XLOC_043997 (mRNA) -

Overview
NameXLOC_043997
Unique NameXLOC_043997
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:4447625..4448632-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043997 ID=XLOC_043997|Name=XLOC_043997|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1008bp|location=Sequence derived from alignment at sc0000001_pilon:4447625..4448632- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAGAATAATGAAACAGTCGAGAAGAAAGAGAAAAAGATAAAATT GAAAATCGACAACGTTTCAATCAAGGAAATCGTGGATAAAAATGAAGGCT CTAAAATCCCAATCAAATTTTCACTTGAGATCAAGAAAGGTGGTAAGATA ATGGGTACGTGTCATGTAACTATTGATAATTTGTTTGACCGTGTCGAGTT TGGCGATAATCGAAAGAATGATTTTTTATTTAAGCCTTATGAAAGTAAAA GGAAAATTTCCAAAACTCCAAAGCCTAAAGAAGGGTCTAAACAATGCGAG GATTGTGGGAAAGTATTTAAAACAAATTACAGGCGGCGAATTCATCATGA TGCCATTCATAAAGGTCTCAAACCATTTAAATGTACAGAATGTGGTAAAT CATTTGCACGAAAGGAAGAGCTAGGCAAGCATTTACACGTTCATTCTGAA ATTAAACCTTATACATGTCAAGTTTGTGGTAAAGGTTTTGTACACAAATG CCGAATGGAAACACACGTAGATATTGCTCATAAAGGTCTTCAACCTTTTC AATGTCAGGAATGTGAGAAACGTTACTCACACAAGTTTGATCTCAAAAGA CACGTAGATGTTGCTCATAGAGGTCTTAAGCCATTTAAATGTACGAAATG TGAGCAATCTTTTGCCAACAAATACGACTTCAAACGACATAAAAAGACTC ATGAAGATATAGAAGCGGTCGTAAATCCTCCTCGGGAACCAGCAGCTGTT GTCCTACATAAAGACCATCAATTTAATACCATCAATCCTCGCGAGACACC TATCTTTCCTCGAGAAACGTTAACTTTTCCCAGAGACGCTTCAGTTTTTT CTCGGGATGTGTTGACGAATCGTCCAGAACCACCATCGTCAATGGTAGAA ATGGTTGTCTGTGATAATGAAATTGCAAAACAGAATTTGATGGTCTTGGC AGGGTTTTCTGGAGCTAACCAACCAATGGCTACAAACATGAGTCACCAAC AACCATAA

Coding sequence (CDS) from alignment at sc0000001_pilon:4447625..4448632-

>XLOC_043997 ID=XLOC_043997|Name=XLOC_043997|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2016bp|location=Sequence derived from alignment at sc0000001_pilon:4447625..4448632- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAGAATAATGAAACAGTCGAGAAGAAAGAGAAAAAGATAAAATT
GAAAATCGACAACGTTTCAATCAAGGAAATCGTGGATAAAAATGAAGGCT
CTAAAATCCCAATCAAATTTTCACTTGAGATCAAGAAAGGTGGTAAGATA
ATGGGTACGTGTCATGTAACTATTGATAATTTGTTTGACCGTGTCGAGTT
TGGCGATAATCGAAAGAATGATTTTTTATTTAAGCCTTATGAAAGTAAAA
GGAAAATTTCCAAAACTCCAAAGCCTAAAGAAGGGTCTAAACAATGCGAG
GATTGTGGGAAAGTATTTAAAACAAATTACAGGCGGCGAATTCATCATGA
TGCCATTCATAAAGGTCTCAAACCATTTAAATGTACAGAATGTGGTAAAT
CATTTGCACGAAAGGAAGAGCTAGGCAAGCATTTACACGTTCATTCTGAA
ATTAAACCTTATACATGTCAAGTTTGTGGTAAAGGTTTTGTACACAAATG
CCGAATGGAAACACACGTAGATATTGCTCATAAAGGTCTTCAACCTTTTC
AATGTCAGGAATGTGAGAAACGTTACTCACACAAGTTTGATCTCAAAAGA
CACGTAGATGTTGCTCATAGAGGTCTTAAGCCATTTAAATGTACGAAATG
TGAGCAATCTTTTGCCAACAAATACGACTTCAAACGACATAAAAAGACTC
ATGAAGATATAGAAGCGGTCGTAAATCCTCCTCGGGAACCAGCAGCTGTT
GTCCTACATAAAGACCATCAATTTAATACCATCAATCCTCGCGAGACACC
TATCTTTCCTCGAGAAACGTTAACTTTTCCCAGAGACGCTTCAGTTTTTT
CTCGGGATGTGTTGACGAATCGTCCAGAACCACCATCGTCAATGGTAGAA
ATGGTTGTCTGTGATAATGAAATTGCAAAACAGAATTTGATGGTCTTGGC
AGGGTTTTCTGGAGCTAACCAACCAATGGCTACAAACATGAGTCACCAAC
AACCATAAATGGCAGAGAATAATGAAACAGTCGAGAAGAAAGAGAAAAAG
ATAAAATTGAAAATCGACAACGTTTCAATCAAGGAAATCGTGGATAAAAA
TGAAGGCTCTAAAATCCCAATCAAATTTTCACTTGAGATCAAGAAAGGTG
GTAAGATAATGGGTACGTGTCATGTAACTATTGATAATTTGTTTGACCGT
GTCGAGTTTGGCGATAATCGAAAGAATGATTTTTTATTTAAGCCTTATGA
AAGTAAAAGGAAAATTTCCAAAACTCCAAAGCCTAAAGAAGGGTCTAAAC
AATGCGAGGATTGTGGGAAAGTATTTAAAACAAATTACAGGCGGCGAATT
CATCATGATGCCATTCATAAAGGTCTCAAACCATTTAAATGTACAGAATG
TGGTAAATCATTTGCACGAAAGGAAGAGCTAGGCAAGCATTTACACGTTC
ATTCTGAAATTAAACCTTATACATGTCAAGTTTGTGGTAAAGGTTTTGTA
CACAAATGCCGAATGGAAACACACGTAGATATTGCTCATAAAGGTCTTCA
ACCTTTTCAATGTCAGGAATGTGAGAAACGTTACTCACACAAGTTTGATC
TCAAAAGACACGTAGATGTTGCTCATAGAGGTCTTAAGCCATTTAAATGT
ACGAAATGTGAGCAATCTTTTGCCAACAAATACGACTTCAAACGACATAA
AAAGACTCATGAAGATATAGAAGCGGTCGTAAATCCTCCTCGGGAACCAG
CAGCTGTTGTCCTACATAAAGACCATCAATTTAATACCATCAATCCTCGC
GAGACACCTATCTTTCCTCGAGAAACGTTAACTTTTCCCAGAGACGCTTC
AGTTTTTTCTCGGGATGTGTTGACGAATCGTCCAGAACCACCATCGTCAA
TGGTAGAAATGGTTGTCTGTGATAATGAAATTGCAAAACAGAATTTGATG
GTCTTGGCAGGGTTTTCTGGAGCTAACCAACCAATGGCTACAAACATGAG
TCACCAACAACCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043997XLOC_043997-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:4447625..4448632 -
Properties
Property NameValue
Aaloc1-1008:1009