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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:711621..716251- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044065 ID=XLOC_044065|Name=XLOC_044065|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4631bp|location=Sequence derived from alignment at sc0000089_pilon:711621..716251- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTTAGAAATCAAGAAAGTTTTAATCAGTGATAAAGTGGATTCTAG
TTGTCAAACAGTGCTTGAAGAAAACAGCATTGAAGTGGATTACAAACCTG
GCCTGTCAAAAGATGAACTCAAAGCTATCATCAAGGTGCCACATTCATTT
CCTGGACAATCCAATGATTGATGAAAATCTTTATGATGGCCTTCTTGAAT
ACCAATACTTGGATTTCTGCAACTATCCACAAAAAGATAGATGATAGATA
AAGATGTGAGATTTTTCTAATTTTGGAAAACAATTCAGAGGATAATATTA
TGGTTTTAATATTTTATTTTTAGGATTACGACGGTCTTATAGTCAGATCA
GCCACCAAAGTGACGCAAGATGTTTATGATTGTGCTGAAAGGTTGAAGAT
TATTGGCAGAGCTGGTACTGGTGTGGATAATATTGACCAAATTTCTGCGT
CAGCAAAAGGAGTTCTTGTCATGAAGTAAGAAGCTGTAAAGATTTCTTAA
TCAATTACTTGCATGGTCTTTTAGAAAAGGGATTTTATTTAAATTTTAGA
TTTATTAGTTTGGAGTGAAGAAAAAAAGCAAAATTGATTTTAAATAACAA
ACGGTTTTCTTTTTTCAGCACACCGGGTGGAAATACACTGAGTGCAGCAG
AACACACCTGCGCCATGATCTCTGCTCTTGCAAGGTATACCTTATTTGTC
AAATATTTTAGCTCATTTTGTTTAACTGACCAAAAAACGAAAAAAACGAA
AGCAGCATGGAGCACAGAGAAAGTCTAAGTCTGATCCATACATACCATAC
CTACCTGCCTACACATTACGAAGTTGACTGACCAGGTATGAACGATAGAA
AAATAAGATCATTTCCTTTTTACATTATCTTTTTTACATTAATTACCTTG
AGTTTAAATCATTGAGAGGGATTAACTAAAGTCTTTACATCTGTTGAGAA
GGCTGTTTTTCGAATTCAAATCCTACTGAGAAAGTCACGACCTGATCGCA
ACACTGTTCTAGAGAGAAACTCAATAATCGTGCTTATCGCTATCTCTTAT
CTTCTTTCAGACACATTGGTCAAGGTTATGCTTCAATGTTGGAAGGAAAA
TGGGAGAGATCTAAGGTAATCTATACAGAAGCGTGAAAATTAGTATATGT
TATCACATGATAATGAGTGAAATTCGGGAATAATTGTACGAGTGATTGCA
CGAGGGATTTTTTTGTTTTTAATTTTCTGAGTCCTTTTCTTATATTGTTG
TTCATAGTTTTTCTTTCTCACAAAAAAAACGTTCGCGGCATCGAAGAGTG
TGATTAACGGTTAATTGCTCTCTTTGAAGGCACGCCAAATGAGAAAAAAT
ACAGTCGGTAGTCCATCGTGCGATTATACATGATAAACATCGACAACGAC
ACTTTAGGATTTACGCTCGCGTTTACTTTGGCTGAATGACGTCAAATTTC
GCGAAGGTAACCCGGAACCCCTTTCAAGGAGCTTTAAGGACAAGGGCTTT
ATTGTACACCATCCTATTTTTGTAGAATTCATATACCAGCTCTTTTAATC
GTTATTTTGATAGTTTATGGGATGTGAACTCGGTGGAAAAACACTGGCTA
TTATCGGGCTTGGTCGGATCGGACGTGAAGTGGCTTCAAGAATGCAATCT
TACGGAATGAAGGTCAAAATTATGAATTAAACTCTCGCTAATTCCAACTC
GAACAGGATTATAAAGTTTTTTACTGGCTTTTCCCCATGACAGAAGTTGA
GAATGATAGAATGATTTGAATAAAAGAAGTTCGAATTAGCGAGGGTCAAC
