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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:4369559..4371220- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043962 ID=XLOC_043962|Name=XLOC_043962|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1662bp|location=Sequence derived from alignment at sc0000001_pilon:4369559..4371220- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTAATAATAGAAAATATACAAACAAGTGATGTCATTAGAGATAA
AGAATCGTCTGGTAAATTCGATTTTCCAATCACAATCAAATTTGACATCA
AATTGGATGGTGAAATAATTGGTAACTTTGATTTATGTGTTGAAAGTTCT
ACAAAATCTATCAAAATGTCGGATAGCAAGAGAAATCACTTTCATTTCAT
TCCAAAGAAACGTTCATCAGAAGACAACCCGGTTCTAAAGACCGTTCCGA
TTGCTGATATCGTCATCAAACCAAAAATGCCAAGCATTGCAACGATGATA
AACACACAGTATCAACCTTTACCATCGAATCAATCAAATCAATTTCATAA
AAATTTGATTGATCAACTCCAAGCAGTCACTTGCCATCTTAAGAAAAAGA
AAGGATTAAAAACTACACCGATTCAAATTTTGCAGCAAAGGCGTCTAAAT
ATTGCACCAAAACCAATAACAACACAAAATGAGGAGAAAAACACAATCGA
TCTTCAAATTATTGAATCAAACAATGATTTAATGGAAAAATCGAAATGTG
TAGTTTGTAAAAAACCTGTGAAGAACCCAGACAGCATCAATCGATTAACC
AGCACATTTAATGTCAACAAAGAAGTCAAATGCATTAAATGCATTACAAT
CTTTGAAAGCACAAAATTAAATAATGAAAAACAGAAAGACCTTTTGCGTG
TTAATATTGGAGTGAAGATACCTAAGCCTAAGATTATAAAAGAATTTAAA
TGTCAAGAATGTGGTAAGATCCTTATGGATGGTGGTAGTTTATTAGCGCA
CGAGAATGCTCATAAAGGAATCACACCATTTGAATGCGAAGTTTGTGGAA
AGTGTTTTCCAGGAAAGAATAATCTGAGAATGCACTTGAAAATCCATCGA
GATGAACATAGCTGTCAAGAATGTGGTGGGATTTTTACCTCAAAGAGCGA
TCTTATAAAACACAACCGATCCGCCCATCAAGGAACTGCACCTTTTGAAT
GCGAAGAGTGTGGAAAGGATTTTCCAAAAAAGGCCCACCTGAGAGTGCAT
AAAAGGATCCATGCAAAAGAATTTAATTGTACAGAGTGTGAAAGAAGTTT
TGCCTTAAAAAGTGAGCTAACATTACATTTTCAAGTGACACATCAGGGAA
TCAAATCATTTCAGTGTAATGATTGTGGTAAAATGTTTGCCAGAAAATTT
ACACTTCAACTACATGCAGCTACTCATTCAGGAATCAAACCATTTCATTG
TGAAAGATGTGACAAATATTTCAGTACTGAATGGCATTTGAAGAAACATG
TCAGAATCCATAATGGAAAAATAAAAAAGAATCATCATTGTGAACACTGC
GATAGATATTTTGTTTCTGGTGCTGACTTGAAAGACCATAAAAACAGCCA
CACTGGAAATAGACCATATGAGTGCAAAGCTTGTGGTAAATCATTTTCAC
GAAGGGACGCTTTCTATACACATAAGCAGAGTCATAATACAATTGAATGT
TTTGAATGTCAAGAATGTGGTAAAAGCTTTACAACAAAACGCAAACTTAC
TGTTCATGGATACAAGCACCGAACTGACAAACCCTTTAAATGTACGGTGT
GTGGTAATTGCTATACACACAATTATATTCTCACGAAACATATCAAACAA
AGCCATCATTAA Coding sequence (CDS) from alignment at sc0000001_pilon:4369559..4371220- >XLOC_043962 ID=XLOC_043962|Name=XLOC_043962|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3324bp|location=Sequence derived from alignment at sc0000001_pilon:4369559..4371220- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTAATAATAGAAAATATACAAACAAGTGATGTCATTAGAGATAA
AGAATCGTCTGGTAAATTCGATTTTCCAATCACAATCAAATTTGACATCA
AATTGGATGGTGAAATAATTGGTAACTTTGATTTATGTGTTGAAAGTTCT
ACAAAATCTATCAAAATGTCGGATAGCAAGAGAAATCACTTTCATTTCAT
TCCAAAGAAACGTTCATCAGAAGACAACCCGGTTCTAAAGACCGTTCCGA
TTGCTGATATCGTCATCAAACCAAAAATGCCAAGCATTGCAACGATGATA
AACACACAGTATCAACCTTTACCATCGAATCAATCAAATCAATTTCATAA
AAATTTGATTGATCAACTCCAAGCAGTCACTTGCCATCTTAAGAAAAAGA
AAGGATTAAAAACTACACCGATTCAAATTTTGCAGCAAAGGCGTCTAAAT
ATTGCACCAAAACCAATAACAACACAAAATGAGGAGAAAAACACAATCGA
TCTTCAAATTATTGAATCAAACAATGATTTAATGGAAAAATCGAAATGTG
TAGTTTGTAAAAAACCTGTGAAGAACCCAGACAGCATCAATCGATTAACC
