|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000061_pilon:58676..63932- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043977 ID=XLOC_043977|Name=XLOC_043977|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5257bp|location=Sequence derived from alignment at sc0000061_pilon:58676..63932- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTTCAAATCAAAGGTTCTTCAGATTATGAAACGACAAAAGAGCAA
AGAAAAACAAAAAAGTTTTGGTAAGTTTTCCTTACTCTGCCAATTGACTA
TTATAAACCTTGGGCAAGGCTATATTCACCATCTTTGATCGGAGTTTTTT
GGGTAAGTGCTATCCACAAAAAAGCCGTTTAAGCTATTAAAGATTATAAC
ATCAAGTGGTGCTAAAGGCTTGAGGGCACGAGAAGTTTTTATCACGTTAG
TGCAATGCAACATGCTCCATTCCCTTTTGAGCCTCTTCTTAGAAAACCAC
AGATTTGGGCACTATACCCAGTAGCGTGTTGGCAGAGGGTTTCTGAGAAA
TCACCTGAAAAATTTTCTGAAATCACCTCCCCAGTTTGCCCCGAATCTTT
GTCGACCCACCACGCTACTGGCTATACCCAGTAGCGTAGACATGAGAAGC
GCATGCTTTGTGTAAGGAGAGTAGATTTTTATGACACTGTAATTATCTTT
TTATAATATGAATAGATGATAACAGTGCCCGGGGGTACTAGGGTTGAAGG
ATGAGGGGTATGTGCGGATGGGACCTCAAAAAACCGACCCTTAGAGAGAC
TAATTTGAATTTTTTTGATTTTGGCGACCCTTGGGTTAGAGAGACTTTGA
AAGGTGAAAAAACTTACCCTTACCGTCGGCTTATACCCACCATTTTTGCC
TAAGTACCCCCCCCCGTAACAGTGTCATAAAATATGCTCTCCTACACAAA
TTTTGCGCCCCATTGTCTACACTGCTGCTATACCCCGCCAGTCCCACTGC
CCCGGTGAAAGTATTTCCTTTAGTGGGGAATTTTCCCCGGGAATGAGAAA
GTTCAACCCGCGTTTTTCGCACTCCATTCCAGTCATTTAAACGATTGGGT
GCGCGCTTTTGGGGTTATGAAATATTAGGGCTCTCGTATTGATATGACCA
GATCGTAGTAGTCTAAGAACTAAGAAGGAAACAGCAGGACAAAAGGAAAA
CATCTTCCTGGCTATACGTCATATCCTACATATCTTTTCGCTTTAAAAAA
CTGTAAAAATGAAGGGTCACTTTATATAACTTTCTACATTGGCTGAATGT
TTTAAATTTCAATTTATAAAATGGAAGAAAAATAAAAAGGAAAAAATAAA
AATTAACATCCTGAGGCTGAATTAATATCACTATGAAGTCATTTAAAGTT
CACTGTTAAAGATTTTGACTTTTCTCCATTACAGATAGGTTACAAGCTTT
TTTTTCATTTTATTTCTCAATGACAGTTTTATTGGAACTTATACTGTGAT
AAAACATAACCAAAACGGATCTATGCACAGTTAGAAAAAAATCAACTCAA
AAAAAAGAAGGCGTTTTGAGAGGATGTTTCGTAAATTTCATAAAATAGAT
CTTTTACTCTCGGGTACCTAATAGCCGGGGGGTTTGGAATAAGCAGGGGG
GTTGGAAAAATTCTCAAAAATTGATAAGCGGGGGGGGGGTTGGAATAAAA
ATGTTCTGGGTGGAAAATTTTCGAAAAGGAGGCTAATACAGCAGAATTAG
GACAAAAGAGGGAACTTTCAAAAAAAAATTCCCAAAAATCAATAAGCGGG
GGGGTCGGAATAAGAATGTCCTGGGTGGAAAGTTTTCGAAAAATTAATTA
GCGGGGGCCCCCCGGCTATTAAGTACCCGAGAGTAACCTTTTCAAGAGAT
TCAAATTTCAAGATTATGCTAGCCTTATTTAGCTTTTGGTAGTAATAATT
TCCTTTTTTTTCCATCCTGACCTCGCTTGAATCGCAGGCTATTACATAGC
CGCAAATAGTAAAAGAAGCACGAATACGATAGTGAATGTCAGAAACCTAA
