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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000061_pilon:138019..139585+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043952 ID=XLOC_043952|Name=XLOC_043952|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1567bp|location=Sequence derived from alignment at sc0000061_pilon:138019..139585+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaataacCATGAATTGAAGATTGAGAAAACCTCAATACTATTGGAAAC
AACTGATGTTTCAGCTCCAATCAAGATGACATTTGAAATCAAGAGTGGTC
AAAAAGTCATTGGTAATTGCCAAGTGTTGATGGAAAATTTTGCTACTACT
TTAGAATTAACTGATGTTCGTGGAAATGGTTTCCTGTTTAAACCAAAAAC
AAAGAACCGTAGAATTAATCCTCCTTCAAGCAGAAATTTGAGTAAACCAC
TACAGTTGATTAATAGGAATTCTGAACAGCAAAAAGAAGCTGGAAATCTC
TTGCTAGGCCTGATTGATGCAGTTAACCACAATCATAATCAAAGAACTTT
CAAAGCACCAGTTTTGAACTATCAAAATCAAGTAAGTACAGAAAGCATTG
ACAATTTCCCTGTTATCAAGGACTCTTATAGTATTGCTAACACTGTAAAT
AAAGATCTTAACAAAGATGATAGAGATAACCCACTTCACAAGAATGATAT
GGATATACCTATAACGATCTTCGTTTTGATGTTGTTGTAGAAAAGAATCT
CACCCAGAGTAGTTCAAAATCAAACTCAAAGGAGGAAAATCTAAAGCGAA
GCTCAGAATGTACTGAAAATGCACAATCTGTCGTAGATGAGAACTTATTA
AAAAACACTACAAACATACCAGacacaaataaacaaaatagtGGAGGGAT
GTCAGAACCTGTTGAAATTCTACTGGAGGTTATGGATAATGAAGAAGTTT
GTACCATCAAAAACCAGAAGAAAAGATTAAAGAAACATCAGTGTGATGAT
TGTGggcttttattttataaaaaaagtagaCTCGAGAGCCATCGCAATTC
AGTTCATAAAAGTTTAAAACTATTCGAGTGTCATGAGTGTGGTAAATCAT
TTAGCAGAAAAGACTATCTTAAAATCCATCAAAATAAGCATGAAGGAAAT
ACGCCTCACAAGTGCAAATTATGTGAAAACTCATATTTGTATCGAAACCA
ACTTATTCAGCATGTAAACAGTGCCCATAAGGGGATTAAATCATATCAAT
GCGAGGAATGTGGTAAAAGTTATTACTATAGGAATGATCTTAAAAGACAT
CATGATAAAATCCACAAAGGGCTCTCACCACATACCTGTGATTTGTGTGA
CAAatcttttttaagaaaagatcATCTTGAGAATCATAAAAATGCTGTAC
ATTTAAAGATTAAAAGCCATAATTGTGAAGTTTGTGGAAAAGGTTATACA
AGGAGAGGAGACCTTAATAAACATCAAAAGATCCATCATTATTTCAATTG
CAATGAATGTGGTAAATAGTTAGCGCGAGAAAATGTTCTGGCAATACATC
TTGTCACTCACAAAGGGAGACCAATGACACCACCTCCCTTAGATGAAGCA
ATACAATGACTTTTCTTCATTCATCATGAAATCAAAAGATCCATCATTAT
TTCAATTGCAATGAATGTGGTAAATAGTTAGCGCGAGAAAATGTTCTGGC
AATACATCTTGTCACTCACAAAGGGAGACCAATGACACCACCTCCCTTAG
ATGAAGCAATACAATGA Coding sequence (CDS) from alignment at sc0000061_pilon:138019..139585+ >XLOC_043952 ID=XLOC_043952|Name=XLOC_043952|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2950bp|location=Sequence derived from alignment at sc0000061_pilon:138019..139585+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaataacCATGAATTGAAGATTGAGAAAACCTCAATACTATTGGAAAC
AACTGATGTTTCAGCTCCAATCAAGATGACATTTGAAATCAAGAGTGGTC
AAAAAGTCATTGGTAATTGCCAAGTGTTGATGGAAAATTTTGCTACTACT
TTAGAATTAACTGATGTTCGTGGAAATGGTTTCCTGTTTAAACCAAAAAC
AAAGAACCGTAGAATTAATCCTCCTTCAAGCAGAAATTTGAGTAAACCAC
TACAGTTGATTAATAGGAATTCTGAACAGCAAAAAGAAGCTGGAAATCTC
TTGCTAGGCCTGATTGATGCAGTTAACCACAATCATAATCAAAGAACTTT
CAAAGCACCAGTTTTGAACTATCAAAATCAAGTAAGTACAGAAAGCATTG
ACAATTTCCCTGTTATCAAGGACTCTTATAGTATTGCTAACACTGTAAAT
