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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000296_pilon:12446..13535- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043991 ID=XLOC_043991|Name=XLOC_043991|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1090bp|location=Sequence derived from alignment at sc0000296_pilon:12446..13535- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTATTTTTGTAATCTTTCGCATCAAAGTGAAATGATCAATTCTTC
AGAAATTATACTAATGCTCAAAGAAGAACCAGCTGATGACATTGAAGTCT
CAAATGACGTTAATTTTCCTGCTACTGTTTCTAGTGAAGGATCACCAGAA
GAGCCTTCTTCAGAGTCAATTGAAGAACCCTACAAGGCAAAGAAAGTTCT
AAAGTCTTACAAATGCAATGTTTGTGGTAAGAGTATGACAACACGTAGTA
ACCTCAACAAACATCTCTTTATCCACAATGAAAAGAAGGAATTTAAATGC
GAGAAATGTGGTAAAGCGTTTGCACGAAGGGAATATATGATGAGACATCT
TGAGACTCACTCTAGCCTTAAACCCCACAAATGCGATAAATGCAGTTGGT
GTTTTATACAGAAGAAACATTTAATAAAACACGCTATCACACATCTAAAG
GAAAAGCATTTTAAATGCACGGAGTGTGGGAAAGCGTTTGCAGCAAAAAT
GTATGTCAAAAACCACATGGAAACTCATAAAAAGGATAGGTCATATGAAT
GTGAATCTTGTCATCGAACTTATACACGTAAAGAAAGTCTTAAAGCACAT
ATCGCCTCTCACCATAATCCGATGTCCAAACTGGAAACAGGTCAATACCA
AGGAGGATCAATTTGACACATTTTCTACATTGCAACTATTGGATCTGGTG
CAAAATTTTCCCATCGCTGAACCATCTGACGACAAACCTTTTCAGTGTCA
CGTATGTGGAAAATGCGTGACGACCAAGAGCAATCTGAACAAGCATCTTT
TCATACATAATGATACGAAAATATTCAAATGTGAGGAGTGTGGTAAAACG
TTTGCACGAAGAGAATATTTAGTGAGACACATTGAATCTCATAGGGGTGT
TAGACCATTTAAATGTGAGGTATGTGGTAATGCATTTACACAAAAGAAAC
ATTTGAAAAGACACGCGGTTACTCATACAGGTGTTAAACCATTTGAATGT
AAGGAATGTGGTAGATGCTTTGCCTTCAAAGAATATCTCAAATCACATAT
GATGAAAACCCATTTCAAACAGCAATTTAAGAATTTATAA Coding sequence (CDS) from alignment at sc0000296_pilon:12446..13535- >XLOC_043991 ID=XLOC_043991|Name=XLOC_043991|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2180bp|location=Sequence derived from alignment at sc0000296_pilon:12446..13535- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTATTTTTGTAATCTTTCGCATCAAAGTGAAATGATCAATTCTTC
AGAAATTATACTAATGCTCAAAGAAGAACCAGCTGATGACATTGAAGTCT
CAAATGACGTTAATTTTCCTGCTACTGTTTCTAGTGAAGGATCACCAGAA
GAGCCTTCTTCAGAGTCAATTGAAGAACCCTACAAGGCAAAGAAAGTTCT
AAAGTCTTACAAATGCAATGTTTGTGGTAAGAGTATGACAACACGTAGTA
ACCTCAACAAACATCTCTTTATCCACAATGAAAAGAAGGAATTTAAATGC
GAGAAATGTGGTAAAGCGTTTGCACGAAGGGAATATATGATGAGACATCT
TGAGACTCACTCTAGCCTTAAACCCCACAAATGCGATAAATGCAGTTGGT
GTTTTATACAGAAGAAACATTTAATAAAACACGCTATCACACATCTAAAG
GAAAAGCATTTTAAATGCACGGAGTGTGGGAAAGCGTTTGCAGCAAAAAT
GTATGTCAAAAACCACATGGAAACTCATAAAAAGGATAGGTCATATGAAT
GTGAATCTTGTCATCGAACTTATACACGTAAAGAAAGTCTTAAAGCACAT
ATCGCCTCTCACCATAATCCGATGTCCAAACTGGAAACAGGTCAATACCA
AGGAGGATCAATTTGACACATTTTCTACATTGCAACTATTGGATCTGGTG
CAAAATTTTCCCATCGCTGAACCATCTGACGACAAACCTTTTCAGTGTCA
CGTATGTGGAAAATGCGTGACGACCAAGAGCAATCTGAACAAGCATCTTT
TCATACATAATGATACGAAAATATTCAAATGTGAGGAGTGTGGTAAAACG
TTTGCACGAAGAGAATATTTAGTGAGACACATTGAATCTCATAGGGGTGT
TAGACCATTTAAATGTGAGGTATGTGGTAATGCATTTACACAAAAGAAAC
ATTTGAAAAGACACGCGGTTACTCATACAGGTGTTAAACCATTTGAATGT
AAGGAATGTGGTAGATGCTTTGCCTTCAAAGAATATCTCAAATCACATAT
GATGAAAACCCATTTCAAACAGCAATTTAAGAATTTATAAATGGTTTATT
TTTGTAATCTTTCGCATCAAAGTGAAATGATCAATTCTTCAGAAATTATA
CTAATGCTCAAAGAAGAACCAGCTGATGACATTGAAGTCTCAAATGACGT
TAATTTTCCTGCTACTGTTTCTAGTGAAGGATCACCAGAAGAGCCTTCTT
CAGAGTCAATTGAAGAACCCTACAAGGCAAAGAAAGTTCTAAAGTCTTAC
AAATGCAATGTTTGTGGTAAGAGTATGACAACACGTAGTAACCTCAACAA
ACATCTCTTTATCCACAATGAAAAGAAGGAATTTAAATGCGAGAAATGTG
GTAAAGCGTTTGCACGAAGGGAATATATGATGAGACATCTTGAGACTCAC
TCTAGCCTTAAACCCCACAAATGCGATAAATGCAGTTGGTGTTTTATACA
GAAGAAACATTTAATAAAACACGCTATCACACATCTAAAGGAAAAGCATT
TTAAATGCACGGAGTGTGGGAAAGCGTTTGCAGCAAAAATGTATGTCAAA
AACCACATGGAAACTCATAAAAAGGATAGGTCATATGAATGTGAATCTTG
TCATCGAACTTATACACGTAAAGAAAGTCTTAAAGCACATATCGCCTCTC
ACCATAATCCGATGTCCAAACTGGAAACAGGTCAATACCAAGGAGGATCA
ATTTGACACATTTTCTACATTGCAACTATTGGATCTGGTGCAAAATTTTC
CCATCGCTGAACCATCTGACGACAAACCTTTTCAGTGTCACGTATGTGGA
AAATGCGTGACGACCAAGAGCAATCTGAACAAGCATCTTTTCATACATAA
TGATACGAAAATATTCAAATGTGAGGAGTGTGGTAAAACGTTTGCACGAA
GAGAATATTTAGTGAGACACATTGAATCTCATAGGGGTGTTAGACCATTT
AAATGTGAGGTATGTGGTAATGCATTTACACAAAAGAAACATTTGAAAAG
ACACGCGGTTACTCATACAGGTGTTAAACCATTTGAATGTAAGGAATGTG
GTAGATGCTTTGCCTTCAAAGAATATCTCAAATCACATATGATGAAAACC
CATTTCAAACAGCAATTTAAGAATTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000296_pilon | genome | sc0000296_pilon:12446..13535 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-1089:451 |
| Aaloc | 1-639:1091 |
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