XLOC_044005.2 (mRNA) -

Overview
NameXLOC_044005.2
Unique NameXLOC_044005.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:4364840..4366105-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044005.2 ID=XLOC_044005.2|Name=XLOC_044005.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1266bp|location=Sequence derived from alignment at sc0000001_pilon:4364840..4366105- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATGGAAGTTAGTATTCACAACACAAAAACAAACATTTTAAAGGA GAACCAGATTGGAGATGGTCAATCTTACTATCAAATGAAATTCCTATTTG AAATACGAGTTGGAAACAATGTTATTGGTTCATGCGATATTTACATTGAT AACTCAAAAGGTCCTATCGCATTTCTGGATAAAACTGGAAATACTTTCAT GTTTATGCCAAATACTAAGAAAATTAATTTCTGTGCTGAGTCTAAAGAAA GTGATGAAAACAACAATAGAATGCCACTAGAAGAAGTCACATCCAATGAA CTGACAACTACAGATCATAAGGTGATTCTACAATCCCACGAGGAACGGTA CCAAGTTAATACAAATGTCAATGACTTAGAGCCTTGTATTAATAAATTCT TGACTAATGAAAGTGACTTAAGCACCAATGAATTGGAAGGTTGCCATGAT GAAGTTGGTGAGAATGTCAACCATTCAAAAGTCAATGAATTCACCAATGA AGAGATTGACGAAGGTTCGGATGAATTTGTAGAACAATATGAAAGTAATC CAATTTCTAATGATCCAGAAATTTTAAGTGGAAACAATGATGAACTTTCA AATGATAAAAGTAAATGTTCTAAGCCATCTGTTGATTTGTTTTTTGATAT TACTCGCCATGACAACACTAATGAAACAAGCGATCATCAAAATTATGAAG TTGGAGTCAAAATTGAAAAGCTCGTTCCGGGGTCTCATGCTTTGCCCATA GTTAATGATTCACCTCTGAGCTCTCTGAGTATAGAGAACAGTAAGAAAAC TTTAGAAAAGGCGAATGAGAATAATCTTGTAGAAAATCAAACAAACAAGT TTCAATGTCAAGAATGTGGTAAATTCTATTCCACAGAAAAGACTTTGAAA ATACATATTAATACGATTCATGAGGAGAATGGTCATTTCAATTGCGAAGA GTGTGGTAAGACATTTGCAACCCTCATATATCTTAAACGGCATGAAAAAA TCCATGGGGTAAAATTACATATATGTGAGGAATGTGGTAAGTCTTTTACC CAGCGTTGTATTCTCCTTAAACACCAAAAAACGCACACTGGAGTAAAACC TTTTGAATGCAAGGAATGTGGAAAACGGTTTGCATATAAAGCATCTGTCT TTGGACACATCAAAGCAGTCCATAAAGGTTTGAGACCATTTGAATGTCCG GAATGTGGTAAATCATTTTCACATAAATCAAGTATGATACATCACTGTCT TACAATCCACAAATGA

