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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:684981..687386- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044067 ID=XLOC_044067|Name=XLOC_044067|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2406bp|location=Sequence derived from alignment at sc0000089_pilon:684981..687386- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAGCCCATCATCAGAGTTTGAAACTCCTGTAAAGAAGCATAAAAG
TAAGAAGCCCAAAAAGGACAAAAAAAAGAAGAAAAGTAAGCAACGCAGTA
AAGATAAACATTCTTCAGAAAGCTCGAGTGCTAATTTCATTCAACCAACC
TATGAAAGTCTATCCTCAGATGGTGAACTTGGAGAGACATTTGATGATTT
TGAACAATACAAAAGGAACAAACAGATGAGACATGATTCCTTTGATTCAT
CCCCTCCGCAACCAAAAAAGAAGAAAAAGGATAAGAAGTCCCATAAATCT
AAAAGGAAAAACTCAGCAAATAATGTAGACTTTGATAATTCCTCATCAAA
ATATGCTGGTGGATTCTCATCTTCATCGTCATGGAATAATTCAAAGAGTT
TAAATCGTAAAAATTCTTTAGGCTCACCAGAAGAATTTGGAGGGTATCCA
AAGGAAACCTACAAGGAAGAATACTATTCTCGCTCTCCAAAGCATCGTTT
TAGAAACGACAGCCCAAGTAGGAGTCGCCATAGAAGTTCGCGTGATAATT
CTGTGTCGCCCTATCTCAAGAGGAATGCTTCGCCTTATGAGGGTGGATCA
CCCATATCTATAAACTCTAAATCTCCAAATTACTCTCCTTACAACAGACG
CTCGCCTAGAAAGCGATCACCATCACCTAGTTATCGAAAGAGATCAAGTA
GTCATCGTAAACATTCAAGTCACACTTCTCACAGCAGCTCCCACAAAAAG
CACATCAAAGACATTTCCAGGTCACCCTCATTTTCTCCTAGTCGATCTCC
AAAGCTTCCGATGCAAAGGAAAAGGACACACACTGGATCCTCAAAGCAAC
ATCGACATGAAAGAGACAATTTAGCTAATAATTCATTTAATTCTGGTACA
AACTTTCTTCAAAGGAATAGTAGTAATACCACCGGGAGTTTCCCAATGAA
CAATAACAATGGTGCTGGTTTACCTCCTCCCATGCAACAGATGAGTATGA
GTCAATTCTTTTTACGTCAAGCTCAGCAGGCTCAACAACAAGTTCAACAG
CAACATCAAAATCTAATCAGAAATAATAATATCCCTCCACAGGGACCTGT
TATGAGCAAAAACAACCAAGCAAACAATATGCCTCCTCTGGATAAAAATC
TAACTGTGAAAAGTCTACCACCTTCAACACTCCAGACAGAGATAAAATCA
TCTAAACAACCACCGCCACCCTTAATCAGTCCACCTCCGAAACCTGCACT
ACCACCACCTCCACCACAAACGTCACTTCCACCTCCGCCACCACCAGATG
AAATGAAAGCACGCGGGGATGAGGCACCGCCCCTCCCACCCCTTCCGTTA
CCACCAGTTATTCCAGAGATTAGTGATATTTCTCCTGAACCTATCAGCAA
CAGTGATAATGATTTTACAAACAAAGACATTGAGAAACCAGTAAATGGGA
GTCAATCAAATTCTGTTGAAAGCAGCAGGCCTGTTTCCAGAAATTCCTTT
GATAGATCGGTAACAAATTCACCAGATGCAGACACAGAATGGGGAGAGCG
ATGTGTTGATATGTTTGAAATCATGAAAATTGTTGGGGAGGGAACTTATG
GGCAGGTCTATAAGGCTAAAGATAAGATTACAGGTTGGTCTTACTTCAAA
ATCATTTGAAATTGAGAAATTTAAGCTTATAGGTAAACTGCATTTATAAG
CAACCACTTAAGTTAAGTTCATTTCATTTTAAGCTGCAGGAAAATGTATT
ATTTCATTTACATGTGGATACTTCACCAATCATGCAATAATTTATCTCAG
