCAAAT
TACATATTTATTTTCCGCTCAAACTGAAGCGCACCTCGGTTTTTCAAAAA
GAGTTTCGTTTGTTTTTTGGATGAGTTAACAATCAAATTCAATAGTGCAC
CCCCTTCTCACAGACCATTGAAATTGATAGACATTTGAAAATAATGAAAT
AAACCAATCCTCACTGCAAAACATTTACTATCTTTCTCATCTCCACTCGA
TTTTCTTTTTTTAAAACAAAAGAATTGAAATCTTGATTGATAAAAAATAT
GAGAATATCAATCCCCATCGAGTTTCAGTCTGTTTTTTTCATCCCTACTG
CTACTGGCTGTCCTTCCGGGTCTGTGAGAAGGGGGTGTACTAGTGCAATC
CTAAAAGTCGCCTTTCTTGAGTTGTCTATGGCGGGATTTCGTTAGTTTAG
GAAAACCTTCCTTAGATACCAGAAACACCAGGAGGGTCTTTTTCTGTTTA
TTTTCCTACGTAAACACGTAACACGTTTTTGATTGGAGGAATCCTCATGA
AGAAACACGTAAGATGTCGAAATATCATTCATAGTAAAAATGGAGAAAAG
GAGAGTGTCAAAACTAAAAAGCTCTACTAAAAAAGCGGAAGAAAATACGT
CTGCATTGGAAAAACTATTTTTTATGTTATTAACCTTTATGAACTTTATG
AACCTACAATCATGGACATAAGGTCTGTAGACTTTTCAAAAATTCCTCAA
TAGTGCCAAAAAAAAGCCTTTTTGACGCTTGGGAAATTTCCCAAATGAAC
CACAAGTGGTTATTTGGCAGAAAACACCTACAGGCTTCCTAACACTCCAT
GTAGCTTTTAGTCCTTGTGATTTTTGGACTTTTTTGGTGCACCAGACAGC
TCTGAAAAGTTGTTTACTTTTTATTAAACCATCTCAAATATGGTCTAATT
AGATATCTTCTCGAATAAGTTGAAGAGCAAAGCTCAGTGAAACCTTCAAT
CTTAGACAAAAAAAGGTCTGAAGAACTTGCAAAAATTCATTTCCTTCAAT
CTTGAGTGGATTTGGCTTATGGACTTGTTACCCAAACTCTCCAAATCCGA
TAAAAACAACATTGGCTCTGGTAAAAATGGGTTTTCAGGGCTTATTTGGA
ATTTTTTTATGCATTTTTGAAAAGTCTACAACATCCTTTTGTCCGTTACT
ATTGTACTCCTTTTTTCTATGAGAACTAGTAAATCTTTATGACGCTCAGT
TGTTCTTATGGTTGTCATGTTTCTATTTCTATAAGTTTTAATAGCCCTAA
TTTGACCCTTAATCGTGCTTAGTCTGCTTAGAACTCAGTCATTCCAGGTT
CAGCAATGTCCTTATTTTCGTTTTTTTTAGCCTCATTGTTTTCGTAAAAT
TGTTCTTACAATATAAAGAATTTAGTTGGAGTAGGGGGAGTAAATCAAAT
TCTTTCATCTATTCTTTTAATTGGAGTATGTCAGAATCTTTTAGTCTTAG
GTTTTGACAAAAACAAACATGTTCCTATTAAATTTATTACCAACAAACGT
AGGTATGATATTACAAATTGCGAACAAAATACACGTTTTTTATAAGAACA
AACTATGTAAGAACATGAGGCTTCGATGATCAAAATGTTAAGAACAAGTT
AAGAACATTGTAGGGCTTCGCGGACTCGAAAACAGCCAATTTATTAGGAA
AATAAACAAAAATTACATGAAAAATGGGGAAAATAAGAACATTTCTAGAC
TTGAAACTCAAAAAGTTAAGAACATCCGAAGGCTTCAGAAATTTTGGATG
AACGCGTCATCTCTTCTCTCACCTTCATCTTGTGTTTCTCTTCTCTTGTT
CAGGGTTCGTATCCTTCAGACTTGCTGGCCAACCTTTTGTGTCCATGTTG
CTCATTGGTTCAAGATGCAAGGGTAACATGTTTTTTTCTTTTCTGTTCAT
TTTTTCTACTATCTGGAACGAAAGAAGAGGAACAAATTGTTTTCTTTCCT
AGACTTTTGCAACTGCTCAGATAAATTCCCAACTATTTTTATTAGAATAT
GAGGCCCACTGGAAAAGGTTTTTTTATTCAACGCTGTAATAGACCTTTTC
ATAAATTACGTTAGGAACATCACTTGCCTCGTTTTGAAATTATTGTCAAG
GTGATTAACTCTCAGCGAATTTTATTAAAACTACCTTTATTCATAAAAAA
AACATTTAATGTCTCAAGGGACATAATCACCATGTCAATTGTTTGAAAAC
GAGGCAAGTGATGTTTATGACGTAATTTATGAAACGGTCTATTGTCATCA
CATTCCAATCCTCCTAACTATTTCTCAAAATGTTGCATTTTTTAGGAGAT
CGAAGCCCACGCTACACCACCCCCTGCAGTCAAAATAATTCGTCAATAA Coding sequence (CDS) from alignment at sc0000089_pilon:608797..612845- >XLOC_044070 ID=XLOC_044070|Name=XLOC_044070|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=666bp|location=Sequence derived from alignment at sc0000089_pilon:608797..612845- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAATTTCAATTCAATTTGTTGGACTGTTCAGAAGATTTAGGGAC
TTGCTCACGGACCTTTTTATGCCCGTGCGTGACGGCGGGAGAGAACGCCA
GGGCCGTTGACAAATCTTGCTTTTTGTTTGGTTTGATGTCAGTTCTTCCA
CTGTGTATGTTTACGAATGGTCACGTGAGAAAACTCATTCGACACAAATA
TAACATCAAGATGGCTGAATTTCAATTCAATTTGTTGGACTGTTCAGAAG
ATTTAGGGACTTGCTCACGGACCTTTTTATGCCCGTGCGTGACGGCGGGA
GAGAACGCCAGGGCCGTTGACAAATCTTGCTTTTTGTTTGGTTTGATGTC
AGTTCTTCCACTGTGTATGTTTACGAATGGTCACGTGAGAAAACTCATTC
GACACAAATATAACATCAAGGGTTCGTATCCTTCAGACTTGCTGGCCAAC
CTTTTGTGTCCATGTTGCTCATTGGTTCAAGATGCAAGGGGTTCGTATCC
TTCAGACTTGCTGGCCAACCTTTTGTGTCCATGTTGCTCATTGGTTCAAG
ATGCAAGGGAGATCGAAGCCCACGCTACACCACCCCCTGCAGTCAAAATA
ATTCGTCAATAAGAGATCGAAGCCCACGCTACACCACCCCCTGCAGTCAA
AATAATTCGTCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:608797..612845 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 280-333:55 |
| Aaloc | 211-279:547 |
| Aaloc | 1-210:4050 |
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