Coding sequence (CDS) from alignment at sc0000001_pilon:4364840..4366105-

>XLOC_044005.2 ID=XLOC_044005.2|Name=XLOC_044005.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2532bp|location=Sequence derived from alignment at sc0000001_pilon:4364840..4366105- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATGGAAGTTAGTATTCACAACACAAAAACAAACATTTTAAAGGA
GAACCAGATTGGAGATGGTCAATCTTACTATCAAATGAAATTCCTATTTG
AAATACGAGTTGGAAACAATGTTATTGGTTCATGCGATATTTACATTGAT
AACTCAAAAGGTCCTATCGCATTTCTGGATAAAACTGGAAATACTTTCAT
GTTTATGCCAAATACTAAGAAAATTAATTTCTGTGCTGAGTCTAAAGAAA
GTGATGAAAACAACAATAGAATGCCACTAGAAGAAGTCACATCCAATGAA
CTGACAACTACAGATCATAAGGTGATTCTACAATCCCACGAGGAACGGTA
CCAAGTTAATACAAATGTCAATGACTTAGAGCCTTGTATTAATAAATTCT
TGACTAATGAAAGTGACTTAAGCACCAATGAATTGGAAGGTTGCCATGAT
GAAGTTGGTGAGAATGTCAACCATTCAAAAGTCAATGAATTCACCAATGA
AGAGATTGACGAAGGTTCGGATGAATTTGTAGAACAATATGAAAGTAATC
CAATTTCTAATGATCCAGAAATTTTAAGTGGAAACAATGATGAACTTTCA
AATGATAAAAGTAAATGTTCTAAGCCATCTGTTGATTTGTTTTTTGATAT
TACTCGCCATGACAACACTAATGAAACAAGCGATCATCAAAATTATGAAG
TTGGAGTCAAAATTGAAAAGCTCGTTCCGGGGTCTCATGCTTTGCCCATA
GTTAATGATTCACCTCTGAGCTCTCTGAGTATAGAGAACAGTAAGAAAAC
TTTAGAAAAGGCGAATGAGAATAATCTTGTAGAAAATCAAACAAACAAGT
TTCAATGTCAAGAATGTGGTAAATTCTATTCCACAGAAAAGACTTTGAAA
ATACATATTAATACGATTCATGAGGAGAATGGTCATTTCAATTGCGAAGA
GTGTGGTAAGACATTTGCAACCCTCATATATCTTAAACGGCATGAAAAAA
TCCATGGGGTAAAATTACATATATGTGAGGAATGTGGTAAGTCTTTTACC
CAGCGTTGTATTCTCCTTAAACACCAAAAAACGCACACTGGAGTAAAACC
TTTTGAATGCAAGGAATGTGGAAAACGGTTTGCATATAAAGCATCTGTCT
TTGGACACATCAAAGCAGTCCATAAAGGTTTGAGACCATTTGAATGTCCG
GAATGTGGTAAATCATTTTCACATAAATCAAGTATGATACATCACTGTCT
TACAATCCACAAATGAATGGAAATGGAAGTTAGTATTCACAACACAAAAA
CAAACATTTTAAAGGAGAACCAGATTGGAGATGGTCAATCTTACTATCAA
ATGAAATTCCTATTTGAAATACGAGTTGGAAACAATGTTATTGGTTCATG
CGATATTTACATTGATAACTCAAAAGGTCCTATCGCATTTCTGGATAAAA
CTGGAAATACTTTCATGTTTATGCCAAATACTAAGAAAATTAATTTCTGT
GCTGAGTCTAAAGAAAGTGATGAAAACAACAATAGAATGCCACTAGAAGA
AGTCACATCCAATGAACTGACAACTACAGATCATAAGGTGATTCTACAAT
CCCACGAGGAACGGTACCAAGTTAATACAAATGTCAATGACTTAGAGCCT
TGTATTAATAAATTCTTGACTAATGAAAGTGACTTAAGCACCAATGAATT
GGAAGGTTGCCATGATGAAGTTGGTGAGAATGTCAACCATTCAAAAGTCA
ATGAATTCACCAATGAAGAGATTGACGAAGGTTCGGATGAATTTGTAGAA
CAATATGAAAGTAATCCAATTTCTAATGATCCAGAAATTTTAAGTGGAAA
CAATGATGAACTTTCAAATGATAAAAGTAAATGTTCTAAGCCATCTGTTG
ATTTGTTTTTTGATATTACTCGCCATGACAACACTAATGAAACAAGCGAT
CATCAAAATTATGAAGTTGGAGTCAAAATTGAAAAGCTCGTTCCGGGGTC
TCATGCTTTGCCCATAGTTAATGATTCACCTCTGAGCTCTCTGAGTATAG
AGAACAGTAAGAAAACTTTAGAAAAGGCGAATGAGAATAATCTTGTAGAA
AATCAAACAAACAAGTTTCAATGTCAAGAATGTGGTAAATTCTATTCCAC
AGAAAAGACTTTGAAAATACATATTAATACGATTCATGAGGAGAATGGTC
ATTTCAATTGCGAAGAGTGTGGTAAGACATTTGCAACCCTCATATATCTT
AAACGGCATGAAAAAATCCATGGGGTAAAATTACATATATGTGAGGAATG
TGGTAAGTCTTTTACCCAGCGTTGTATTCTCCTTAAACACCAAAAAACGC
ACACTGGAGTAAAACCTTTTGAATGCAAGGAATGTGGAAAACGGTTTGCA
TATAAAGCATCTGTCTTTGGACACATCAAAGCAGTCCATAAAGGTTTGAG
ACCATTTGAATGTCCGGAATGTGGTAAATCATTTTCACATAAATCAAGTA
TGATACATCACTGTCTTACAATCCACAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_044005.2XLOC_044005.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:4364840..4366105 -
Properties
Property NameValue
Aaloc1-1266:1267