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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000061_pilon:179426..184696+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043955 ID=XLOC_043955|Name=XLOC_043955|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5271bp|location=Sequence derived from alignment at sc0000061_pilon:179426..184696+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGcatcttttaccaattttaaCATTCACAATCATATGTACACTCAACCA
GTTATCAACAGCTGTCAAACACAACGTTGGCAATCCTGACTTCTTACCCT
TTTTCCCGTTTTTCCCGTACGGGAAAGGGTTCGATTACGTGCTTACAGAT
CCACCAAATTATGTGTTCGCCGAGGGAGATGAAGATTATGGAATATTTGA
TCATTACCTGAGTAAAGAGCTcccgatttttcaaaatccaaacaCGCGGT
GGATATTTGTAAGTTGATTcttagttttaaaattttgattttttaaattc
acctttcgataatattgaaagccactGTCAACGAGAAACTTTCATAAACG
ACGCTTTACCATTCGATAcgttcccttattcgatgaaaatctaattttga
GACAACAACTGTAAATTAAGTTGGCTCTCTGAATTAATTGACCTTCAAtc
gacaaaaaatattttcttcaaaatagaGAAATTTAGAGAGCATTTTATTT
GTCTTGAGAGGGCAAatatttagttcgaattatagaaagactCGAATCca
agaggttcgaattagagagagttgactgtatgaaaaaaaTAGAACATTGG
ACTGCAATGCTTAATAACATAAACAGATACCCTTATCTCGTCAAGTGACC
TAGCAAGAGGTTTTTTAGGCTGTACTTCACCTATCTGTTCTCTGATATGT
TTTGGTATAGGAGCTGTGTattgtataaaaaaaaacaaaaatacgggtgt
aactctcggacgggaactttttacacgatacgcatcccttttatcaaaat
caaaccTGGATAACACACAGCCTAGAGTTTTTAGCATATAAGGAAATTCT
TAGGGAGCTCAAATATATCTAGATATGGTTAATGAAGATCATGCTACAGT
TAGTGCCTTTATCCTAGACCCAGCTGACATataacgttttttcaacgttt
atctaatattcacaacgtccaaataatgttagattaacgttgaaagaACG
CTGTGTGCCAAGTGGGGAGGGTAGATGACTGAAAACCAAATAACTGTTTA
CATTGGGAAGGGTAAAACCTAGTAACGTTTAAGTGGTTCTTAGTCCACTA
TTTTCACTTCATCAAAATCCTTCACATAAAAAACGTTTGTTGCTTCCTGC
TTAAAATTTACGCGTTGGTTGTCAAATTATATCAAAATGGTTTGTCGTAC
GGCTGTTATTAAAATccggaaaaaggaaaaacaatctTATGCGACCGCAA
TTTTGTTAATGAGTTTTCTAACCATATTGGGAGATGAATAATAACAACGT
TAAGTTCCTGGTTTTGTTTTTCTACGTTTGTCGACAATTTGTCGTAATTT
GACCTTCTCGTCGACGTCGACGTCGACACCCGGAAAACTGACCCTTTTAT
GTACCGAAATATCCTAATAATGATTTATAACTTTATATGGTATACGTTTC
TCGATttatcttttttaaacttttactgTGAAACAGGAACTTGAAACTTT
TTCTAATTAAGATTTTGTACTTTGTCTGATTTTAATATaacacaaatttt
gttttgggattttttaccataaaaaattctAACTTCACTAGCTTTAGCAA
CGACCTATAATTAAACTCGTATTCATTTTTCCATAAATAATCCAACTGAT
GATTGCATGATTGATGCATGATTAAAACAAGCGGTTTtggtcaaagaaaa
attactgtttcttaaaatgaattaattatttaattattccACAGGTTGGA
GTCAACGGTTATGTTTCATTCACCGAGCCTTGGTACAGCAACGGTGCAGA
TAAATTCCCTCAGGCTGGTCCTGGAATTAGTCTTTTCCAAACAGACCTTG
