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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000296_pilon:6941..8209- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043993 ID=XLOC_043993|Name=XLOC_043993|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1269bp|location=Sequence derived from alignment at sc0000296_pilon:6941..8209- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAACTTTGGCCATCAACACCATCCATATCTTCCAAGACCCAATTC
TATGAATTTCAATCGTATGGTTGAACCAAAGCCCATATTCCAACAAATGT
TAAATGTAACACAAGAGTCCTTACAAAGTCAACCATTCTATAACATCCCC
TTGGTGAAAGAGAAACTCGACATTCACCAGTATGCTTTTAACGCACCAAC
ACTAGCTAGAATCAACGCAGCTTCGCAGCAGAAATCAAACGCCAAGAAGG
TAGTTATTAGTCAACCCACCCCTGTCTCAAGTGTTCCAAATGTAACCGCA
AACCCTTATAGCAGTGCTACACCGAGTATAGCAAATACAAATCGCCAAGT
CCAGAATACACCTCCGAGCTTGCCAGATAACATCCAATGGACGAGCTAAC
CCTGCAATGGCAAACCAGCAAATGTTTAATACTCCAAACAACGTACCGCC
AAATATGCTTAACAATGTCAACATGAGTACAGTTAATCAGCAACCAGTCT
TCAACCAACAGCCCATGGCAGGAAACGCCTTCTTTCCACCCCAAGCAACG
CCCAATGTAATGAGTGAAAATGCGAATACAGCGACCACTATGAATCAACC
AGTATTCAATAACCCTAATATGCCGGCCGGTATGATGACTGGCAACTTAA
ACCCGTCAATGATCAACCAACCACAAGCCTACAATTCTTCATTCTTCCAA
GGAAATGTCACCAATGCTAATCCAACTCCAGTCAATCAACAACAAGCGTT
TTCCATCTCAAAGTACATCTCAAAATCCGATAGCTAGCTCATTCCAACAA
AAAACCAACACCTAATGCTGCAGCTGAGCAATTGAACACAAACATTCTAA
GTCAAAACGTATTTCCTAACAGCATTCCGAATCTGCCCGAAAACGCGTCA
GAGACGTTTACAATGTTAGACGAGACATCTCAACCTGGTACGCCCAATGC
CAAACAATCAAAATCTTCAGAATCACGAGCTAACAAGGCAGCTGCCGGTG
AATTGTCTTTTAAGTGCAAGGAATGTGGTAAGGGGTTTGCACAAAAAGGA
CATTTGAAAGCACACGAGGAAACACATTCAGGTATTCGACCTTTCAGTTG
CGATATTTGCGAAAAGAAGTTCTTGAGGAAAGACCATTTAAAACGACATT
TGGCCGCTCACTCTGGTCTTAAGCCATTCAAGTGTGATTACTGTGGTAAA
TGTTATTCACAGAAGCATCCTCTTAAAAAGCACATGTTAGTTTGCAAAGA
AGGGAACTCATCGTCGTGA Coding sequence (CDS) from alignment at sc0000296_pilon:6941..8209- >XLOC_043993 ID=XLOC_043993|Name=XLOC_043993|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000296_pilon:6941..8209- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAACTTTGGCCATCAACACCATCCATATCTTCCAAGACCCAATTC
TATGAATTTCAATCGTATGGTTGAACCAAAGCCCATATTCCAACAAATGT
TAAATGTAACACAAGAGTCCTTACAAAGTCAACCATTCTATAACATCCCC
TTGGTGAAAGAGAAACTCGACATTCACCAGTATGCTTTTAACGCACCAAC
ACTAGCTAGAATCAACGCAGCTTCGCAGCAGAAATCAAACGCCAAGAAGG
TAGTTATTAGTCAACCCACCCCTGTCTCAAGTGTTCCAAATGTAACCGCA
AACCCTTATAGCAGTGCTACACCGAGTATAGCAAATACAAATCGCCAAGT
CCAGAATACACCTCCGAGCTTGCCAGATAACATCCAATGGACGAGCTAAC
CCTGCAATGGCAAACCAGCAAATGTTTAATACTCCAAACAACGTACCGCC
