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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:4241679..4243407+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043964 ID=XLOC_043964|Name=XLOC_043964|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1729bp|location=Sequence derived from alignment at sc0000001_pilon:4241679..4243407+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacatCAACGAAAAACAAAGCATTACGAGACGTACCACACCAGTGGTG
GAAAATCAGTCTTTTCAATCTCATCCAGCTCAAACTGAACGGATGGGATT
TCTTCCAACAACAAATAGAAAAACACCAGAGTACTGTATTCTGTGCCAAA
ATATTCAACGATTGGACAACGTTTGTGTGTGACCATGTAGCTGTTGCTGC
TGTATTGGACATGACCAAAACGGAGAGAAGCAAAACCGGCCATGGTTTCT
TGGAGCTACGTCCAGAAATGATGTTAGGTCAAACGCCTTGTGTGTTCAGT
GTTGGCGAAGGTCATCAAATACACAAACCATTTATCATGAATTTCGTTGC
TAAGAGTTACGAGAAACAAAAACCCAACATGGTAGCCATAATTGAGAAAG
AATTCAAGGTACTCAGTAAACATGGTATGGGCGATGCTTCATCTGTGGAT
TGGGAAGGAATGTTTTCGACTGCAGCTAAACGAGTTATTTGTCACATGTT
GTTGGGTGTCCACATTGAAGACATTACACCTCTCGAGAAATATACACAAG
GTAAGTTCAAAAGAGCACGCACAATGCATTGTTTTGCCACCAAACATCTA
TAGTTATATAGTAACTGAGcttgcacacaacgttatttcaacattcatct
aacgttatatggacgttgtgaacattagataaaggTTGAAagtcaggaag
aaaagacacttttttattctgctactggcagtttcatgccactttggtga
caatcttcaggcaactcaaataaataaaataaaggtCAAAAgaacgttgc
gtgccagctgggcaACTTCAGGTACTTGGTGAGACCCCAACGAGTTGGCT
TCAAACCAGCCAACTTGATCATTGATAAAATTGTAAGCTTGTATGTTGAT
CCTGACCAATGGGAAGGTAGATACTGGCTTCAATCAGTAATTAAAAGCAT
TTTCATCTCTCTCTTTTACAAAAGGTATGTTAACTATGGAAAAAATGCCT
GGGGAAGCCGACACCTTGATCGAAAACATCATGACGATCTTCAACAAAGT
GGATTCAATAAAAAATCTATCTATCCAATTCTCAAACAGCGGGTTGACCC
AAGAAGAAATGTTCAAAGACATCTGCTATGTAGTATGTCTGGATGCCAGC
AACGCTATTACAATCTTCGTTCTCAATTCATTGTATTGCTACCTGAGATT
ATCCAGCAATGACAAGCAACTGCTGAGAACAGAAGCTGATCAATATTTCA
AGGATCCAGAACAAACCAATCTATCAGCATTACCAAATCTCCATAAATTC
TTCACTGAAATGCTACGTTGGTCATCTAAAGCTTTCATTTATGGTAAAGC
GAAATCCGATTTCCAGCTCGATTCAACATCGGGGAAATTCCGGATTAACA
AAGGAGACTTGTTATGCGCGCTACCTTACTTCATACACCGGGATGATCAA
CTTTTCGAGAATCCCGAGCAATTTGATATGCACCGAAACCCGGAAGAGTC
CGAAAAATACAACTTCACCTACGGTGGTCGTTTTCTCGGACAATCTACAC
CGAGCAACCATAGATGTGCTGGATTCTCTCTTTCCAGAGATGTTGTCAAA
ACGTTTATTCTCTTTTTCACTCGTTGCCAATTCGAACAGATCGGGGTGAC
CGAATGGACTGGAGGAAAAATTTCACGAAAATATGCAAGTGATGAGCCGC
TCAAATTATCCtctttcaaatttgaataa Coding sequence (CDS) from alignment at sc0000001_pilon:4241679..4243407+ >XLOC_043964 ID=XLOC_043964|Name=XLOC_043964|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2610bp|location=Sequence derived from alignment at sc0000001_pilon:4241679..4243407+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacatCAACGAAAAACAAAGCATTACGAGACGTACCACACCAGTGGTG
GAAAATCAGTCTTTTCAATCTCATCCAGCTCAAACTGAACGGATGGGATT
TCTTCCAACAACAAATAGAAAAACACCAGAGTACTGTATTCTGTGCCAAA
