|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:811354..813389- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044061 ID=XLOC_044061|Name=XLOC_044061|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2036bp|location=Sequence derived from alignment at sc0000089_pilon:811354..813389- (Clytia hemisphaerica_ch_hm2_pilon)
AAAACGAAATTAGATCGTGAAATCAAACAGTTAAAAGTTCGCTTTACCAG
ACCGGATGGACAGAAAAGGGAATATCGTGTGAACAAACTCGTCGACAGTG
CAGAACGTTTATCTCTGGATATGGATTCGCCAGATGGAGGAAAGCGAAAG
ACCACAATTCAACAGTACTTCAAAAATCAATACAAATGCAACTTAAAATA
TCCTTCGTTACCATGCGCTCATGTTGGTCCTCCCAAGGGAACAATTTACC
TTCCAATCGAGTTTTTGGAGATCAAGAAACAACTAGCTCCAACCACCAAA
AAGTTATCCGAGGACGAAACTGCCGAAATGATAAAACAAACAGCTCTGCA
ACCCAACATCAGAAAACAACGTATCCAAAGAAACTTGAGAGAACTGAAAA
ACTCTTTTAAAGATGACCCATACGCTAAAGCCTTCGGTTTAGAGATCAAC
GACAAAATGGCGGAAATGCGTGGACGAGTCTTGGATGCTCCCTCCATCAA
GTACAAGAAAGGTAGCAAAGTCAGCGAGTGTCGACACACGGGTGGTAAAT
GGAATATGACCAGCCAAGATCGAGTCGATCCCTTGAAATTTCTAGAAACC
GTATCCCTCGGCAGATGGGGAGTTTTAGATCTTGCCGGACTTCCACCGCA
ACAAAAGCAAGCTTTCGTGGATGCTGTGGCTATTGAAGCAGGACAACGAG
GTCATCACATCGACTATCCGATCTACGATAAAGCTGACGTTAACAACCTC
GAAGATGTCGAGAAAAGCTTCAAACGGCTTTGCATGCATATTCAACAACA
GTGCAACGGAAAACCCCAGCTTGTCCTCGTCATTGCCCCCTTCAAAGGAA
ACATCTATCCATGCATCAAATACATCGGTGACGCAGTAATGAATGTTCCA
ACGCAATTCGTCCTCAAGAAAAACGTCCTCGGTAAGCCAAGACAAGGACC
CAGCGGTCAAACCATCCACAACTTGTGTTTGAAGTTGAACGCAAAAACAG
GTGGTACCAATCACGGTTTGTTCGTTCGACCTCCAGTGATGAAGAAACCA
ATCATTATCCTAGGTGCTGACGTCACTCATTCAGCGCCCAGCGAGTTCAA
GAAGCCTTCCATTGCAGCTATGGTGGGATCGTGCAACCCCGAAGCATCGG
AATATTTCTGTGAAGTTCGCGTTCAAAAACAAGGCAAGGTAATGGAGGAG
ATCGAAAAGACAGAGGAGATGGTCAAAAGTCTCCTTCAACGATTCCACGA
GAAGACGCGCGTCAAACCGTTGAAGATCATCTATTATCGAGACGGTGTCA
GTGAAGGACAGTTCATTTCAGTATTGAATCACGAATTGACAGCTATTCGA
AAAGCATGCCTCAGTCTTCATCCTGACTACAAACCTGAAGTCACTTTCTT
TGTCGCACAGAAACGTCACAACACACGATTGTTCCCTTCAGATCCAAAAG
ATGGTTTCGGCAAAGCGAGGAACGTACCTCCTGGAACAGTCATCGATACT
ATGATCACTCATCCCACCGAAACTGACTTTTTCTTGGCATCCCATGAGGG
AATCCAGGTAAGTCATTCTTTGTTAATTTTATAGTTAGTGAGCACTGTGT
ACTCTATTCATCTATTGACTTGCCCAAGGTTTTCTTGTCACTCAAAAGTC
TTTCAGTTGCCAAAAGCTGAGGAAGCTTTTCACAGATAGACATTTTCTTT
TTCTTTTTTTATGAATGAATGGTTTGTTGTATGGATGTTCAATGTTATCT
TTTTCAGGGTACCACCAAACCAACGCACTACCATTTGCTTTGGGACGATA
GCAACTTCTCCAATGACGAACTTCAAAGTCTGACCTACAATCTATGTCAT