ACCTGGCAGTGCTTCAATTTCTAATTGATACCTTTTTTAGTGCCGTAGGA
AACATATTGACATTAGGGGAGGGCAAAAGTTCAATGACACCGTGAGGGCC
AACCATGGTTTGACGCAAGGGGGTTTTTGAAATAAGGTAAAATACTCCAT
TTTAGGAAAAAAAATCACTCTTAAAAAATTGATTGGGGGCTAAGTACCCC
TTGCCACCCCACCCCCCTCCCTGGTAGCTATAGCACTTTTTTTGCAAGAC
ACTCCTGTCTTAAAACCCACTTGCCTCAATAGGGAAAAAATACTTTTAAA
ATTCCAAAGGAAATAAGAAATCTATTGTTTCTAGGTATATCAAAACGCAA
CTGGGAATGGTTTAAGAGGGGGATTTTTTCCTTTACAATTTCTAATGGGG
ATAAAATCGCAAGCCTATTTCCCAATTGGGTTTAATGTTTCAGGGTATTT
TTCTCCAGCGGAGTGACGCGAATTGTTTCAAGTTTTCCTACCCATGTATA
CTTCTTTGAATTTGACGGGCAATCAACTTTGTTTAAATCCTTTTCCTTAA
GTTTATCTTAAAATAAAACCTCTCCTCTCCAGCACAGAAATTCTAATTAA
AAAAATAAATACACAGGTTGCGAAATTTAAGTCTGAACACAAATCATGTT
TTTACTCGCAATTTTTACGTGCTTGTTACATGACATCTGATTGGTTCGAA
TTTATTGACACCAATAAAGTTATTAGCTGTAACTTTTAAAGCAAGAAACA
TGGGAATAAAATCACGTGAACTTTTTCGAGTAATCACATGTTTTGACTGC
ATTGATATAATTTTGCAGCCCATGGTCAGACCTTAACACATATTTTTCTA
CGAAGCCAGATTTCCATATCTTACTATCCAACTCGAGATTTCCTTAACTC
AAACAAGTTTGTGTCCCTTTCATGCGGGTTCGAACTATTGGGACTCGACC
AGGTAATTTTTCAAACCCTTTTAGCATAAGTTTATTGAACGTTGCTCTTC
CTAAAATCACTAAAGATTTGGTAAAAACAGCCTTTTTAGTGGAAAAAACA
TTTAAAAAAGCGCACTTTTGAACTTCAACGGACGCTACTCTGTTTTTTTA
GAATATGGCCTCTCGACTGTAATTGAAAATATGCATAACACCAATTCCCA
GAAATTGTTTATTTGTTGTTTAAAAAGCCATTTTCCCTTTTTTCCAATAT
CATTTCAGATTCGGATACGAAACCACCTTCAAAGAAACATTCGTCAGGTC
TTCCAGAAATTCGTTTACAATTTGAAGACCAGAACAATGAAAACAAAAAC
AACTACAATTTCCAAGAAGTCACTGAAAAGGTCGAGCCGAAAGACCCTGA
ATTCCTGGACATGTCAGAGCGCATACTAGAAATTCTTCTAGATAACATCC
TTTACGGCTACAAAACCTTGTATCAACGTTCTGATTATTCGAAATTGTTA
TATCGCATCTACGACTTGGTGTCTGAGCGACGGGTCATGAAATTCTTTCT
GCCTGCTTTCCCCGTGAAAAGTTCAAACAAGTTTCAGAAAGTTTTGGGTG
TTGACGTTGATTTTGCAGAGAGCATTGCAATTGATAATCTGATCAAAACT
GCAAGAAAAATTGAAGGTATGTAAAAATCTATAAGTACCTTTCCCTGGGA
CTAAAATAAGCAATTTACAATTACATTTCCTCGGGCGGGGGGGGGGGCTT
TGGCAATTACTTATTTATGTCAAATATGTGTCTTTATCAAGTTTACTAAG
TAGACTATCTAAAAAAAAGAAGTGTAAGTTTTGAGATACAGGTGCAAGAA
AATTTATGATTTTTTTGTGTTGTGTGTTTGCCTTTCAGCAATCTAACCAG
ACTGGTCTTTATAACCACGGAGGGGTAGTCTCTTTAAGAGTCGGGATTTC
TTCTTTTTGTGTCTTTTAAGTGTGAAAAAAAGTATGAAAACAATGAAAGT
GTCTGTTTGAATTCCAGGAATCTATCAAGCTGGTGCTTACATAATCATCA
TGTCTGACTACCATACATTCGATCAATACATTCAAGTGGATGAAGAAAGT
TACAAAATTTACCATGAAGGTCTTAAACAGATGATACATAGTAAAGGAGG
AGATGATGTTATTCAACTCATCTCATTGAGTTACTTCAAACAATTTGATA
GTGTACCTCAGAGGCGTATCTCACAAACCTTAGCTGAGAATTATGGTGGG