CTGTCAAATAATATCATTATTGGCAAATTCATTCTTCAATGATAGTAGAT
TTTTTCAACATTTCGTGATATACTATGAGTTAGTCTAATATGGACCACCC
TATTTATTCTGCCTCCCTTTTAGCAACAAAAATAATTAGAAGGAAGAAAT
CGCTAAAAATTAGAATAGACTCCGCAAATTTAAGTCACAATCAGTGATTC
CCCCTTTTTCATCTCTCCTCCTGTGAAAGGGTGATGAAATTAGCAGAGGG
TGGTCAATCTTAGATAGAGTCACACAGAGTCACAGTATACTTATCACAAG
ATGAGAAATTCGAAATGACCATGCCAGTTTAGAAGAAGTCTCTTACAACC
TTGACTTGCTTCTAAGCTTTTGGTTTCAATATTTTAATAGTATGGCTTTT
ATTGGAACGACATATTTGAGAGAACAGGAAATGAATTATTCAGTAACATA
GCCATACTTAGTCATACCATAGCCATCACTGAAAATGTCTTAAATGTTGA
TGAATTAACTTTAAATGAAATGTCAAATTATTGTCTTTCTGGATTCAACT
AATATCCAATTTTTTTGATTTTCTTAGGTTTTAAATTAACTCGCCAATTA
ATCTAA Coding sequence (CDS) from alignment at sc0000089_pilon:684981..687386- >XLOC_044067 ID=XLOC_044067|Name=XLOC_044067|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3324bp|location=Sequence derived from alignment at sc0000089_pilon:684981..687386- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAGCCCATCATCAGAGTTTGAAACTCCTGTAAAGAAGCATAAAAG
TAAGAAGCCCAAAAAGGACAAAAAAAAGAAGAAAAGTAAGCAACGCAGTA
AAGATAAACATTCTTCAGAAAGCTCGAGTGCTAATTTCATTCAACCAACC
TATGAAAGTCTATCCTCAGATGGTGAACTTGGAGAGACATTTGATGATTT
TGAACAATACAAAAGGAACAAACAGATGAGACATGATTCCTTTGATTCAT
CCCCTCCGCAACCAAAAAAGAAGAAAAAGGATAAGAAGTCCCATAAATCT
AAAAGGAAAAACTCAGCAAATAATGTAGACTTTGATAATTCCTCATCAAA
ATATGCTGGTGGATTCTCATCTTCATCGTCATGGAATAATTCAAAGAGTT
TAAATCGTAAAAATTCTTTAGGCTCACCAGAAGAATTTGGAGGGTATCCA
AAGGAAACCTACAAGGAAGAATACTATTCTCGCTCTCCAAAGCATCGTTT
TAGAAACGACAGCCCAAGTAGGAGTCGCCATAGAAGTTCGCGTGATAATT
CTGTGTCGCCCTATCTCAAGAGGAATGCTTCGCCTTATGAGGGTGGATCA
CCCATATCTATAAACTCTAAATCTCCAAATTACTCTCCTTACAACAGACG
CTCGCCTAGAAAGCGATCACCATCACCTAGTTATCGAAAGAGATCAAGTA
GTCATCGTAAACATTCAAGTCACACTTCTCACAGCAGCTCCCACAAAAAG
CACATCAAAGACATTTCCAGGTCACCCTCATTTTCTCCTAGTCGATCTCC
AAAGCTTCCGATGCAAAGGAAAAGGACACACACTGGATCCTCAAAGCAAC
ATCGACATGAAAGAGACAATTTAGCTAATAATTCATTTAATTCTGGTACA
AACTTTCTTCAAAGGAATAGTAGTAATACCACCGGGAGTTTCCCAATGAA
CAATAACAATGGTGCTGGTTTACCTCCTCCCATGCAACAGATGAGTATGA
GTCAATTCTTTTTACGTCAAGCTCAGCAGGCTCAACAACAAGTTCAACAG
CAACATCAAAATCTAATCAGAAATAATAATATCCCTCCACAGGGACCTGT
TATGAGCAAAAACAACCAAGCAAACAATATGCCTCCTCTGGATAAAAATC
TAACTGTGAAAAGTCTACCACCTTCAACACTCCAGACAGAGATAAAATCA
TCTAAACAACCACCGCCACCCTTAATCAGTCCACCTCCGAAACCTGCACT
ACCACCACCTCCACCACAAACGTCACTTCCACCTCCGCCACCACCAGATG
