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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:4135874..4139551+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043969 ID=XLOC_043969|Name=XLOC_043969|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3678bp|location=Sequence derived from alignment at sc0000001_pilon:4135874..4139551+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCCGAACAACGGAAAGTAGCTCCAGTTCTCCATATCTTCCACAAGA
ATCACCAAATGAAGTGCCACATCTACCAAAAATGTTAGCAATGACAagtg
ctgagtcatcaaaatcAGAAAACGTTCCAGCGCTTATTCAAGCAGATGCC
AACTCGAATTATCAGGCAGCACAGCAAGCAGTACAGGTGACGTCATCAGT
GGTTCACGCTCATCAGATTATTCATCCCCTTGTTAACTCAATACCACACC
CACTTCCACCACCACCATCCTCTGTAGGGCCACCGGGAAGCCACCAACAA
GCACAGGTGAATTGATCtttttttcaagggttttgctttgttttttgatA
GGCTGGAAAATGAGAAATTAACTCAAGCGAATTTTAGATCTTAGCCTggc
gaattcttagcaagcccATTGTATTTATCAGCGTGAGTATGTCGGtacaa
aaatattgataaaaaacggGTTGTCCAAAACAATGTTTTAAAAACTAATG
GATATTGTTTTGAGGATGAAAATTACATGAGTGTAATAGTAAAGAGTGTA
TCTTTCAGAAAATAGCAATATATTCACCGAAAGAGTGGCATAGGATGAAA
TACCACTTTTTATGTCACCCGAAATCGAAAATCGTGGAATTCTTcatcct
ttttggacctaccgggaggtcctttaatttgaccgttgtccgttcgtctg
ttacaagcttttctcgggattggctcattagttttttttaattttttgca
caatgatacaaaatagcaatgcctgaaaagtgacggagcccgatttttga
aaaaaaaatttggggtgcaaatttgggccaaaatctacctaaaaataagg
ttttttggacttggtgcaaaattgcttcattagtttttcctgatttttgg
cagaaatatagagtgcaaggtaccctaaaatgtggctgaagtaatttttc
tcggaaaattttttttcgtcgtaaaatacggattttcgttttttggggaa
attcccttttaccattttcctgttagcagcttttctcgggattggctcat
tagttttttttaattttttgcacaatgatacaaaatagcaatgcctaaaa
attgacggagcccgatttttgaaaaaaaaaatttggggggcaaatttggg
ccaaaaactacctaaaataaggttttttggactttgtgcaaaattgcttc
attagtttttcctgatttttggcagaaagatggagagcaaggttctctaa
aaagtgactgaagcagtttttttcggaaaattttttttggccgtaaaaat
cagtttttcttatttggggaaattcccttatgtcatttttagggaaaaag
agcgtTTCTGGCGATTGGatcgatatttttttctgattttttgtactttg
atgTAATATGGTAATACTTAAAATCTGATGAagtcctattttcaaaaaat
aattttttggggcaaatttgggccaacatgtgccaaaaaatggggttttt
tggactttgtgtgaaattgcttcattagttttttcaaattatatctAAAA
CGTAACTCAAGcttttttttccggaaaaatttttttggctgtaaaaatcg
gattttcttatttggggaaactcccttttgtcatatttagggaaaatgag
catttctagaGATTGgcttggtgtttttttcttattttttgcatagtgct
ataatatggtaatatttaatttctgatggagcctgattttcgaaaaaata