CTTTGCTCTCGCTGTGAACGAAGCGTTAGTTACCCAGCACCAACGTACTA
TGCGCATTTGGCAGCCGCCCGTGCTCGTGAACATCACAATGCTCTGTTGC
TTCGTAACCGAAATCGTATTGATTTTATTCCAAAGGAGGACTTGAGAAAA
ATCGAAAAATGTACTTTATTAAATTATTTTATGTAA Coding sequence (CDS) from alignment at sc0000089_pilon:811354..813389- >XLOC_044061 ID=XLOC_044061|Name=XLOC_044061|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3672bp|location=Sequence derived from alignment at sc0000089_pilon:811354..813389- (Clytia hemisphaerica_ch_hm2_pilon)
AAAACGAAATTAGATCGTGAAATCAAACAGTTAAAAGTTCGCTTTACCAG
ACCGGATGGACAGAAAAGGGAATATCGTGTGAACAAACTCGTCGACAGTG
CAGAACGTTTATCTCTGGATATGGATTCGCCAGATGGAGGAAAGCGAAAG
ACCACAATTCAACAGTACTTCAAAAATCAATACAAATGCAACTTAAAATA
TCCTTCGTTACCATGCGCTCATGTTGGTCCTCCCAAGGGAACAATTTACC
TTCCAATCGAGTTTTTGGAGATCAAGAAACAACTAGCTCCAACCACCAAA
AAGTTATCCGAGGACGAAACTGCCGAAATGATAAAACAAACAGCTCTGCA
ACCCAACATCAGAAAACAACGTATCCAAAGAAACTTGAGAGAACTGAAAA
ACTCTTTTAAAGATGACCCATACGCTAAAGCCTTCGGTTTAGAGATCAAC
GACAAAATGGCGGAAATGCGTGGACGAGTCTTGGATGCTCCCTCCATCAA
GTACAAGAAAGGTAGCAAAGTCAGCGAGTGTCGACACACGGGTGGTAAAT
GGAATATGACCAGCCAAGATCGAGTCGATCCCTTGAAATTTCTAGAAACC
GTATCCCTCGGCAGATGGGGAGTTTTAGATCTTGCCGGACTTCCACCGCA
ACAAAAGCAAGCTTTCGTGGATGCTGTGGCTATTGAAGCAGGACAACGAG
GTCATCACATCGACTATCCGATCTACGATAAAGCTGACGTTAACAACCTC
GAAGATGTCGAGAAAAGCTTCAAACGGCTTTGCATGCATATTCAACAACA
GTGCAACGGAAAACCCCAGCTTGTCCTCGTCATTGCCCCCTTCAAAGGAA
ACATCTATCCATGCATCAAATACATCGGTGACGCAGTAATGAATGTTCCA
ACGCAATTCGTCCTCAAGAAAAACGTCCTCGGTAAGCCAAGACAAGGACC
CAGCGGTCAAACCATCCACAACTTGTGTTTGAAGTTGAACGCAAAAACAG
GTGGTACCAATCACGGTTTGTTCGTTCGACCTCCAGTGATGAAGAAACCA
ATCATTATCCTAGGTGCTGACGTCACTCATTCAGCGCCCAGCGAGTTCAA
GAAGCCTTCCATTGCAGCTATGGTGGGATCGTGCAACCCCGAAGCATCGG
AATATTTCTGTGAAGTTCGCGTTCAAAAACAAGGCAAGGTAATGGAGGAG
ATCGAAAAGACAGAGGAGATGGTCAAAAGTCTCCTTCAACGATTCCACGA
GAAGACGCGCGTCAAACCGTTGAAGATCATCTATTATCGAGACGGTGTCA
GTGAAGGACAGTTCATTTCAGTATTGAATCACGAATTGACAGCTATTCGA
AAAGCATGCCTCAGTCTTCATCCTGACTACAAACCTGAAGTCACTTTCTT
TGTCGCACAGAAACGTCACAACACACGATTGTTCCCTTCAGATCCAAAAG
ATGGTTTCGGCAAAGCGAGGAACGTACCTCCTGGAACAGTCATCGATACT
ATGATCACTCATCCCACCGAAACTGACTTTTTCTTGGCATCCCATGAGGG
AATCCAGAAAACGAAATTAGATCGTGAAATCAAACAGTTAAAAGTTCGCT
TTACCAGACCGGATGGACAGAAAAGGGAATATCGTGTGAACAAACTCGTC