AATGCTTTCAGAGCAAGCTTTAGTGAAGAAATTAAACTGAGCCCAACTTT
ATTGCAGAAGTATACACAACAGAAGAAATTCTTTAAGCTCGATTTATCGC
ATTCTTTGAGAAGATCTCCAAACTCAAAACGTAAACAAGTTTTGAAAGAA
GTTGCAACAGGAATGATTTCTCAAGGTAATTGTCTTTTTTTTTTACACTT
ATTAATTCTTACATTTTACAATATCTTGATGTTTTCACCATTTCTTTTAA
CAATATCTGAAAATGGGAAATCTACCAACGTGAAAATAACTTAAAGAATA
GGTGTGAAAAAAATTTTTCTTCCTGGCAGTGAGTTTCAGAGGGTACCCAA
TTCCAACATTCGGTCAATTGTTTGTCCAGTTTCCGTCGCACTGTAAAAAC
GTGGATTGAAATTACACCAACAAAAATTTCTTTGAATGTGAAGTTTTTTT
TATCAAAGTATCACTTTTCTGGTAAAAAAGTTCCTGTGCATTATCAGAAC
TATAATGGTTGATAGTCCTTTTTTTTTGCAGTATGAATTTTCCAGAGAGA
AACTACTGAGCTTTGTCTGGTTTTCGCCATATCCTTTACGAATATCTGAA
AATGGAAAATCTAGCAGCGCGGACATAACTTCAAGAATGGGTGTGCAAAA
TAATTTTTTTCCAAAGTTGAGCTCAAAAGAAAGCTGTTTTCTTGTGTTTA
AAAATTGTACAAACAGTAGGTAACGTCTTTATAAATGATGTTCTTTAATT
TTCATTTGTAGGAGTTGCACTAGATGCCTTCCTTAGCCAACAAAAATGCA
TTGACAATTATGTTCGTCTCAGTATCCACCAGCATCATCCTGAAACCGGA
AAATTTGCTATTGATCTCTTCAAAAATAAGTGTAGGTTGTACGGTGGTAG
CGCCCAGCTTCGGACACCTTGGCATAATACGGTGTTATTCGATACACGGA
CCGGTGAATTCAAAATTGATTTCAAAGAGGCTAACAGAAAAACTAGCGAA
GTGGAAGACAGTCTAACCAGCATGGTTTATTACCGTTCCAAACCTTATTT
TTATGTTAAACTTTACTTGTCTCGTCCATTGAAAGGTGATTATTTGAATC
TGAAGATCTCCATGGCTCGAAACTCATGTGGAATGGTAATTGAAGCTTAT
GAGAGGAGTAAAGTTGGTCCTGATATTTTTACACCTGAAACTATTCTTGC
TTTAACG Coding sequence (CDS) from alignment at sc0000061_pilon:58676..63932- >XLOC_043977 ID=XLOC_043977|Name=XLOC_043977|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2664bp|location=Sequence derived from alignment at sc0000061_pilon:58676..63932- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTTCAAATCAAAGGTTCTTCAGATTATGAAACGACAAAAGAGCAA
AGAAAAACAAAAAAGTTTTGATGTCTTTCAAATCAAAGGTTCTTCAGATT
ATGAAACGACAAAAGAGCAAAGAAAAACAAAAAAGTTTTGATTCGGATAC
GAAACCACCTTCAAAGAAACATTCGTCAGGTCTTCCAGAAATTCGTTTAC
AATTTGAAGACCAGAACAATGAAAACAAAAACAACTACAATTTCCAAGAA
GTCACTGAAAAGGTCGAGCCGAAAGACCCTGAATTCCTGGACATGTCAGA
GCGCATACTAGAAATTCTTCTAGATAACATCCTTTACGGCTACAAAACCT
TGTATCAACGTTCTGATTATTCGAAATTGTTATATCGCATCTACGACTTG
GTGTCTGAGCGACGGGTCATGAAATTCTTTCTGCCTGCTTTCCCCGTGAA
AAGTTCAAACAAGTTTCAGAAAGTTTTGGGTGTTGACGTTGATTTTGCAG
AGAGCATTGCAATTGATAATCTGATCAAAACTGCAAGAAAAATTGAAGAT
TCGGATACGAAACCACCTTCAAAGAAACATTCGTCAGGTCTTCCAGAAAT
TCGTTTACAATTTGAAGACCAGAACAATGAAAACAAAAACAACTACAATT
TCCAAGAAGTCACTGAAAAGGTCGAGCCGAAAGACCCTGAATTCCTGGAC