ATATTCAACGATTGGACAACGTTTGTGTGTGACCATGTAGCTGTTGCTGC
TGTATTGGACATGACCAAAACGGAGAGAAGCAAAACCGGCCATGGTTTCT
TGGAGCTACGTCCAGAAATGATGTTAGGTCAAACGCCTTGTGTGTTCAGT
GTTGGCGAAGGTCATCAAATACACAAACCATTTATCATGAATTTCGTTGC
TAAGAGTTACGAGAAACAAAAACCCAACATGGTAGCCATAATTGAGAAAG
AATTCAAGGTACTCAGTAAACATGGTATGGGCGATGCTTCATCTGTGGAT
TGGGAAGGAATGTTTTCGACTGCAGCTAAACGAGTTATTTGTCACATGTT
GTTGGGTGTCCACATTGAAGACATTACACCTCTCGAGAAATATACACAAG
atgacatCAACGAAAAACAAAGCATTACGAGACGTACCACACCAGTGGTG
GAAAATCAGTCTTTTCAATCTCATCCAGCTCAAACTGAACGGATGGGATT
TCTTCCAACAACAAATAGAAAAACACCAGAGTACTGTATTCTGTGCCAAA
ATATTCAACGATTGGACAACGTTTGTGTGTGACCATGTAGCTGTTGCTGC
TGTATTGGACATGACCAAAACGGAGAGAAGCAAAACCGGCCATGGTTTCT
TGGAGCTACGTCCAGAAATGATGTTAGGTCAAACGCCTTGTGTGTTCAGT
GTTGGCGAAGGTCATCAAATACACAAACCATTTATCATGAATTTCGTTGC
TAAGAGTTACGAGAAACAAAAACCCAACATGGTAGCCATAATTGAGAAAG
AATTCAAGGTACTCAGTAAACATGGTATGGGCGATGCTTCATCTGTGGAT
TGGGAAGGAATGTTTTCGACTGCAGCTAAACGAGTTATTTGTCACATGTT
GTTGGGTGTCCACATTGAAGACATTACACCTCTCGAGAAATATACACAAG
GTATGTTAACTATGGAAAAAATGCCTGGGGAAGCCGACACCTTGATCGAA
AACATCATGACGATCTTCAACAAAGTGGATTCAATAAAAAATCTATCTAT
CCAATTCTCAAACAGCGGGTTGACCCAAGAAGAAATGTTCAAAGACATCT
GCTATGTAGTATGTCTGGATGCCAGCAACGCTATTACAATCTTCGTTCTC
AATTCATTGTATTGCTACCTGAGATTATCCAGCAATGACAAGCAACTGCT
GAGAACAGAAGCTGATCAATATTTCAAGGATCCAGAACAAACCAATCTAT
CAGCATTACCAAATCTCCATAAATTCTTCACTGAAATGCTACGTTGGTCA
TCTAAAGCTTTCATTTATGGTAAAGCGAAATCCGATTTCCAGCTCGATTC
AACATCGGGGAAATTCCGGATTAACAAAGGAGACTTGTTATGCGCGCTAC
CTTACTTCATACACCGGGATGATCAACTTTTCGAGAATCCCGAGCAATTT
GATATGCACCGAAACCCGGAAGAGTCCGAAAAATACAACTTCACCTACGG
TGGTCGTTTTCTCGGACAATCTACACCGAGCAACCATAGATGTGCTGGAT
TCTCTCTTTCCAGAGATGTTGTCAAAACGTTTATTCTCTTTTTCACTCGT
TGCCAATTCGAACAGATCGGGGTGACCGAATGGACTGGAGGAAAAATTTC
ACGAAAATATGCAAGTGATGAGCCGCTCAAATTATCCtctttcaaatttg
aataaGTATGTTAACTATGGAAAAAATGCCTGGGGAAGCCGACACCTTGA
TCGAAAACATCATGACGATCTTCAACAAAGTGGATTCAATAAAAAATCTA
TCTATCCAATTCTCAAACAGCGGGTTGACCCAAGAAGAAATGTTCAAAGA
CATCTGCTATGTAGTATGTCTGGATGCCAGCAACGCTATTACAATCTTCG
TTCTCAATTCATTGTATTGCTACCTGAGATTATCCAGCAATGACAAGCAA
CTGCTGAGAACAGAAGCTGATCAATATTTCAAGGATCCAGAACAAACCAA
TCTATCAGCATTACCAAATCTCCATAAATTCTTCACTGAAATGCTACGTT
GGTCATCTAAAGCTTTCATTTATGGTAAAGCGAAATCCGATTTCCAGCTC
GATTCAACATCGGGGAAATTCCGGATTAACAAAGGAGACTTGTTATGCGC
GCTACCTTACTTCATACACCGGGATGATCAACTTTTCGAGAATCCCGAGC
AATTTGATATGCACCGAAACCCGGAAGAGTCCGAAAAATACAACTTCACC
TACGGTGGTCGTTTTCTCGGACAATCTACACCGAGCAACCATAGATGTGC
TGGATTCTCTCTTTCCAGAGATGTTGTCAAAACGTTTATTCTCTTTTTCA
CTCGTTGCCAATTCGAACAGATCGGGGTGACCGAATGGACTGGAGGAAAA
ATTTCACGAAAATATGCAAGTGATGAGCCGCTCAAATTATCCtctttcaa
atttgaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:4241679..4243407 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 553-1305:977 |
| Aaloc | 1-549:1 |
|