TTTTCACGGATGCAAAAGATTCACATCTCTCTTTTAAAGAGTACGATGAA
GAAGATAAAGACATTATGGAGCATGCGCGAAATGAATTGGAGGTGTACGC
CAATCTAAAAGATTTCGATCCTAACCACGTGATTGTTGTCACGTGGCATA
AAGCATCAAAGAAAGACAACAAAGGAAATGTACGTCCATTTTAACCAGAT
TTTCTCTAACTAAAAAGTAGACCTTTGATCTCCCTTGTGGATTTCCCAAT
AATATGTACACGAGTGTATCCCATGCATAACATAGTGTAATactatgaat
tttgaaatttctgattGGTCCACAATCAAGAATAAAAGACAAATCCTTTT
TTGATTGATGCACAGACAGCCCCATTCTtgatttccaaaagaaaaaaact
gtctaACTATAAACCCTTATATCTGAAATTTTGAAGTTAGCCTTTAGGCC
CTCAGCTTTACCCTGTTACCCTGTTACCTTGCCTCTACTGTTTTGACGTA
GTTCGTGTTTGAATGCAACTGTTAAAGAGATCGTGAGAAAAGAAACCGTT
TCCAATGTTTCCAGTGTGTCCATACTATCGTAAAACATATTGGACAAATT
GAGTACTTGGAATTCTAACCGATTTCtctttcctttgttcttttagGTCA
CTTTCCAACTAGTACTTGCTTCAGATGGTTTCAACACCTATGCCATTTTG
AATTACGAAGATATTACGATTAGCCTTCAGCGAAAAGATTTCTGTCCTGT
AACCgtaagtcaatttttttaatgcaCCCTAGGTATGGTTACCCGCCCtt
tttttATCAcagtttttagaaatttggTACCCTGTGATAGGACTATTCGA
CGTAATTCAATTTTTAACACGATATTGTTCGCTCTAAAATATGATGACTC
GCATCGagtcccccccccgcttattaatttattggaaaatgtttttaaaa
gttcccttttttgtcccaattctgctgtattagcctccttttaaaaaatt
ttccacccaggacatttttattccaatccccccgcttattaagttttgag
attttttccaaccccccccccccccccccccccccccccccccccccccg
cttattccaatctcCCCGGCTATTGTGTACCCGAGGGTGCTCCATGAGGA
TATCATATTCAAACATTTCGTTCAGGCAGCATCGAAGAACTGCTTTCAGG
GTTTTATATATAGCTCCTCAGTGGATCATAATAgtgaataatttcaattt
cttcttttaataaCACAGATTGGTTGGCAAGAAGACCTCCAACGTTATGT
CGAACATGAAAACATGCAACTCACCCCAGCCTTCCCGtatcgaccaatca
gaatgtCTAAGAAATCAAACATCGGTTTCCCTGGAAAATGGATTTATAAA
CTCTTTGGAACTAGTAAGTCACTATGATAGGTTTTCAGCAAATTATAATA
TTTTCCATACTTGTATAGggtttttcttataagcttTTTTCAGTCCCTTG
TTTCTGTATAGACCGATTCTTGTGACAACATTTTCACCCACGATcagcca
tttttctaagaaatgttTCTACCAATATACAGGATGATTTCCCTAACTGG
ATTTAGCCCAATCGGTCTATACAGTTGTCTGtgactctcactaattcgag
CCTGATAATCTGACTGACGGAGAGACtcggaaaatagaaaaaaaaaccct
gtgtcacagacccgctgggaacccagccccactggaaaatgtTTCCGTTC
CGGTTGGGAattaccctggaatttcagccccactgggaaattgactttca
ttccatccccatttgaaattcaatgtataTAAATTGCACTACagaaccat
ccccactggatttttttaccttggaacaatagaatatctATCCCCTGTat
aatttcgatagaaattttaatccccactgaggaaaaaagttccatcggGA
TGTGAGAAAGCAGGAAAGAGAAGAAGCTTGAGTATGAGATTAGAGATGAA
TTAGCAAAAAACTCTAAATAAAAGATTGCTAGATAGATTCCTTTTTTAAA
GGATGTAACTCAGAACTATCAATTCAGAAAAATGTTTAAACAAgaaattt
tatcatttcttCTTTGTAGAAATTGCAGAAGAAAACAAACCATCGCCAGT
GCCAACCCGACCAGCAGATCTCAAACATCTTCCCGCCCAATGCCCTGGAA
ACGACTTCTGCCAAAACACTAAAAACGTATTAAATGTATGGCCCGGTCAT
TCCGCCTTCTATGTAGTATGTCCACCCGGTGGCGCACCCGTATGTATGCC