AGCACATTTAATGTCAACAAAGAAGTCAAATGCATTAAATGCATTACAAT
CTTTGAAAGCACAAAATTAAATAATGAAAAACAGAAAGACCTTTTGCGTG
TTAATATTGGAGTGAAGATACCTAAGCCTAAGATTATAAAAGAATTTAAA
TGTCAAGAATGTGGTAAGATCCTTATGGATGGTGGTAGTTTATTAGCGCA
CGAGAATGCTCATAAAGGAATCACACCATTTGAATGCGAAGTTTGTGGAA
AGTGTTTTCCAGGAAAGAATAATCTGAGAATGCACTTGAAAATCCATCGA
GATGAACATAGCTGTCAAGAATGTGGTGGGATTTTTACCTCAAAGAGCGA
TCTTATAAAACACAACCGATCCGCCCATCAAGGAACTGCACCTTTTGAAT
GCGAAGAGTGTGGAAAGGATTTTCCAAAAAAGGCCCACCTGAGAGTGCAT
AAAAGGATCCATGCAAAAGAATTTAATTGTACAGAGTGTGAAAGAAGTTT
TGCCTTAAAAAGTGAGCTAACATTACATTTTCAAGTGACACATCAGGGAA
TCAAATCATTTCAGTGTAATGATTGTGGTAAAATGTTTGCCAGAAAATTT
ACACTTCAACTACATGCAGCTACTCATTCAGGAATCAAACCATTTCATTG
TGAAAGATGTGACAAATATTTCAGTACTGAATGGCATTTGAAGAAACATG
TCAGAATCCATAATGGAAAAATAAAAAAGAATCATCATTGTGAACACTGC
GATAGATATTTTGTTTCTGGTGCTGACTTGAAAGACCATAAAAACAGCCA
CACTGGAAATAGACCATATGAGTGCAAAGCTTGTGGTAAATCATTTTCAC
GAAGGGACGCTTTCTATACACATAAGCAGAGTCATAATACAATTGAATGT
TTTGAATGTCAAGAATGTGGTAAAAGCTTTACAACAAAACGCAAACTTAC
TGTTCATGGATACAAGCACCGAACTGACAAACCCTTTAAATGTACGGTGT
GTGGTAATTGCTATACACACAATTATATTCTCACGAAACATATCAAACAA
AGCCATCATTAAATGAAATTAATAATAGAAAATATACAAACAAGTGATGT
CATTAGAGATAAAGAATCGTCTGGTAAATTCGATTTTCCAATCACAATCA
AATTTGACATCAAATTGGATGGTGAAATAATTGGTAACTTTGATTTATGT
GTTGAAAGTTCTACAAAATCTATCAAAATGTCGGATAGCAAGAGAAATCA
CTTTCATTTCATTCCAAAGAAACGTTCATCAGAAGACAACCCGGTTCTAA
AGACCGTTCCGATTGCTGATATCGTCATCAAACCAAAAATGCCAAGCATT
GCAACGATGATAAACACACAGTATCAACCTTTACCATCGAATCAATCAAA
TCAATTTCATAAAAATTTGATTGATCAACTCCAAGCAGTCACTTGCCATC
TTAAGAAAAAGAAAGGATTAAAAACTACACCGATTCAAATTTTGCAGCAA
AGGCGTCTAAATATTGCACCAAAACCAATAACAACACAAAATGAGGAGAA
AAACACAATCGATCTTCAAATTATTGAATCAAACAATGATTTAATGGAAA
AATCGAAATGTGTAGTTTGTAAAAAACCTGTGAAGAACCCAGACAGCATC
AATCGATTAACCAGCACATTTAATGTCAACAAAGAAGTCAAATGCATTAA
ATGCATTACAATCTTTGAAAGCACAAAATTAAATAATGAAAAACAGAAAG
ACCTTTTGCGTGTTAATATTGGAGTGAAGATACCTAAGCCTAAGATTATA
AAAGAATTTAAATGTCAAGAATGTGGTAAGATCCTTATGGATGGTGGTAG
TTTATTAGCGCACGAGAATGCTCATAAAGGAATCACACCATTTGAATGCG
AAGTTTGTGGAAAGTGTTTTCCAGGAAAGAATAATCTGAGAATGCACTTG
AAAATCCATCGAGATGAACATAGCTGTCAAGAATGTGGTGGGATTTTTAC
CTCAAAGAGCGATCTTATAAAACACAACCGATCCGCCCATCAAGGAACTG
CACCTTTTGAATGCGAAGAGTGTGGAAAGGATTTTCCAAAAAAGGCCCAC
CTGAGAGTGCATAAAAGGATCCATGCAAAAGAATTTAATTGTACAGAGTG
TGAAAGAAGTTTTGCCTTAAAAAGTGAGCTAACATTACATTTTCAAGTGA
CACATCAGGGAATCAAATCATTTCAGTGTAATGATTGTGGTAAAATGTTT
GCCAGAAAATTTACACTTCAACTACATGCAGCTACTCATTCAGGAATCAA
ACCATTTCATTGTGAAAGATGTGACAAATATTTCAGTACTGAATGGCATT
TGAAGAAACATGTCAGAATCCATAATGGAAAAATAAAAAAGAATCATCAT
TGTGAACACTGCGATAGATATTTTGTTTCTGGTGCTGACTTGAAAGACCA
TAAAAACAGCCACACTGGAAATAGACCATATGAGTGCAAAGCTTGTGGTA
AATCATTTTCACGAAGGGACGCTTTCTATACACATAAGCAGAGTCATAAT
ACAATTGAATGTTTTGAATGTCAAGAATGTGGTAAAAGCTTTACAACAAA
ACGCAAACTTACTGTTCATGGATACAAGCACCGAACTGACAAACCCTTTA
AATGTACGGTGTGTGGTAATTGCTATACACACAATTATATTCTCACGAAA
CATATCAAACAAAGCCATCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:4369559..4371220 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 316-1656:1342 |
| Aaloc | 1-315:1663 |
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