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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:4427587..4428867- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043961 ID=XLOC_043961|Name=XLOC_043961|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1281bp|location=Sequence derived from alignment at sc0000001_pilon:4427587..4428867- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTTGGAATTGAAAATTTAAAGATAAAAGCATTTGGTAAAATCTT
GGCATTTTCGTTTGATATTAGAATTAAAGGAAATAGAGTCGGGTTTTGCG
ATATTTCAATCGAAAATATAAATAGTAAGTTGTGCTTTGGTGAGCACGGA
AGTATCTTTACATACAAGCCAGATAAGGAAGTCGTTACCACAAACAGTGC
ACCAAAAGTTTCTCAAGAGTTATATTTGCCCTGTGTAATCAATGAACATG
GAATCTCTGGTAGAAATAGAACTAAATCAGTTGACATTGCATCTGATCAA
GAGTTGAATTTGCCTTCTGTAATTAATGAGCAGGACAAAGCATCGAGTAA
TCAACCTGGAAGAAATAGAACTAAATCAGATGACATTGAATCTGATCGAG
AGTTAAATTTGCCTTGTGTAGTTGATGAGCAGGACAAAGCCTTGAGCAAT
TTACCTGATAATAATAGAACCGACCTAAATGAAATTGTATCTGTTTTGAC
TCAAAGTAATAATAGTTTGAATCCTGTACACGTACCTCTAACACGTGAAA
ATGTTGCGAGTTCATCAAGCCAATGTCATGAAAATGTTGCTAGTTCTCCA
AGCCAATGTCAAAAAGATATTACCAGTTCTACAAGCCAATTCCAAGGAGA
AGAAGTAATGATACCCGAGGAAGAATCAAATAAATCAGAAATTGAGGAAA
TAAATAGCAAATCATCAAATCCGACTAAAAAAACGAAAAAACGAAAACGC
TTCCATTGTGAGAAATGCGACTCTTTGTTTACCTCGAATTCAGATTTAAG
AAGACACGTAAAAATTGTTCATGATAAAATTAAACGATACCAATGTGATG
ATTGTGATAAAACGTATGCACTCAAAGGTGATTTGAATAGACATACAAAT
GCTGTTCATAAGGGTATTAAACCATATCAATGTAATGTTTGTGAGATGTC
GTTTGCACGAAAGGCGCATCTGACGAACCATCAAATGGTACATACAGGTA
TAAGACGATTTCAGTGTAACGAATGTGGACAGCTAACAAATGACAAATTT
CATTTGAAAAAACATCAAATGACACACAGTAGAGAAAAGAAATTCGAATG
TAAGGAATGTGGTAAATCATTTGCACTCCAATGTTACCTCAAGACGCATC
AAACTATTACTCATAGCACTAATAAAGATTTCCAATGCAAGGAATGTGAG
AAATCGTTTGCGTGTAAGAGATATCTCGTCAAACATCAACGAATTCACAA
AACAAAAGAACCAACTTCTTCAAATATATAA Coding sequence (CDS) from alignment at sc0000001_pilon:4427587..4428867- >XLOC_043961 ID=XLOC_043961|Name=XLOC_043961|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2364bp|location=Sequence derived from alignment at sc0000001_pilon:4427587..4428867- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTTGGAATTGAAAATTTAAAGATAAAAGCATTTGGTAAAATCTT
GGCATTTTCGTTTGATATTAGAATTAAAGGAAATAGAGTCGGGTTTTGCG
ATATTTCAATCGAAAATATAAATAGTAAGTTGTGCTTTGGTGAGCACGGA
AGTATCTTTACATACAAGCCAGATAAGGAAGTCGTTACCACAAACAGTGC
ACCAAAAGTTTCTCAAGAGTTATATTTGCCCTGTGTAATCAATGAACATG
GAATCTCTGGTAGAAATAGAACTAAATCAGTTGACATTGCATCTGATCAA