ATGTGCGGAAGGGACCGCCTTTAGTCCGGAATGCAGGACGTGCGTTCATA
CAAGTCAACTTGGACAGCCAAAGGATAAACGTAAGTCAAGTTTTATAAAT
CTTTATCTTAATCTGCTCTTTAAGAGCAAAAGAAGTTGTTTTTCTGGATG
ATATTATTTTAAACACAGGGGGTGTTCGCAGACCAattgggaccccttcc
cactggaaaaattggctaaaatatcgtccccagtgggaagTAATCAAATA
ATCAAATCCTCACTGCCAAACACTGTGCTATTTTCATACCCACTGAATGT
TTTGGCtctaaaacaatgaaattcaaaaccCCAGCCATATAAAACATTGG
AATATCACAATGCCCATACCCATACCCCCACTGGCTTAaagatcctaccg
ggtctgtgagaagaagATGTGAAGGAGATGTTGTATCTTTTGTGCCATCA
TATCTCATTAGCCTAAAGCCCAAATGCCTCAAACTGTCTTCTTGAAAACC
ACCTAAACTCACAATATTAATTGTTCACATTTTTCTTAATCTTTTCTACA
GTTTGTCCACAACCATCAAAGAAGATGGAAGATCGAGTCAAACAAACTGC
AAGGTGCAACCATGCTGATGGTAAGACACTATTCTTATTTTCATAGAGGC
TCTCTTACGTCCTGCAAATAGTTTTTCTTCAGTCTCGAATACTTGAGGCA
GGGAAATTTctgttttcaaaggaaaatctcTTCATTTTCGAATAAAAGTC
TCTggattttcaaaggaaaatctcTGTATTTTACATCATACATACATAca
tcaaaagttcaaaaagctttttttccaAAGACTTGACTTATTATCCATTA
AATTTCAACTAACTTTTTTGTCACTTTAGCACTACGTCACTGTACCATGC
GTGAGAACCAATTACATGACGGTAAGAAGAAAACACCATACACCACAAGC
TACCGAAACCATAATGACGTCAATGGAGCGTCATATTATCTTTGTGCCGG
CGCTGTCGGTAGTTTCTGTATGCCTTGCCCCGCAGGAACCGTTTTTCAAC
AGTATGAGCATGATAAGAATAACGGCGCATGCGTACATAAAAGTCCAAAG
ACGCATGCTGAATGGGTTTAG Coding sequence (CDS) from alignment at sc0000061_pilon:179426..184696+ >XLOC_043955 ID=XLOC_043955|Name=XLOC_043955|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2736bp|location=Sequence derived from alignment at sc0000061_pilon:179426..184696+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGcatcttttaccaattttaaCATTCACAATCATATGTACACTCAACCA
GTTATCAACAGCTGTCAAACACAACGTTGGCAATCCTGACTTCTTACCCT
TTTTCCCGTTTTTCCCGTACGGGAAAGGGTTCGATTACGTGCTTACAGAT
CCACCAAATTATGTGTTCGCCGAGGGAGATGAAGATTATGGAATATTTGA
TCATTACCTGAGTAAAGAGCTcccgatttttcaaaatccaaacaCGCGGT
GGATATTTATGcatcttttaccaattttaaCATTCACAATCATATGTACA
CTCAACCAGTTATCAACAGCTGTCAAACACAACGTTGGCAATCCTGACTT
CTTACCCTTTTTCCCGTTTTTCCCGTACGGGAAAGGGTTCGATTACGTGC
TTACAGATCCACCAAATTATGTGTTCGCCGAGGGAGATGAAGATTATGGA
ATATTTGATCATTACCTGAGTAAAGAGCTcccgatttttcaaaatccaaa
caCGCGGTGGATATTTGTTGGAGTCAACGGTTATGTTTCATTCACCGAGC
CTTGGTACAGCAACGGTGCAGATAAATTCCCTCAGGCTGGTCCTGGAATT
AGTCTTTTCCAAACAGACCTTGTTTTCACGGATGCAAAAGATTCACATCT
CTCTTTTAAAGAGTACGATGAAGAAGATAAAGACATTATGGAGCATGCGC
GAAATGAATTGGAGGTGTACGCCAATCTAAAAGATTTCGATCCTAACCAC
GTGATTGTTGTCACGTGGCATAAAGCATCAAAGAAAGACAACAAAGGAAA
TGTTGGAGTCAACGGTTATGTTTCATTCACCGAGCCTTGGTACAGCAACG