AAATATGCTTAACAATGTCAACATGAGTACAGTTAATCAGCAACCAGTCT
TCAACCAACAGCCCATGGCAGGAAACGCCTTCTTTCCACCCCAAGCAACG
CCCAATGTAATGAGTGAAAATGCGAATACAGCGACCACTATGAATCAACC
AGTATTCAATAACCCTAATATGCCGGCCGGTATGATGACTGGCAACTTAA
ACCCGTCAATGATCAACCAACCACAAGCCTACAATTCTTCATTCTTCCAA
GGAAATGTCACCAATGCTAATCCAACTCCAGTCAATCAACAACAAGCGTT
TTCCATCTCAAAGTACATCTCAAAATCCGATAGCTAGCTCATTCCAACAA
AAAACCAACACCTAATGCTGCAGCTGAGCAATTGAACACAAACATTCTAA
GTCAAAACGTATTTCCTAACAGCATTCCGAATCTGCCCGAAAACGCGTCA
GAGACGTTTACAATGTTAGACGAGACATCTCAACCTGGTACGCCCAATGC
CAAACAATCAAAATCTTCAGAATCACGAGCTAACAAGGCAGCTGCCGGTG
AATTGTCTTTTAAGTGCAAGGAATGTGGTAAGGGGTTTGCACAAAAAGGA
CATTTGAAAGCACACGAGGAAACACATTCAGGTATTCGACCTTTCAGTTG
CGATATTTGCGAAAAGAAGTTCTTGAGGAAAGACCATTTAAAACGACATT
TGGCCGCTCACTCTGGTCTTAAGCCATTCAAGTGTGATTACTGTGGTAAA
TGTTATTCACAGAAGCATCCTCTTAAAAAGCACATGTTAGTTTGCAAAGA
AGGGAACTCATCGTCGTGAATGAACAACTTTGGCCATCAACACCATCCAT
ATCTTCCAAGACCCAATTCTATGAATTTCAATCGTATGGTTGAACCAAAG
CCCATATTCCAACAAATGTTAAATGTAACACAAGAGTCCTTACAAAGTCA
ACCATTCTATAACATCCCCTTGGTGAAAGAGAAACTCGACATTCACCAGT
ATGCTTTTAACGCACCAACACTAGCTAGAATCAACGCAGCTTCGCAGCAG
AAATCAAACGCCAAGAAGGTAGTTATTAGTCAACCCACCCCTGTCTCAAG
TGTTCCAAATGTAACCGCAAACCCTTATAGCAGTGCTACACCGAGTATAG
CAAATACAAATCGCCAAGTCCAGAATACACCTCCGAGCTTGCCAGATAAC
ATCCAATGGACGAGCTAACCCTGCAATGGCAAACCAGCAAATGTTTAATA
CTCCAAACAACGTACCGCCAAATATGCTTAACAATGTCAACATGAGTACA
GTTAATCAGCAACCAGTCTTCAACCAACAGCCCATGGCAGGAAACGCCTT
CTTTCCACCCCAAGCAACGCCCAATGTAATGAGTGAAAATGCGAATACAG
CGACCACTATGAATCAACCAGTATTCAATAACCCTAATATGCCGGCCGGT
ATGATGACTGGCAACTTAAACCCGTCAATGATCAACCAACCACAAGCCTA
CAATTCTTCATTCTTCCAAGGAAATGTCACCAATGCTAATCCAACTCCAG
TCAATCAACAACAAGCGTTTTCCATCTCAAAGTACATCTCAAAATCCGAT
AGCTAGCTCATTCCAACAAAAAACCAACACCTAATGCTGCAGCTGAGCAA
TTGAACACAAACATTCTAAGTCAAAACGTATTTCCTAACAGCATTCCGAA
TCTGCCCGAAAACGCGTCAGAGACGTTTACAATGTTAGACGAGACATCTC
AACCTGGTACGCCCAATGCCAAACAATCAAAATCTTCAGAATCACGAGCT
AACAAGGCAGCTGCCGGTGAATTGTCTTTTAAGTGCAAGGAATGTGGTAA
GGGGTTTGCACAAAAAGGACATTTGAAAGCACACGAGGAAACACATTCAG
GTATTCGACCTTTCAGTTGCGATATTTGCGAAAAGAAGTTCTTGAGGAAA
GACCATTTAAAACGACATTTGGCCGCTCACTCTGGTCTTAAGCCATTCAA
GTGTGATTACTGTGGTAAATGTTATTCACAGAAGCATCCTCTTAAAAAGC
ACATGTTAGTTTGCAAAGAAGGGAACTCATCGTCGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000296_pilon | genome | sc0000296_pilon:6941..8209 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 799-1266:469 |
| Aaloc | 748-798:521 |
| Aaloc | 385-747:885 |
| Aaloc | 1-384:1270 |
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