TGTATCGTGCATTCTGTATCAAATTTCCCATAATGCTTAACCTTAATAAT
GTTTTAGTGAAATAGTTACCTTTTTAACTAAATGAACTGTCCCTTTCCTG
TCCTTTGAACGGACATTCTTTTTCTTACAAATCTAAAGCAGCATCTCTTA
TCTTTTCTCCAAACCTAAAACCATCGAATTTATTTCAACCTTTCTCGATT
TGGTCGTTCACAGACGGTGGGTTACGATCCTTTGGTTTCACCAGAAGAAG
CTGCTACATTTGGTGTGGAGTATTTACAATTAAAAAATATTTGGCCCATC
GCTGACTTTGTCACAGTTCATGTACCTCTCATCAAGCCAACACGTGGTAT
GTTCAACTTCCTTCCAATGAAAGGTTTCCTTCTTGTTGCCTGCATCTGTG
TGAGTGATATCGTTGGAGATTTTCAAAAAATCTGAATTTTTAGATCTTGC
TTTTAGTTAAACAAAATGCTAGGGGACTACAAAATGGTAGTGACGTTTAT
CTCTGAATGTACAGTTGATTCTCAATAACTCGAACCTCTTAATCTCGAAT
GTCTCCTTAACTCGAACAAGTTTTATAGTCCCTTCAGTTAACAATGTCAT
TTAAACTTTATTCGAAAAGATTTGCGTTCCCTGTTTGTGTTTCAGCTATG
GAGACTCCAATTTCAATTTCATCTTTTTCTTTCCATTTGAAGGGATGATC
AACGCATCGGTGTTCGAAGTTTGCAAACCCTCCATGAAAGTGATCAATGT
TGCACGTGGTGGAATCATTGATGAAAAGGATCTCCTCAACGCATTGAATG
CTGGCAAATGTGGGGGAGCAGCACTTGATGTCTTCGAAACTGAACCACCT
AAAGGTTGATTTAAATTCCTGATCATTGTTATGTGCGGTGAAGATCTTCT
ACAAAGAAATCTACACAATTTAGAAAGTGCTCATTTAAGTCACTCCTCAA
ATTCGGCTATATATCAATAGAGTTTCAATATGAAATTTTTTACCATCTTG
TTTTCCATTTGGAAGATTAACCTAGGATCAAAGAAGGAATCTTCTGGCTG
AGTTTCATTTTTCATTTGTTTGTCCCCTAATGACATTCGTCGAAATTTAG
TTTTTTTAACTTTTTCTCTTCGCAGAGGGCAGTGTCAGCATGGAGTTAGT
GAAACATCCTAAGACCCTATGCACACCACATTTGGGAGCGAGTACGACAG
AAGCACAGTTGCGCGTTGCTAAGGAGATTGCAGAACAATTTGTGGATGCG
GTCAATGGGAAACCCATGGTCGGCTTGGTGAGTGCTTCTTACTCGACTCT
TTTCAGGAACGATTTCTTTGGTAGGTCCCGAGTAATCTAGGACTTGTTTT
AATGGGCTCCGCGTCCTACTCGGCCATATAAAAGTGAAGATGGTTAGTCT
GAATCGCAGACCTCTATAGATATACTTCCTATAAGAAACTTTTATCGCTA
GAGGATGAGCAGAAGCTTAGAAGATGGTCATCCCTAGTACTATAGCCTAT
ATAGAAGACTGCTTCTGAAGGCCTTAGAATATTGATTGATTTAAAGAACG
AGCATTTGTTTCATTTGAACCTCGTTGACTTTATTGCCATCATGATTCCC
ACGAATACTGTTCATTTTAATCGAATAGCAAAGAACCAATGACATCGATC
TCTCGAAAGAATTTGAAACTCGCGTTTCTACAGGTTTAACCCCCTTGTTT
ATCATTGACAAAAACCGCAATTCTACAATTTCAAAATACCCATTACACCA
ATCCGTTTATTTCAAGGTCAACGCACCAGCTTTATCGCAATTGGCCAACC
CTTTGTACGCACCTTGGGTGGAACTAGCTCAGAAACTCGGCTCCCTAGCC
TCCAATCTCAGTGATTCAGCAAATTTGACTTTGCATTTGGATGGTGATGA
ATTGAAACCAGCCACCAGGCTATTGAACACTGCGCTTTGTTTTGGACTTG
CTAAAGCTAAAGGATTGGACTGCAATATGATCAGTGCTGTCAGTCTTCTC
AAAGAGAAAAACATAGTGGTAAGTCTATACTACATTCACTATGTCTGCGA
TTTGTCACTTGACAAGAATTATCTACCGCGGTACGGCAAAAAAAAAACGT
CACCAATTTTAATTGTAGCGCTGCCAGATTATCGAAATGACCGGGAAAAA
CTATTAAAGCATATTCAAAAGTTTCCTGGAAGTTTTGACTTAAAAGAGCT