GTGCAGATAAATTCCCTCAGGCTGGTCCTGGAATTAGTCTTTTCCAAACA
GACCTTGTTTTCACGGATGCAAAAGATTCACATCTCTCTTTTAAAGAGTA
CGATGAAGAAGATAAAGACATTATGGAGCATGCGCGAAATGAATTGGAGG
TGTACGCCAATCTAAAAGATTTCGATCCTAACCACGTGATTGTTGTCACG
TGGCATAAAGCATCAAAGAAAGACAACAAAGGAAATGTCACTTTCCAACT
AGTACTTGCTTCAGATGGTTTCAACACCTATGCCATTTTGAATTACGAAG
ATATTACGATTAGCCTTCAGCGAAAAGATTTCTGTCCTGTAACCGTCACT
TTCCAACTAGTACTTGCTTCAGATGGTTTCAACACCTATGCCATTTTGAA
TTACGAAGATATTACGATTAGCCTTCAGCGAAAAGATTTCTGTCCTGTAA
CCATTGGTTGGCAAGAAGACCTCCAACGTTATGTCGAACATGAAAACATG
CAACTCACCCCAGCCTTCCCGtatcgaccaatcagaatgtCTAAGAAATC
AAACATCGGTTTCCCTGGAAAATGGATTTATAAACTCTTTGGAACTAATT
GGTTGGCAAGAAGACCTCCAACGTTATGTCGAACATGAAAACATGCAACT
CACCCCAGCCTTCCCGtatcgaccaatcagaatgtCTAAGAAATCAAACA
TCGGTTTCCCTGGAAAATGGATTTATAAACTCTTTGGAACTAAAATTGCA
GAAGAAAACAAACCATCGCCAGTGCCAACCCGACCAGCAGATCTCAAACA
TCTTCCCGCCCAATGCCCTGGAAACGACTTCTGCCAAAACACTAAAAACG
TATTAAATGTATGGCCCGGTCATTCCGCCTTCTATGTAGTATGTCCACCC
GGTGGCGCACCCGTATGTATGCCATGTGCGGAAGGGACCGCCTTTAGTCC
GGAATGCAGGACGTGCGTTCATACAAGTCAACTTGGACAGCCAAAGGATA
AACAAATTGCAGAAGAAAACAAACCATCGCCAGTGCCAACCCGACCAGCA
GATCTCAAACATCTTCCCGCCCAATGCCCTGGAAACGACTTCTGCCAAAA
CACTAAAAACGTATTAAATGTATGGCCCGGTCATTCCGCCTTCTATGTAG
TATGTCCACCCGGTGGCGCACCCGTATGTATGCCATGTGCGGAAGGGACC
GCCTTTAGTCCGGAATGCAGGACGTGCGTTCATACAAGTCAACTTGGACA
GCCAAAGGATAAACTTTGTCCACAACCATCAAAGAAGATGGAAGATCGAG
TCAAACAAACTGCAAGGTGCAACCATGCTGATGTTTGTCCACAACCATCA
AAGAAGATGGAAGATCGAGTCAAACAAACTGCAAGGTGCAACCATGCTGA
TGCACTACGTCACTGTACCATGCGTGAGAACCAATTACATGACGGTAAGA
AGAAAACACCATACACCACAAGCTACCGAAACCATAATGACGTCAATGGA
GCGTCATATTATCTTTGTGCCGGCGCTGTCGGTAGTTTCTGTATGCCTTG
CCCCGCAGGAACCGTTTTTCAACAGTATGAGCATGATAAGAATAACGGCG
CATGCGTACATAAAAGTCCAAAGACGCATGCTGAATGGGTTTAGCACTAC
GTCACTGTACCATGCGTGAGAACCAATTACATGACGGTAAGAAGAAAACA
CCATACACCACAAGCTACCGAAACCATAATGACGTCAATGGAGCGTCATA
TTATCTTTGTGCCGGCGCTGTCGGTAGTTTCTGTATGCCTTGCCCCGCAG
GAACCGTTTTTCAACAGTATGAGCATGATAAGAATAACGGCGCATGCGTA
CATAAAAGTCCAAAGACGCATGCTGAATGGGTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061_pilon | genome | sc0000061_pilon:179426..184696 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1129-1368:5032 |
| Aaloc | 1060-1125:4704 |
| Aaloc | 799-1056:3972 |
| Aaloc | 652-795:3119 |
| Aaloc | 544-651:2497 |
| Aaloc | 259-543:1745 |
| Aaloc | 1-258:1 |
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