attttttgagcaaatttgggcagAAAAGTTCCTATATTCAAGCTGCTAAt
tacactttcttactctcttgctatttgtcctacttttatctgattttgat
caccaggtaggtccattcagcatgttgcttgttactccttaaatttaaat
ttgaaaatttatggtATCAACAATAGATTTCCGAAGGGTTTAGATGATAA
AACCGTTTTAAAAATTGCTGtagtaaaaatcagaaaatcttgaatttctG
GACTATTTCATCCCAAATTACTCCGAAACCTATATCATTGGAATCTTCGT
GgaaaaatacttcatttttgaaaataaggtCTCAAAATTCCTAACATTAA
AGTTCAAGAGTTCTTTTGATTTGGAGACGTACGATAAACCTCCTCCAATC
TGATCTTAAAAATGCCAAGAATTTTTGCAAAGAAATTAGGATTTTCCAGA
CAAAATCTGTGCACCCATGTTGAGGAGGCCCATTACCGTTCCATGGGGAT
AGGTTCTGAAATGCAGTGTCCATAtgagtaaaaattgaaaatctgtaAAG
TTTCAGAATTCCAGAGAGTAATGATTCTGTAATTGCCTCAAATTCCAAGG
CGGTAGGTCACAAAAAAGTAGACCTCGTCAACAGAGGGGGTACATGTTTT
CTTTTGCTAGAAAAGCTAATTGGGCAGtcgaccccctggacattcaaaat
taccctcaaacagagcaagtttacccccggacaaggcaaattttgtagat
ttttcactacccccggtaGACTGGAgccgtttataatgcgtgtaatacta
ataataccaatactaataataataataatacgggatttagtttgtataaa
cgactggaagaatccggtgttccagccttatagatacaggggctagctac
gcagaaacttgcgtagcgagaaaacaatttatcaagcaacaacaaacttt
taaaacgaaatcaactcaaatgaaaaactttcaatacacaaatccacaca
tattttttttctcaagaattattttgagcaagaaaaaattataattgcaa
tattgacacttttcttttgtttggagttagtgcacaaaggtttctagacg
actaaaattgttccattcattactttttgctttatttctactatgtataa
attagtcgtctagcttgctagactatacCCCCGGCCACTATATCCTCCAT
CCAcccccccATgcacgaacattttctggaagagcctattGTGTAATCTT
TGAattctttaaaaatgttttcaggTTGAGGAGGATGATGACCATGTGAA
GCGACCAATGAATGCTTTCATGGTATGGTCACGAACAGAGCGACGAAAAC
TGGCACTCAAATTCCCAAATATGTTAAATTGTGAAATCTCCAAATTATTG
GGCGCTGAATGGTCTCGTATGTCTGACGAGGATAAATCACCTTATGTTCA
AGAAAGCAAAAGATTAAGGACAATTCACAGTCAAAAATATCCCGATTACT
CTTACAAACCAAGACGGAGGAAACGAAAAACGCAACAAAGCCAACCGCCC
TATCCATCAATTAACTTCCAAAGTGCATCCGCCAACATCCCACCACCCTA
CCAATATCCACCTGCAGCAGGATTCGCAAAAATCTCATCAGATGCATTTA
AAATGTCCAGCTTTGGTGGTGGTGAAAGTGGCTTTCCAGTACCGCCCCTT
AACGATCCAGGAAAAGCACTCAGCTATCTTAATTCAGCTGCCGCCATTGG
ATTACCAGATATGAAATCATACTACAGTCTCGCACCGCCCAATCCAAATC
TCTTTCCGCCCTCCTCGTCAAACAGCTATACCTCACTGTCATTGACTGGG
AACACACCAACTAACTTATATTCGTCCTCCAATACTTACATGCCAGCCAT
GTTTAAGGACGGACCAAGCCATTACTGA Coding sequence (CDS) from alignment at sc0000001_pilon:4135874..4139551+ >XLOC_043969 ID=XLOC_043969|Name=XLOC_043969|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000001_pilon:4135874..4139551+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCCGAACAACGGAAAGTAGCTCCAGTTCTCCATATCTTCCACAAGA