ATGTCAGAGCGCATACTAGAAATTCTTCTAGATAACATCCTTTACGGCTA
CAAAACCTTGTATCAACGTTCTGATTATTCGAAATTGTTATATCGCATCT
ACGACTTGGTGTCTGAGCGACGGGTCATGAAATTCTTTCTGCCTGCTTTC
CCCGTGAAAAGTTCAAACAAGTTTCAGAAAGTTTTGGGTGTTGACGTTGA
TTTTGCAGAGAGCATTGCAATTGATAATCTGATCAAAACTGCAAGAAAAA
TTGAAGGAATCTATCAAGCTGGTGCTTACATAATCATCATGTCTGACTAC
CATACATTCGATCAATACATTCAAGTGGATGAAGAAAGTTACAAAATTTA
CCATGAAGGTCTTAAACAGATGATACATAGTAAAGGAGGAGATGATGTTA
TTCAACTCATCTCATTGAGTTACTTCAAACAATTTGATAGTGTACCTCAG
AGGCGTATCTCACAAACCTTAGCTGAGAATTATGGTGGGAATGCTTTCAG
AGCAAGCTTTAGTGAAGAAATTAAACTGAGCCCAACTTTATTGCAGAAGT
ATACACAACAGAAGAAATTCTTTAAGCTCGATTTATCGCATTCTTTGAGA
AGATCTCCAAACTCAAAACGTAAACAAGTTTTGAAAGAAGTTGCAACAGG
AATGATTTCTCAAGGAATCTATCAAGCTGGTGCTTACATAATCATCATGT
CTGACTACCATACATTCGATCAATACATTCAAGTGGATGAAGAAAGTTAC
AAAATTTACCATGAAGGTCTTAAACAGATGATACATAGTAAAGGAGGAGA
TGATGTTATTCAACTCATCTCATTGAGTTACTTCAAACAATTTGATAGTG
TACCTCAGAGGCGTATCTCACAAACCTTAGCTGAGAATTATGGTGGGAAT
GCTTTCAGAGCAAGCTTTAGTGAAGAAATTAAACTGAGCCCAACTTTATT
GCAGAAGTATACACAACAGAAGAAATTCTTTAAGCTCGATTTATCGCATT
CTTTGAGAAGATCTCCAAACTCAAAACGTAAACAAGTTTTGAAAGAAGTT
GCAACAGGAATGATTTCTCAAGGAGTTGCACTAGATGCCTTCCTTAGCCA
ACAAAAATGCATTGACAATTATGTTCGTCTCAGTATCCACCAGCATCATC
CTGAAACCGGAAAATTTGCTATTGATCTCTTCAAAAATAAGTGTAGGTTG
TACGGTGGTAGCGCCCAGCTTCGGACACCTTGGCATAATACGGTGTTATT
CGATACACGGACCGGTGAATTCAAAATTGATTTCAAAGAGGCTAACAGAA
AAACTAGCGAAGTGGAAGACAGTCTAACCAGCATGGTTTATTACCGTTCC
AAACCTTATTTTTATGTTAAACTTTACTTGTCTCGTCCATTGAAAGGTGA
TTATTTGAATCTGAAGATCTCCATGGCTCGAAACTCATGTGGAATGGTAA
TTGAAGCTTATGAGAGGAGTAAAGTTGGTCCTGATATTTTTACACCTGAA
ACTATTCTTGCTTTAACGGAGTTGCACTAGATGCCTTCCTTAGCCAACAA
AAATGCATTGACAATTATGTTCGTCTCAGTATCCACCAGCATCATCCTGA
AACCGGAAAATTTGCTATTGATCTCTTCAAAAATAAGTGTAGGTTGTACG
GTGGTAGCGCCCAGCTTCGGACACCTTGGCATAATACGGTGTTATTCGAT
ACACGGACCGGTGAATTCAAAATTGATTTCAAAGAGGCTAACAGAAAAAC
TAGCGAAGTGGAAGACAGTCTAACCAGCATGGTTTATTACCGTTCCAAAC
CTTATTTTTATGTTAAACTTTACTTGTCTCGTCCATTGAAAGGTGATTAT
TTGAATCTGAAGATCTCCATGGCTCGAAACTCATGTGGAATGGTAATTGA
AGCTTATGAGAGGAGTAAAGTTGGTCCTGATATTTTTACACCTGAAACTA
TTCTTGCTTTAACG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061_pilon | genome | sc0000061_pilon:58676..63932 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 889-1332:445 |
| Aaloc | 481-885:1439 |
| Aaloc | 73-477:2198 |
| Aaloc | 1-69:5258 |
|
