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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:604340..608717+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044038 ID=XLOC_044038|Name=XLOC_044038|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4378bp|location=Sequence derived from alignment at sc0000107_pilon:604340..608717+ (Clytia hemisphaerica_ch_hm2_pilon)
agccACAATTATGGAGAAGTTGAAGCCATCAAAGACTACTTGCTTTCTAA
GACTGCAGTTCGACCAACTATTGGTATTGTTTGTGGCTCTGGGCTTGGAG
GCCTGGTTGAAAATgtcgaaaacaaagaagaatTCAAGTATGAAGATATC
CCTGGATTCCCAAGAAGCACAGGTATAATTAGCTTTTTGCAGCAAAGATG
AGTTCGATGAAATACAATCCTGAAAGTGCTAACATACTTTATAACCCTAA
TATTCTCAAATGCCTAAGAAAATGTTATGTGATACTATTTTTGTAAAGCA
ACAACATGATGATAAATTACGAGGGTTCCaaagaaagatgaaaattgttt
gaaactttttaaatcTATATACCTCAAGAGTTCTCAAGAGGGTAGGAGAG
GGTAAACTTAAGGACTCTAACTTTTGGAAGTTCtttatcaaggttttgta
atAAGAGCATTTGTACCAAACTTTGTAAAACAACATACAACGTACTTTAT
ATTTCTAGTGAAAGGACACGCTGGCAAACTTGTTTTTGGAACTTTGAGTG
GCAAGCAAGTGGTTTGTCTTCAAGgaagatttcatttttatgaagGCCAT
GGAATGCTTAAAGTAAGTCATATCGTCAAAATTCAATAATagtttattgt
tattattattgttatgcttgcaaaatttcattacttttaTTGTGATAAAT
CTTTTCAACAATTCAATGCAAATCATGATAGGAAGAAACAAGCAATGAGT
TAATTTTAGAGTTCGTCTTCTTCCATATTGATTGATTACTTGACTACAAG
CGAAGTCAACTGATCTTCCAAAGAATTTAGAGTAAAAATGTGTTATAGAA
ACTCTTAGTagtaattgttaaaaaattttatatcgCTAGTGCACATTGCC
AGTACGAGTGATGGGTTTGTTAGGTATCAAAACGATGGTTGTGACGAACG
CAGCAGGTGGTGTGAATAGAGATTTCAATGTCGGTGATATTATGGTGATC
AAAGACCATGTTGGATTTCCCACAATTGCTGGTAATCATCCTTTGACTGG
CTTGAATGATGAAAGGTAATTTGTGTTGTCATTCTCATAGCAGATGATAC
CAAAATAAAGTTATTGGTACATATCCACTGACAATTTCAACTTATATTAT
TGTGCACATTGCCCTCAGACATTCCCAGATCTAGACCCATTGGAAGAgaa
taaaaaacataaataatgGATGGAAAAAGGTTGTCAAGGATAAGTTGATC
AAAAGCATTTTGGCAGgcaagaaaataatatttttgatttgGGTGTTAAT
TTGTGAACTGTCGGATGTCTATATTTGATAAGAACGGTTTTGCAAAGAAA
TCATCAGAATCTTGTTTCATTGCCAGTAGACTATCCTtaactatttttga
atttttctcacaaaaacaCAAGAAATGTGTCAACAACATATGTATggatt
ctttttatttaagaTTTGGACCACGGTTTCCTCCAATGAACCAGGTTTAT
GATTCCAGCTATCAAAAACTTGCATTGGAAATCGCAAACGAGGCAGGATA
CAGCAGTTTCATTCGTAATGGATGTTATTGCATGTTCAGTGGACCCACTT
ATGAAACCGTCGCAGAGTTACGATTGGCTGCTGCCGTAAGTTTtgtatat
acagttgacgctctcttattcgacgttcaactattcgataggctccatta
ttcgatgaaatttaaagtccctaccaacaagaaactctcataaacgacgt
tctactattcgataagctcccttattcgacgaaaatccgattccccttga
agatcgaattagagagcgtcaactgtacaggttttttataagaacgaaag
ATCTTGGAACAAGCTTTACAGGATTAAAAGTTGGTTGGTTAGGCTTCTCC
TGGAACTGTGCTTGCCTGTTGTCCTTGGTATTCTTGGTTTTCTCTCTTGT