AAAGATCTTAACAAAGATGATAGAGATAACCCACTTCACAAGAATGATAT
GGATATACCTATAACGATCTTCGTTTTGATGTTGTTGTAGAAAAGAATCT
CACCCAGAGTAGTTCAAAATCAAACTCAAAGGAGGAAAATCTAAAGCGAA
GCTCAGAATGTACTGAAAATGCACAATCTGTCGTAGATGAGAACTTATTA
AAAAACACTACAAACATACCAGacacaaataaacaaaatagtGGAGGGAT
GTCAGAACCTGTTGAAATTCTACTGGAGGTTATGGATAATGAAGAAGTTT
GTACCATCAAAAACCAGAAGAAAAGATTAAAGAAACATCAGTGTGATGAT
TGTGggcttttattttataaaaaaagtagaCTCGAGAGCCATCGCAATTC
AGTTCATAAAAGTTTAAAACTATTCGAGTGTCATGAGTGTGGTAAATCAT
TTAGCAGAAAAGACTATCTTAAAATCCATCAAAATAAGCATGAAGGAAAT
ACGCCTCACAAGTGCAAATTATGTGAAAACTCATATTTGTATCGAAACCA
ACTTATTCAGCATGTAAACAGTGCCCATAAGGGGATTAAATCATATCAAT
GCGAGGAATGTGGTAAAAGTTATTACTATAGGAATGATCTTAAAAGACAT
CATGATAAAATCCACAAAGGGCTCTCACCACATACCTGTGATTTGTGTGA
CAAatcttttttaagaaaagatcATCTTGAGAATCATAAAAATGCTGTAC
ATTTAAAGATTAAAAGCCATAATTGTGAAGTTTGTGGAAAAGGTTATACA
AGGAGAGGAGACCTTAATAAACATCAAAAGATCCATCATTATTTCAATTG
CAATGAATGTGGTAAATAGTTAGCGCGAGAAAATGatgaataacCATGAA
TTGAAGATTGAGAAAACCTCAATACTATTGGAAACAACTGATGTTTCAGC
TCCAATCAAGATGACATTTGAAATCAAGAGTGGTCAAAAAGTCATTGGTA
ATTGCCAAGTGTTGATGGAAAATTTTGCTACTACTTTAGAATTAACTGAT
GTTCGTGGAAATGGTTTCCTGTTTAAACCAAAAACAAAGAACCGTAGAAT
TAATCCTCCTTCAAGCAGAAATTTGAGTAAACCACTACAGTTGATTAATA
GGAATTCTGAACAGCAAAAAGAAGCTGGAAATCTCTTGCTAGGCCTGATT
GATGCAGTTAACCACAATCATAATCAAAGAACTTTCAAAGCACCAGTTTT
GAACTATCAAAATCAAGTAAGTACAGAAAGCATTGACAATTTCCCTGTTA
TCAAGGACTCTTATAGTATTGCTAACACTGTAAATAAAGATCTTAACAAA
GATGATAGAGATAACCCACTTCACAAGAATGATATGGATATACCTATAAC
GATCTTCGTTTTGATGTTGTTGTAGAAAAGAATCTCACCCAGAGTAGTTC
AAAATCAAACTCAAAGGAGGAAAATCTAAAGCGAAGCTCAGAATGTACTG
AAAATGCACAATCTGTCGTAGATGAGAACTTATTAAAAAACACTACAAAC
ATACCAGacacaaataaacaaaatagtGGAGGGATGTCAGAACCTGTTGA
AATTCTACTGGAGGTTATGGATAATGAAGAAGTTTGTACCATCAAAAACC
AGAAGAAAAGATTAAAGAAACATCAGTGTGATGATTGTGggcttttattt
tataaaaaaagtagaCTCGAGAGCCATCGCAATTCAGTTCATAAAAGTTT
AAAACTATTCGAGTGTCATGAGTGTGGTAAATCATTTAGCAGAAAAGACT
ATCTTAAAATCCATCAAAATAAGCATGAAGGAAATACGCCTCACAAGTGC
AAATTATGTGAAAACTCATATTTGTATCGAAACCAACTTATTCAGCATGT
AAACAGTGCCCATAAGGGGATTAAATCATATCAATGCGAGGAATGTGGTA
AAAGTTATTACTATAGGAATGATCTTAAAAGACATCATGATAAAATCCAC
AAAGGGCTCTCACCACATACCTGTGATTTGTGTGACAAatcttttttaag
aaaagatcATCTTGAGAATCATAAAAATGCTGTACATTTAAAGATTAAAA
GCCATAATTGTGAAGTTTGTGGAAAAGGTTATACAAGGAGAGGAGACCTT
AATAAACATCAAAAGATCCATCATTATTTCAATTGCAATGAATGTGGTAA
ATAGTTAGCGCGAGAAAATGGAAATCAAAAGATCCATCATTATTTCAATT
GCAATGAATGTGGTAAATAGTTAGCGCGAGAAAATGTTCTGGCAATACAT
CTTGTCACTCACAAAGGGAGACCAATGACACCACCTCCCTTAGATGAAGC
AATACAATGAGAAATCAAAAGATCCATCATTATTTCAATTGCAATGAATG
TGGTAAATAGTTAGCGCGAGAAAATGTTCTGGCAATACATCTTGTCACTC
ACAAAGGGAGACCAATGACACCACCTCCCTTAGATGAAGCAATACAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061_pilon | genome | sc0000061_pilon:138019..139585 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1339-1476:1430 |
| Aaloc | 517-1335:516 |
| Aaloc | 1-513:1 |
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