XLOC_043972 (mRNA) -

Overview
NameXLOC_043972
Unique NameXLOC_043972
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:4077237..4078109+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043972 ID=XLOC_043972|Name=XLOC_043972|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=873bp|location=Sequence derived from alignment at sc0000001_pilon:4077237..4078109+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAACCCTAAAAGACCAATAGGGACTGCAAGCCCTAACACCATCAA TGCAGTTGTGCCTATGTGTACAAACCAAAGTAGCTCATCAAAGCATGGTA GTTCTAGTCCAAACAACCCTGATTTGGCATCATTATTTGAATgtccagtt tgttttgattatgtTTTACCGCCAATTTTCCAATGTAGCAGTGGGCATTT AGTATGTTCAAATTGTCGGCCAAAATTGGCAGGAATCTGTCCAACATGTA GAGGACCTTTAGGGAGTATTCGTAATTTGGCAATGGAAAAAGTTGCAAAT ACTGTTTTGTTTCCATGCCGTTATGCAAATAATGGATGTATTGTTGCTTT ACCACATACACAGAAAAGTGAACACGAAGAAGGGTGTGAGTTTCGTCCTT ATGCTTGTCCTTGTCCTGGAGCATCATGCAAATGGCAAGGTTCTTTAGAT GCAGTCATGCCTCATTTAGTACATGCACACAAGTCAATAACAACATTACA GGGTgaagatattgtatttttagcGACAGACATTAATTTACCAGGTGCGG TTGATTGGGTTATGATGCAATCATGTTTTGGCCATCACTTCATGTTGGTC CTGGAAAAACAAGAACGATTTGAAGGACATCAACAATTTTTTGCTGTGGT TCAACTGATAGGGAGCCGAaaacaagctgaaaattttgcttACAGACTTG AATTGAATGGCCGTCGAAGGAGGCTTGCATGGGAAGCTACCCCAAGAAGC ATCCATGATGGGATCCAATCAGCAATCATTAATAGTGATTGCCTGGTGTT TGATACCAGCATTGCTCAATTATTTGCTGAAGCTGGTAATCTTGGCATTA ATGTGACTATCTCAATGTGTTGA

Coding sequence (CDS) from alignment at sc0000001_pilon:4077237..4078109+

>XLOC_043972 ID=XLOC_043972|Name=XLOC_043972|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000001_pilon:4077237..4078109+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAACCCTAAAAGACCAATAGGGACTGCAAGCCCTAACACCATCAA
TGCAGTTGTGCCTATGTGTACAAACCAAAGTAGCTCATCAAAGCATGGTA
GTTCTAGTCCAAACAACCCTGATTTGGCATCATTATTTGAATgtccagtt
tgttttgattatgtTTTACCGCCAATTTTCCAATGTAGCAGTGGGCATTT
AGTATGTTCAAATTGTCGGCCAAAATTGGCAGGAATCTGTCCAACATGTA
GAGGACCTTTAGGGAGTATTCGTAATTTGGCAATGGAAAAAGTTGCAAAT
ACTGTTTTGTTTCCATGCCGTTATGCAAATAATGGATGTATTGTTGCTTT
ACCACATACACAGAAAAGTGAACACGAAGAAGGGTGTGAGTTTCGTCCTT
ATGCTTGTCCTTGTCCTGGAGCATCATGCAAATGGCAAGGTTCTTTAGAT
GCAGTCATGCCTCATTTAGTACATGCACACAAGTCAATAACAACATTACA
GGGTgaagatattgtatttttagcGACAGACATTAATTTACCAGGTGCGG
TTGATTGGGTTATGATGCAATCATGTTTTGGCCATCACTTCATGTTGGTC
CTGGAAAAACAAGAACGATTTGAAGGACATCAACAATTTTTTGCTGTGGT
TCAACTGATAGGGAGCCGAaaacaagctgaaaattttgcttACAGACTTG
AATTGAATGGCCGTCGAAGGAGGCTTGCATGGGAAGCTACCCCAAGAAGC
ATCCATGATGGGATCCAATCAGCAATCATTAATAGTGATTGCCTGGTGTT
TGATACCAGCATTGCTCAATTATTTGCTGAAGCTGGTAATCTTGGCATTA
ATGTGACTATCTCAATGTGTTGAATGGCTAACCCTAAAAGACCAATAGGG
ACTGCAAGCCCTAACACCATCAATGCAGTTGTGCCTATGTGTACAAACCA
AAGTAGCTCATCAAAGCATGGTAGTTCTAGTCCAAACAACCCTGATTTGG
CATCATTATTTGAATgtccagtttgttttgattatgtTTTACCGCCAATT
TTCCAATGTAGCAGTGGGCATTTAGTATGTTCAAATTGTCGGCCAAAATT
GGCAGGAATCTGTCCAACATGTAGAGGACCTTTAGGGAGTATTCGTAATT
TGGCAATGGAAAAAGTTGCAAATACTGTTTTGTTTCCATGCCGTTATGCA
AATAATGGATGTATTGTTGCTTTACCACATACACAGAAAAGTGAACACGA
AGAAGGGTGTGAGTTTCGTCCTTATGCTTGTCCTTGTCCTGGAGCATCAT
GCAAATGGCAAGGTTCTTTAGATGCAGTCATGCCTCATTTAGTACATGCA
CACAAGTCAATAACAACATTACAGGGTgaagatattgtatttttagcGAC
AGACATTAATTTACCAGGTGCGGTTGATTGGGTTATGATGCAATCATGTT
TTGGCCATCACTTCATGTTGGTCCTGGAAAAACAAGAACGATTTGAAGGA
CATCAACAATTTTTTGCTGTGGTTCAACTGATAGGGAGCCGAaaacaagc
tgaaaattttgcttACAGACTTGAATTGAATGGCCGTCGAAGGAGGCTTG
CATGGGAAGCTACCCCAAGAAGCATCCATGATGGGATCCAATCAGCAATC
ATTAATAGTGATTGCCTGGTGTTTGATACCAGCATTGCTCAATTATTTGC
TGAAGCTGGTAATCTTGGCATTAATGTGACTATCTCAATGTGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043972XLOC_043972-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:4077237..4078109 +
Properties
Property NameValue
Aaloc1-873:1