ATCACCAAATGAAGTGCCACATCTACCAAAAATGTTAGCAATGACAagtg
ctgagtcatcaaaatcAGAAAACGTTCCAGCGCTTATTCAAGCAGATGCC
AACTCGAATTATCAGGCAGCACAGCAAGCAGTACAGGTGACGTCATCAGT
GGTTCACGCTCATCAGATTATTCATCCCCTTGTTAACTCAATACCACACC
CACTTCCACCACCACCATCCTCTGTAGGGCCACCGGGAAGCCACCAACAA
GCACAGATGATCCGAACAACGGAAAGTAGCTCCAGTTCTCCATATCTTCC
ACAAGAATCACCAAATGAAGTGCCACATCTACCAAAAATGTTAGCAATGA
CAagtgctgagtcatcaaaatcAGAAAACGTTCCAGCGCTTATTCAAGCA
GATGCCAACTCGAATTATCAGGCAGCACAGCAAGCAGTACAGGTGACGTC
ATCAGTGGTTCACGCTCATCAGATTATTCATCCCCTTGTTAACTCAATAC
CACACCCACTTCCACCACCACCATCCTCTGTAGGGCCACCGGGAAGCCAC
CAACAAGCACAGgTTGAGGAGGATGATGACCATGTGAAGCGACCAATGAA
TGCTTTCATGGTATGGTCACGAACAGAGCGACGAAAACTGGCACTCAAAT
TCCCAAATATGTTAAATTGTGAAATCTCCAAATTATTGGGCGCTGAATGG
TCTCGTATGTCTGACGAGGATAAATCACCTTATGTTCAAGAAAGCAAAAG
ATTAAGGACAATTCACAGTCAAAAATATCCCGATTACTCTTACAAACCAA
GACGGAGGAAACGAAAAACGCAACAAAGCCAACCGCCCTATCCATCAATT
AACTTCCAAAGTGCATCCGCCAACATCCCACCACCCTACCAATATCCACC
TGCAGCAGGATTCGCAAAAATCTCATCAGATGCATTTAAAATGTCCAGCT
TTGGTGGTGGTGAAAGTGGCTTTCCAGTACCGCCCCTTAACGATCCAGGA
AAAGCACTCAGCTATCTTAATTCAGCTGCCGCCATTGGATTACCAGATAT
GAAATCATACTACAGTCTCGCACCGCCCAATCCAAATCTCTTTCCGCCCT
CCTCGTCAAACAGCTATACCTCACTGTCATTGACTGGGAACACACCAACT
AACTTATATTCGTCCTCCAATACTTACATGCCAGCCATGTTTAAGGACGG
ACCAAGCCATTACTGAgTTGAGGAGGATGATGACCATGTGAAGCGACCAA
TGAATGCTTTCATGGTATGGTCACGAACAGAGCGACGAAAACTGGCACTC
AAATTCCCAAATATGTTAAATTGTGAAATCTCCAAATTATTGGGCGCTGA
ATGGTCTCGTATGTCTGACGAGGATAAATCACCTTATGTTCAAGAAAGCA
AAAGATTAAGGACAATTCACAGTCAAAAATATCCCGATTACTCTTACAAA
CCAAGACGGAGGAAACGAAAAACGCAACAAAGCCAACCGCCCTATCCATC
AATTAACTTCCAAAGTGCATCCGCCAACATCCCACCACCCTACCAATATC
CACCTGCAGCAGGATTCGCAAAAATCTCATCAGATGCATTTAAAATGTCC
AGCTTTGGTGGTGGTGAAAGTGGCTTTCCAGTACCGCCCCTTAACGATCC
AGGAAAAGCACTCAGCTATCTTAATTCAGCTGCCGCCATTGGATTACCAG
ATATGAAATCATACTACAGTCTCGCACCGCCCAATCCAAATCTCTTTCCG
CCCTCCTCGTCAAACAGCTATACCTCACTGTCATTGACTGGGAACACACC
AACTAACTTATATTCGTCCTCCAATACTTACATGCCAGCCATGTTTAAGG
ACGGACCAAGCCATTACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:4135874..4139551 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 307-960:3025 |
| Aaloc | 1-306:1 |
|