AAATTGTTTAGTTATTGTACTATAAGAATTGTACTATGCTATGACACCCT
AACACTATGACATTCAACACCCCCAAAATTGACGACGACGGGAACGGCAA
GGTAAATTCGGCATAAGATGCTTATTTGTTCAAGAACTGTATGTTCTGAG
GAtgcatttttgtattttgagtaTTCTCCTATCAAGATGTGACCAAATAG
TGCAGAAAACTGTAAAGATTTTGATTAAGCTCTTCCTCTAAGAAGCTTTG
GACACCAAATTTTGCTCTGAAAACAGCAAAATTGGGACCCATCTGTcaca
cattttcatttttatctcaAGTTTGGTTCAAGAAAATATCTTGTGATTTG
CAAGTAacatttttacataaaattgaCAAGAATTTAGAAAGTCTAATTAA
AAATTGAGTGGTAGGAATACAGGCATATGCTTGTCACAGATTTTTGCTAG
TATTTCAAAGAcgaaacaaaatattaaaaaatgccTTAATCCTGTGACTT
CCTGCCACAGTACCAAATCCACAAAAACTTAAGTTCTAATACCTAACACA
TCTACTTCTATGGCAATTTGAAGACAGTTTGTCTTGTTTACAAACCCATG
GTACAGATTTGGTGCAATTCACCCATATCTAGCCATATATCGGTAATTTC
ATTTACTTCTATGACAATTTCAAGACAGTTTGTCTTGTTTACAAAACCCA
TGTATAGATTTGGTGTGAATTCACCCAATAGGCCATTTAATTTTATATCC
TTGGATGGATGAACATTTTTAGGGGTTTATCTATCATAGTTAAagtattc
tcaacttcagttgagctacaatctgacaatgtttgtctgtgtgtgtctgt
ctgtctgtcacaaaaactttagggcagccttcaaaagagaaaatgcttgg
atttggctgaaatttggcacacttgttccttgggtaaatatctgggggtg
tttttttcattttttgaaaatttccatttttggggcctggggacgagttt
ttccactgaagttgagcccagtgcgttgcgcacatTCGActattgaaaat
tattatttcaatACTGACAGTTTCATGTCTTTATTAAAAtaggggtttat
ctaaagaatttCCAGAAGTTAGGGACACGaaagaatttttgcaatttccc
AGGGAGATATAATCCATAGGTTTTTCTCCATTTGACTGGATGACCAAGCA
TTGTCCAcctatatttcatttttcagggtGAAATTATAAGCACAGTAGTT
TTCAAAGGGATCAAGGAAATTTTTTGGAGTTTTAGGGACCTTGCCCAATT
CGTCAAATATTAGACGGAACAAGCCGTTCtttttttCCTTACAAAAGCTT
AACTTTAACACGAAAATTGTTCTTCTACATAGCTTGGTGGTGATGCTGTG
GGAATGAGTACAGTACCTGAGGTTATTGTTGCTTCACACATGGGAATCAA
ATGTCTTGGCTTATCACTCATCACAAACAAATGCATTATGGAATACGACT
CATCGGAAGAACCTAACCACGCTGAAGTGTTAGAGGCTGGACGAAAAGCA
TCTAAGTATGTTTTGGATATTGTCACCAAGTTTGTCGGTAAACTTTAAAA
GACACTTTTTGATACATTAAATTTTGGTCGTAATGTTTAATTGGCTGTTT
TAATAGTCTGCATGATAATATCGTtgttacattttttataagttCGGTTA
AATTATATCTTTGCTATTCTTACAtactcaaatattttttgtagactttt
ttaaccaatttttttaCGGTCACGGACACATCAATATAAATTATGAAGAT
TTATAGATTTTCTtagatacttttttttttgcagagaTAAAATATTAATA
TACACTTGTTAGATATAAATTTGCCACCTTAAAAAACTAAATATTCTTTA
GTTGCTTATTTGCATTCCATTATCATATCTGACTTAGTATATGTACAGAG
TATACACAagatttttgtaagaacaaaaacaaactttatgaGAAGAATAG
GTCTTAATGGCTAAcaactttttaagaacatttgtaGGCTTTGATAACTC
CAAAACATGCAATTTAGGACATATATTACGGTAAAAGattaagaagattt
taaggATATTTCTATGTTGAAAATAAGGCTTcacaaattttgcaaatttc
agtataaagaaaaactattttatttcttttcattttcatccatACAACTG
CCCTCACGACTTgctttttcttccaaaattgtAGAACATCTTCTTCGTCC
ATGCAACCAACGGTTATGTGCAGGGTCGTGTGGGTACGAATTCTCTTCGC
TCTAGAATATTAAGAGGTTTTAAAGGCTTCGAGAATAGAAATTATAGCCG