AAATGAAAGCACGCGGGGATGAGGCACCGCCCCTCCCACCCCTTCCGTTA
CCACCAGTTATTCCAGAGATTAGTGATATTTCTCCTGAACCTATCAGCAA
CAGTGATAATGATTTTACAAACAAAGACATTGAGAAACCAGTAAATGGGA
GTCAATCAAATTCTGTTGAAAGCAGCAGGCCTGTTTCCAGAAATTCCTTT
GATAGATCGGTAACAAATTCACCAGATGCAGACACAGAATGGGGAGAGCG
ATGTGTTGATATGTTTGAAATCATGAAAATTGTTGGGGAGGGAACTTATG
GGCAGGTCTATAAGGCTAAAGATAAGATTACAGATGGGAAGCCCATCATC
AGAGTTTGAAACTCCTGTAAAGAAGCATAAAAGTAAGAAGCCCAAAAAGG
ACAAAAAAAAGAAGAAAAGTAAGCAACGCAGTAAAGATAAACATTCTTCA
GAAAGCTCGAGTGCTAATTTCATTCAACCAACCTATGAAAGTCTATCCTC
AGATGGTGAACTTGGAGAGACATTTGATGATTTTGAACAATACAAAAGGA
ACAAACAGATGAGACATGATTCCTTTGATTCATCCCCTCCGCAACCAAAA
AAGAAGAAAAAGGATAAGAAGTCCCATAAATCTAAAAGGAAAAACTCAGC
AAATAATGTAGACTTTGATAATTCCTCATCAAAATATGCTGGTGGATTCT
CATCTTCATCGTCATGGAATAATTCAAAGAGTTTAAATCGTAAAAATTCT
TTAGGCTCACCAGAAGAATTTGGAGGGTATCCAAAGGAAACCTACAAGGA
AGAATACTATTCTCGCTCTCCAAAGCATCGTTTTAGAAACGACAGCCCAA
GTAGGAGTCGCCATAGAAGTTCGCGTGATAATTCTGTGTCGCCCTATCTC
AAGAGGAATGCTTCGCCTTATGAGGGTGGATCACCCATATCTATAAACTC
TAAATCTCCAAATTACTCTCCTTACAACAGACGCTCGCCTAGAAAGCGAT
CACCATCACCTAGTTATCGAAAGAGATCAAGTAGTCATCGTAAACATTCA
AGTCACACTTCTCACAGCAGCTCCCACAAAAAGCACATCAAAGACATTTC
CAGGTCACCCTCATTTTCTCCTAGTCGATCTCCAAAGCTTCCGATGCAAA
GGAAAAGGACACACACTGGATCCTCAAAGCAACATCGACATGAAAGAGAC
AATTTAGCTAATAATTCATTTAATTCTGGTACAAACTTTCTTCAAAGGAA
TAGTAGTAATACCACCGGGAGTTTCCCAATGAACAATAACAATGGTGCTG
GTTTACCTCCTCCCATGCAACAGATGAGTATGAGTCAATTCTTTTTACGT
CAAGCTCAGCAGGCTCAACAACAAGTTCAACAGCAACATCAAAATCTAAT
CAGAAATAATAATATCCCTCCACAGGGACCTGTTATGAGCAAAAACAACC
AAGCAAACAATATGCCTCCTCTGGATAAAAATCTAACTGTGAAAAGTCTA
CCACCTTCAACACTCCAGACAGAGATAAAATCATCTAAACAACCACCGCC
ACCCTTAATCAGTCCACCTCCGAAACCTGCACTACCACCACCTCCACCAC
AAACGTCACTTCCACCTCCGCCACCACCAGATGAAATGAAAGCACGCGGG
GATGAGGCACCGCCCCTCCCACCCCTTCCGTTACCACCAGTTATTCCAGA
GATTAGTGATATTTCTCCTGAACCTATCAGCAACAGTGATAATGATTTTA
CAAACAAAGACATTGAGAAACCAGTAAATGGGAGTCAATCAAATTCTGTT
GAAAGCAGCAGGCCTGTTTCCAGAAATTCCTTTGATAGATCGGTAACAAA
TTCACCAGATGCAGACACAGAATGGGGAGAGCGATGTGTTGATATGTTTG
AAATCATGAAAATTGTTGGGGAGGGAACTTATGGGCAGGTCTATAAGGCT
AAAGATAAGATTACAGGTTTTAAATTAACTCGCCAATTAATCTAAGTTTT
AAATTAACTCGCCAATTAATCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:684981..687386 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1636-1662:28 |
| Aaloc | 1-1632:2407 |
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