XLOC_044042 (mRNA) -

Overview
NameXLOC_044042
Unique NameXLOC_044042
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000107_pilon:663235..664183+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044042 ID=XLOC_044042|Name=XLOC_044042|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=949bp|location=Sequence derived from alignment at sc0000107_pilon:663235..664183+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCGGTATATTGTGCAAGCTGTTTGCTTGGTTTTATTTGTTTGCCA AGGTTTGTATTTATTACTTCAGCAAATTTCATTCGCCTAAAAGAAGAGTG CTTACGAGAATCCGGTATTTAACGTTATTTGAATTAGAAATTATCGATAT TCCCGTGTTGAAATGCCAGTACGCCGATATTTCGTGAAAAGGTTaccggt atttcgatattttgcaTCTGCGGAAGCCCCCGGTCTTTTAAACAGGGGTA AAAGTTTGCCTTGAAGATGTGGCCATAAGAtttttttAACCCTGTCAGAT GTTGTTCTCGAGcatgtgtctgtctgtctgtctgtctctttgtcATTAAA ACAGACAGGGTAGCCTTGAGACTTcgaaaatggtcggatttgacAGAGAT TCGGCATTTTTACATTTTCGACTATTTTGGAAACATATTTCGGAATTTGG CGGAGTTTTGAACCCTCTCAGAGATGTTCTTAAACCCCTGTTGTATATAT ACATAGCCATTTCTCTATAAGTCATCTCTATGGTCAATGGTTTGTAATTA AGAGAATTCTCTTTTTCAGGTGTTCACACTTTGGACTGTTACAAATGCAT TGGCCAACAATGTCCAACTGATCTCTCAGCTGCACCAAACGAAACTTGCA CTGGGGATCAAATATGCATCAATCAAGTCAATTACAGAAATAATACAGTC ACGTTGGTAATAAGGCAATGTACTGATCGGGTAGAGTGCACTAACAAATG TACCGATCCTGACCCTGATTTAAATGTGGATTGCCCCTTTTGTTGTGAGA CTGATCTTTGCAACATAAACTCACCATCTCCAGTTCAACCGACCGGCTCA CCCACCACACCAGGCGGTGGGTCGACAACCACTGTCGCGTTAGCCGTTTT GATCCCCGCCATGGTTTTCGGGCAATTCCTTCAAAAATGCGCAAATTAA

Coding sequence (CDS) from alignment at sc0000107_pilon:663235..664183+

>XLOC_044042 ID=XLOC_044042|Name=XLOC_044042|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=864bp|location=Sequence derived from alignment at sc0000107_pilon:663235..664183+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCGGTATATTGTGCAAGCTGTTTGCTTGGTTTTATTTGTTTGCCA
AGATGGATCGGTATATTGTGCAAGCTGTTTGCTTGGTTTTATTTGTTTGC
CAAGGTGTTCACACTTTGGACTGTTACAAATGCATTGGCCAACAATGTCC
AACTGATCTCTCAGCTGCACCAAACGAAACTTGCACTGGGGATCAAATAT
GCATCAATCAAGTCAATTACAGAAATAATACAGTCACGTTGGTAATAAGG
CAATGTACTGATCGGGTAGAGTGCACTAACAAATGTACCGATCCTGACCC
TGATTTAAATGTGGATTGCCCCTTTTGTTGTGAGACTGATCTTTGCAACA
TAAACTCACCATCTCCAGTTCAACCGACCGGCTCACCCACCACACCAGGC
GGTGGGTCGACAACCACTGTCGCGTTAGCCGTTTTGATCCCCGCCATGGT
TTTCGGGCAATTCCTTCAAAAATGCGCAAATTAAGTGTTCACACTTTGGA
CTGTTACAAATGCATTGGCCAACAATGTCCAACTGATCTCTCAGCTGCAC
CAAACGAAACTTGCACTGGGGATCAAATATGCATCAATCAAGTCAATTAC
AGAAATAATACAGTCACGTTGGTAATAAGGCAATGTACTGATCGGGTAGA
GTGCACTAACAAATGTACCGATCCTGACCCTGATTTAAATGTGGATTGCC
CCTTTTGTTGTGAGACTGATCTTTGCAACATAAACTCACCATCTCCAGTT
CAACCGACCGGCTCACCCACCACACCAGGCGGTGGGTCGACAACCACTGT
CGCGTTAGCCGTTTTGATCCCCGCCATGGTTTTCGGGCAATTCCTTCAAA
AATGCGCAAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044042XLOC_044042-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107_pilongenomesc0000107_pilon:663235..664183 +
Properties
Property NameValue
Aaloc55-432:572
Aaloc1-51:1