TTGTTGATTAGTTCTGATCTTATATTTTAGacgattaaaaaaatacaata
tcaaTGATGTATGAGAAAGAAACAATCA Coding sequence (CDS) from alignment at sc0000107_pilon:604340..608717+ >XLOC_044038 ID=XLOC_044038|Name=XLOC_044038|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1686bp|location=Sequence derived from alignment at sc0000107_pilon:604340..608717+ (Clytia hemisphaerica_ch_hm2_pilon)
agccACAATTATGGAGAAGTTGAAGCCATCAAAGACTACTTGCTTTCTAA
GACTGCAGTTCGACCAACTATTGGTATTGTTTGTGGCTCTGGGCTTGGAG
GCCTGGTTGAAAATgtcgaaaacaaagaagaatTCAAGTATGAAGATATC
CCTGGATTCCCAAGAAGCACAGagccACAATTATGGAGAAGTTGAAGCCA
TCAAAGACTACTTGCTTTCTAAGACTGCAGTTCGACCAACTATTGGTATT
GTTTGTGGCTCTGGGCTTGGAGGCCTGGTTGAAAATgtcgaaaacaaaga
agaatTCAAGTATGAAGATATCCCTGGATTCCCAAGAAGCACAGTGAAAG
GACACGCTGGCAAACTTGTTTTTGGAACTTTGAGTGGCAAGCAAGTGGTT
TGTCTTCAAGgaagatttcatttttatgaagGCCATGGAATGCTTAAATG
AAAGGACACGCTGGCAAACTTGTTTTTGGAACTTTGAGTGGCAAGCAAGT
GGTTTGTCTTCAAGgaagatttcatttttatgaagGCCATGGAATGCTTA
AATGCACATTGCCAGTACGAGTGATGGGTTTGTTAGGTATCAAAACGATG
GTTGTGACGAACGCAGCAGGTGGTGTGAATAGAGATTTCAATGTCGGTGA
TATTATGGTGATCAAAGACCATGTTGGATTTCCCACAATTGCTGGTAATC
ATCCTTTGACTGGCTTGAATGATGAAAGTGCACATTGCCAGTACGAGTGA
TGGGTTTGTTAGGTATCAAAACGATGGTTGTGACGAACGCAGCAGGTGGT
GTGAATAGAGATTTCAATGTCGGTGATATTATGGTGATCAAAGACCATGT
TGGATTTCCCACAATTGCTGGTAATCATCCTTTGACTGGCTTGAATGATG
AAAGaTTTGGACCACGGTTTCCTCCAATGAACCAGGTTTATGATTCCAGC
TATCAAAAACTTGCATTGGAAATCGCAAACGAGGCAGGATACAGCAGTTT
CATTCGTAATGGATGTTATTGCATGTTCAGTGGACCCACTTATGAAACCG
TCGCAGAGTTACGATTGGCTGCTGCCaTTTGGACCACGGTTTCCTCCAAT
GAACCAGGTTTATGATTCCAGCTATCAAAAACTTGCATTGGAAATCGCAA
ACGAGGCAGGATACAGCAGTTTCATTCGTAATGGATGTTATTGCATGTTC
AGTGGACCCACTTATGAAACCGTCGCAGAGTTACGATTGGCTGCTGCCCT
TGGTGGTGATGCTGTGGGAATGAGTACAGTACCTGAGGTTATTGTTGCTT
CACACATGGGAATCAAATGTCTTGGCTTATCACTCATCACAAACAAATGC
ATTATGGAATACGACTCATCGGAAGAACCTAACCACGCTGAAGTGTTAGA
GGCTGGACGAAAAGCATCTAACTTGGTGGTGATGCTGTGGGAATGAGTAC
AGTACCTGAGGTTATTGTTGCTTCACACATGGGAATCAAATGTCTTGGCT
TATCACTCATCACAAACAAATGCATTATGGAATACGACTCATCGGAAGAA
CCTAACCACGCTGAAGTGTTAGAGGCTGGACGAAAAGCATCTAAgattaa
aaaaatacaatatcaaTGATGTATGAGAAAGAAACAATCAgattaaaaaa
atacaatatcaaTGATGTATGAGAAAGAAACAATCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:604340..608717 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 805-849:4334 |
| Aaloc | 631-801:3333 |
| Aaloc | 460-630:1465 |
| Aaloc | 283-456:890 |
| Aaloc | 181-282:511 |
| Aaloc | 7-177:1 |
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