GACAGTGCAGAACGTTTATCTCTGGATATGGATTCGCCAGATGGAGGAAA
GCGAAAGACCACAATTCAACAGTACTTCAAAAATCAATACAAATGCAACT
TAAAATATCCTTCGTTACCATGCGCTCATGTTGGTCCTCCCAAGGGAACA
ATTTACCTTCCAATCGAGTTTTTGGAGATCAAGAAACAACTAGCTCCAAC
CACCAAAAAGTTATCCGAGGACGAAACTGCCGAAATGATAAAACAAACAG
CTCTGCAACCCAACATCAGAAAACAACGTATCCAAAGAAACTTGAGAGAA
CTGAAAAACTCTTTTAAAGATGACCCATACGCTAAAGCCTTCGGTTTAGA
GATCAACGACAAAATGGCGGAAATGCGTGGACGAGTCTTGGATGCTCCCT
CCATCAAGTACAAGAAAGGTAGCAAAGTCAGCGAGTGTCGACACACGGGT
GGTAAATGGAATATGACCAGCCAAGATCGAGTCGATCCCTTGAAATTTCT
AGAAACCGTATCCCTCGGCAGATGGGGAGTTTTAGATCTTGCCGGACTTC
CACCGCAACAAAAGCAAGCTTTCGTGGATGCTGTGGCTATTGAAGCAGGA
CAACGAGGTCATCACATCGACTATCCGATCTACGATAAAGCTGACGTTAA
CAACCTCGAAGATGTCGAGAAAAGCTTCAAACGGCTTTGCATGCATATTC
AACAACAGTGCAACGGAAAACCCCAGCTTGTCCTCGTCATTGCCCCCTTC
AAAGGAAACATCTATCCATGCATCAAATACATCGGTGACGCAGTAATGAA
TGTTCCAACGCAATTCGTCCTCAAGAAAAACGTCCTCGGTAAGCCAAGAC
AAGGACCCAGCGGTCAAACCATCCACAACTTGTGTTTGAAGTTGAACGCA
AAAACAGGTGGTACCAATCACGGTTTGTTCGTTCGACCTCCAGTGATGAA
GAAACCAATCATTATCCTAGGTGCTGACGTCACTCATTCAGCGCCCAGCG
AGTTCAAGAAGCCTTCCATTGCAGCTATGGTGGGATCGTGCAACCCCGAA
GCATCGGAATATTTCTGTGAAGTTCGCGTTCAAAAACAAGGCAAGGTAAT
GGAGGAGATCGAAAAGACAGAGGAGATGGTCAAAAGTCTCCTTCAACGAT
TCCACGAGAAGACGCGCGTCAAACCGTTGAAGATCATCTATTATCGAGAC
GGTGTCAGTGAAGGACAGTTCATTTCAGTATTGAATCACGAATTGACAGC
TATTCGAAAAGCATGCCTCAGTCTTCATCCTGACTACAAACCTGAAGTCA
CTTTCTTTGTCGCACAGAAACGTCACAACACACGATTGTTCCCTTCAGAT
CCAAAAGATGGTTTCGGCAAAGCGAGGAACGTACCTCCTGGAACAGTCAT
CGATACTATGATCACTCATCCCACCGAAACTGACTTTTTCTTGGCATCCC
ATGAGGGAATCCAGGGTACCACCAAACCAACGCACTACCATTTGCTTTGG
GACGATAGCAACTTCTCCAATGACGAACTTCAAAGTCTGACCTACAATCT
ATGTCATCTTTGCTCTCGCTGTGAACGAAGCGTTAGTTACCCAGCACCAA
CGTACTATGCGCATTTGGCAGCCGCCCGTGCTCGTGAACATCACAATGCT
CTGTTGCTTCGTAACCGAAATCGTATTGATTTTATTCCAAAGGAGGACTT
GAGAAAAATCGAAAAATGTACTTTATTAAATTATTTTATGTAAGGTACCA
CCAAACCAACGCACTACCATTTGCTTTGGGACGATAGCAACTTCTCCAAT
GACGAACTTCAAAGTCTGACCTACAATCTATGTCATCTTTGCTCTCGCTG
TGAACGAAGCGTTAGTTACCCAGCACCAACGTACTATGCGCATTTGGCAG
CCGCCCGTGCTCGTGAACATCACAATGCTCTGTTGCTTCGTAACCGAAAT
CGTATTGATTTTATTCCAAAGGAGGACTTGAGAAAAATCGAAAAATGTAC
TTTATTAAATTATTTTATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:811354..813389 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2596-2874:280 |
| Aaloc | 1039-2595:2037 |
|