GAGATGGATTTTGGAATTGAAAATTTAAAGATAAAAGCATTTGGTAAAAT
CTTGGCATTTTCGTTTGATATTAGAATTAAAGGAAATAGAGTCGGGTTTT
GCGATATTTCAATCGAAAATATAAATAGTAAGTTGTGCTTTGGTGAGCAC
GGAAGTATCTTTACATACAAGCCAGATAAGGAAGTCGTTACCACAAACAG
TGCACCAAAAGTTTCTCAAGAGTTATATTTGCCCTGTGTAATCAATGAAC
ATGGAATCTCTGGTAGAAATAGAACTAAATCAGTTGACATTGCATCTGAT
CAAGAGTTAAATTTGCCTTGTGTAGTTGATGAGCAGGACAAAGCCTTGAG
CAATTTACCTGATAATAATAGAACCGACCTAAATGAAATTGTATCTGTTT
TGACTCAAAGTAATAATAGTTTGAATCCTGTACACGTACCTCTAACACGT
GAAAATGTTGCGAGTTCATCAAGCCAATGTCATGAAAATGTTGCTAGTTC
TCCAAGCCAATGTCAAAAAGATATTACCAGTTCTACAAGCCAATTCCAAG
GAGAAGAAGTAATGATACCCGAGGAAGAATCAAATAAATCAGAAATTGAG
GAAATAAATAGCAAATCATCAAATCCGACTAAAAAAACGAAAAAACGAAA
ACGCTTCCATTGTGAGAAATGCGACTCTTTGTTTACCTCGAATTCAGATT
TAAGAAGACACGTAAAAATTGTTCATGATAAAATTAAACGATACCAATGT
GATGATTGTGATAAAACGTATGCACTCAAAGGTGATTTGAATAGACATAC
AAATGCTGTTCATAAGGGTATTAAACCATATCAATGTAATGTTTGTGAGA
TGTCGTTTGCACGAAAGGCGCATCTGACGAACCATCAAATGGTACATACA
GGTATAAGACGATTTCAGTGTAACGAATGTGGACAGCTAACAAATGACAA
ATTTCATTTGAAAAAACATCAAATGACACACAGTAGAGAAAAGAAATTCG
AATGTAAGGAATGTGGTAAATCATTTGCACTCCAATGTTACCTCAAGACG
CATCAAACTATTACTCATAGCACTAATAAAGATTTCCAATGCAAGGAATG
TGAGAAATCGTTTGCGTGTAAGAGATATCTCGTCAAACATCAACGAATTC
ACAAAACAAAAGAACCAACTTCTTCAAATATATAATTAAATTTGCCTTGT
GTAGTTGATGAGCAGGACAAAGCCTTGAGCAATTTACCTGATAATAATAG
AACCGACCTAAATGAAATTGTATCTGTTTTGACTCAAAGTAATAATAGTT
TGAATCCTGTACACGTACCTCTAACACGTGAAAATGTTGCGAGTTCATCA
AGCCAATGTCATGAAAATGTTGCTAGTTCTCCAAGCCAATGTCAAAAAGA
TATTACCAGTTCTACAAGCCAATTCCAAGGAGAAGAAGTAATGATACCCG
AGGAAGAATCAAATAAATCAGAAATTGAGGAAATAAATAGCAAATCATCA
AATCCGACTAAAAAAACGAAAAAACGAAAACGCTTCCATTGTGAGAAATG
CGACTCTTTGTTTACCTCGAATTCAGATTTAAGAAGACACGTAAAAATTG
TTCATGATAAAATTAAACGATACCAATGTGATGATTGTGATAAAACGTAT
GCACTCAAAGGTGATTTGAATAGACATACAAATGCTGTTCATAAGGGTAT
TAAACCATATCAATGTAATGTTTGTGAGATGTCGTTTGCACGAAAGGCGC
ATCTGACGAACCATCAAATGGTACATACAGGTATAAGACGATTTCAGTGT
AACGAATGTGGACAGCTAACAAATGACAAATTTCATTTGAAAAAACATCA
AATGACACACAGTAGAGAAAAGAAATTCGAATGTAAGGAATGTGGTAAAT
CATTTGCACTCCAATGTTACCTCAAGACGCATCAAACTATTACTCATAGC
ACTAATAAAGATTTCCAATGCAAGGAATGTGAGAAATCGTTTGCGTGTAA
GAGATATCTCGTCAAACATCAACGAATTCACAAAACAAAAGAACCAACTT
CTTCAAATATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:4427587..4428867 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 304-1182:880 |
| Aaloc | 1-303:1282 |
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