ATTTTTCTAAAAGATATGCCTTTATATATATTTTAGGAATCGAGTACGGA
ATGTTTTATCTCAGACAAAATTATGCCAAAATATCCCTCGTAGAATGTCT
AAATAATACCCGATTACTAAAAGATTTTAGACAACACTACGATAAAGTTT
GTCAATAAAAATCTAGCTTTTGCTTTATTGATCAATGTAAAATTTGAAAA
TGCTCTTGGCCTGAACCATAAAGCTCACCTCAAAAACAGGGGTCGTGATC
ATACCCTTCGTAAATGTGACCTTGATGATCATTTCAACATCTTCTTCACT
TTAGGTTGTCAACTCACCAACACCCAAAGATCTCGCTTACTCTGCTCTCT
CTGTTTCAACAAGCGAAAACTCATGGCTCGTCACCGGCTTTCTGAGCAGA
GGAAGACCCTGCATTGGAACTCTCCAAAATACTGAGCTCGCTAACCCAGT
CGTTTTAGAGAGCGGTTTGGTCTATGCAGTTTCCGACTCATCAGAGAAAG
AACTTCTGCTGACTTCAGCAGAAATGGGCGTTTCTTCAGTGAGTCTATCA
CGGAATGGAAACCGGGTGGTTTTTGTCGCAAGTGTCGCAGAGAAACCGGC
CAACGAACTATTCAAATTCATACAATTCTAG Coding sequence (CDS) from alignment at sc0000089_pilon:711621..716251- >XLOC_044065 ID=XLOC_044065|Name=XLOC_044065|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3066bp|location=Sequence derived from alignment at sc0000089_pilon:711621..716251- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTTAGAAATCAAGAAAGTTTTAATCAGTGATAAAGTGGATTCTAG
TTGTCAAACAGTGCTTGAAGAAAACAGCATTGAAGTGGATTACAAACCTG
GCCTGTCAAAAGATGAACTCAAAGCTATCATCAAGATGGCTTTAGAAATC
AAGAAAGTTTTAATCAGTGATAAAGTGGATTCTAGTTGTCAAACAGTGCT
TGAAGAAAACAGCATTGAAGTGGATTACAAACCTGGCCTGTCAAAAGATG
AACTCAAAGCTATCATCAAGGATTACGACGGTCTTATAGTCAGATCAGCC
ACCAAAGTGACGCAAGATGTTTATGATTGTGCTGAAAGGTTGAAGATTAT
TGGCAGAGCTGGTACTGGTGTGGATAATATTGACCAAATTTCTGCGTCAG
CAAAAGGAGTTCTTGTCATGAAGATTACGACGGTCTTATAGTCAGATCAG
CCACCAAAGTGACGCAAGATGTTTATGATTGTGCTGAAAGGTTGAAGATT
ATTGGCAGAGCTGGTACTGGTGTGGATAATATTGACCAAATTTCTGCGTC
AGCAAAAGGAGTTCTTGTCATGAACACACCGGGTGGAAATACACTGAGTG
CAGCAGAACACACCTGCGCCATGATCTCTGCTCTTGCAAGCACACCGGGT
GGAAATACACTGAGTGCAGCAGAACACACCTGCGCCATGATCTCTGCTCT
TGCAAGACACATTGGTCAAGGTTATGCTTCAATGTTGGAAGGAAAATGGG
AGAGATCTAAGACACATTGGTCAAGGTTATGCTTCAATGTTGGAAGGAAA
ATGGGAGAGATCTAAGTTTATGGGATGTGAACTCGGTGGAAAAACACTGG
CTATTATCGGGCTTGGTCGGATCGGACGTGAAGTGGCTTCAAGAATGCAA
TCTTACGGAATGAAGTTTATGGGATGTGAACTCGGTGGAAAAACACTGGC
TATTATCGGGCTTGGTCGGATCGGACGTGAAGTGGCTTCAAGAATGCAAT
CTTACGGAATGAAGACGGTGGGTTACGATCCTTTGGTTTCACCAGAAGAA
GCTGCTACATTTGGTGTGGAGTATTTACAATTAAAAAATATTTGGCCCAT
CGCTGACTTTGTCACAGTTCATGTACCTCTCATCAAGCCAACACGTGACG
GTGGGTTACGATCCTTTGGTTTCACCAGAAGAAGCTGCTACATTTGGTGT
GGAGTATTTACAATTAAAAAATATTTGGCCCATCGCTGACTTTGTCACAG
TTCATGTACCTCTCATCAAGCCAACACGTGGGATGATCAACGCATCGGTG
TTCGAAGTTTGCAAACCCTCCATGAAAGTGATCAATGTTGCACGTGGTGG
AATCATTGATGAAAAGGATCTCCTCAACGCATTGAATGCTGGCAAATGTG
GGGGAGCAGCACTTGATGTCTTCGAAACTGAACCACCTAAAGGGATGATC
AACGCATCGGTGTTCGAAGTTTGCAAACCCTCCATGAAAGTGATCAATGT
TGCACGTGGTGGAATCATTGATGAAAAGGATCTCCTCAACGCATTGAATG
CTGGCAAATGTGGGGGAGCAGCACTTGATGTCTTCGAAACTGAACCACCT
AAAGAGGGCAGTGTCAGCATGGAGTTAGTGAAACATCCTAAGACCCTATG
CACACCACATTTGGGAGCGAGTACGACAGAAGCACAGTTGCGCGTTGCTA
AGGAGATTGCAGAACAATTTGTGGATGCGGTCAATGGGAAACCCATGGTC
GGCTTGAGGGCAGTGTCAGCATGGAGTTAGTGAAACATCCTAAGACCCTA
TGCACACCACATTTGGGAGCGAGTACGACAGAAGCACAGTTGCGCGTTGC
TAAGGAGATTGCAGAACAATTTGTGGATGCGGTCAATGGGAAACCCATGG
TCGGCTTGGTCAACGCACCAGCTTTATCGCAATTGGCCAACCCTTTGTAC
GCACCTTGGGTGGAACTAGCTCAGAAACTCGGCTCCCTAGCCTCCAATCT
CAGTGATTCAGCAAATTTGACTTTGCATTTGGATGGTGATGAATTGAAAC
CAGCCACCAGGCTATTGAACACTGCGCTTTGTTTTGGACTTGCTAAAGCT
AAAGGATTGGACTGCAATATGATCAGTGCTGTCAGTCTTCTCAAAGAGAA
AAACATAGTGGTCAACGCACCAGCTTTATCGCAATTGGCCAACCCTTTGT
ACGCACCTTGGGTGGAACTAGCTCAGAAACTCGGCTCCCTAGCCTCCAAT
CTCAGTGATTCAGCAAATTTGACTTTGCATTTGGATGGTGATGAATTGAA
ACCAGCCACCAGGCTATTGAACACTGCGCTTTGTTTTGGACTTGCTAAAG
CTAAAGGATTGGACTGCAATATGATCAGTGCTGTCAGTCTTCTCAAAGAG
AAAAACATAGTGGTTGTCAACTCACCAACACCCAAAGATCTCGCTTACTC
TGCTCTCTCTGTTTCAACAAGCGAAAACTCATGGCTCGTCACCGGCTTTC
TGAGCAGAGGAAGACCCTGCATTGGAACTCTCCAAAATACTGAGCTCGCT
AACCCAGTCGTTTTAGAGAGCGGTTTGGTCTATGCAGTTTCCGACTCATC
AGAGAAAGAACTTCTGCTGACTTCAGCAGAAATGGGCGTTTCTTCAGTGA
GTCTATCACGGAATGGAAACCGGGTGGTTTTTGTCGCAAGTGTCGCAGAG
AAACCGGCCAACGAACTATTCAAATTCATACAATTCTAGGTTGTCAACTC
ACCAACACCCAAAGATCTCGCTTACTCTGCTCTCTCTGTTTCAACAAGCG
AAAACTCATGGCTCGTCACCGGCTTTCTGAGCAGAGGAAGACCCTGCATT
GGAACTCTCCAAAATACTGAGCTCGCTAACCCAGTCGTTTTAGAGAGCGG
TTTGGTCTATGCAGTTTCCGACTCATCAGAGAAAGAACTTCTGCTGACTT
CAGCAGAAATGGGCGTTTCTTCAGTGAGTCTATCACGGAATGGAAACCGG
GTGGTTTTTGTCGCAAGTGTCGCAGAGAAACCGGCCAACGAACTATTCAA
ATTCATACAATTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:711621..716251 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1207-1533:328 |
| Aaloc | 955-1206:1066 |
| Aaloc | 805-954:1705 |
| Aaloc | 643-801:2138 |
| Aaloc | 508-639:2619 |
| Aaloc | 409-507:3069 |
| Aaloc | 355-408:3571 |
| Aaloc | 289-351:4013 |
| Aaloc | 136-285:4309 |
| Aaloc | 1-135:4632 |
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