XLOC_043939 (mRNA) -

Overview
NameXLOC_043939
Unique NameXLOC_043939
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:4401477..4402304-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043939 ID=XLOC_043939|Name=XLOC_043939|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=828bp|location=Sequence derived from alignment at sc0000001_pilon:4401477..4402304- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAGAAAATGATGCTGTCACGATTTCGGAAGAAAATAATGCTGTTAC GATTTCCGAAGAAAGTATTTACCAACCAAGTAGATTGTCAGAAAACTATA CAGAAAGTTCCACGAGGCTTAGGTCTGCTGAGAATAGAAATAATGATTTA AGTCAAATTGAATCACTTATACAAAACAAGAAAACTGTGGAAAATGATAA TGTCAATGCACTTTACCATGACACAGAGAACCAAACAAATGATGAGATAG AAGCTTCTGTTGAAAAACAGAAAGTAAAAAGGAAATCGCAAACCCTAAAA TCTCAAGCTAATGAGAAAATAAAACCTGCTTATCTATGCAAGACATGCTT GAAGTATTACACCTCTAAAAGTCGTCTAGATCGGCATATTCAAACACATA CTAAACCTTATCAATGTAAGGATTGTGGTAAATTCTTTTCACAGCAGAAA CATCTCAAAATTCATCATGATAATATTCACAAGGGTATCAAATATTTTAA ATGCACTGAATGTGATAAGGGGTTCGTAACAAAGATAAGACTTGATGCTC ATATGCGATCTCACCAAGGTATAAAACCATTTAAATGTCAAGTTTGTGGG CTATGTTTTTCATGGAAGAGAAGTCTGGTAACTCATGAAAAAACTCATCA AGGAGATGATCCATTTATTTGTGGAGAATGTGGGAAAGAATTCAAAGAGA GGAAGGAACTTAAAGTACACACTGGAGAATTTCATAAAGGAGGTAAACCA TTTTATTGCTGTAAGTGCAACAGAAACTTCAGCCGTAGGAGTCATTTAAC AAGACATTATGCTTCTCATCATAGATAA

Coding sequence (CDS) from alignment at sc0000001_pilon:4401477..4402304-

>XLOC_043939 ID=XLOC_043939|Name=XLOC_043939|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000001_pilon:4401477..4402304- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAGAAAATGATGCTGTCACGATTTCGGAAGAAAATAATGCTGTTAC
GATTTCCGAAGAAAGTATTTACCAACCAAGTAGATTGTCAGAAAACTATA
CAGAAAGTTCCACGAGGCTTAGGTCTGCTGAGAATAGAAATAATGATTTA
AGTCAAATTGAATCACTTATACAAAACAAGAAAACTGTGGAAAATGATAA
TGTCAATGCACTTTACCATGACACAGAGAACCAAACAAATGATGAGATAG
AAGCTTCTGTTGAAAAACAGAAAGTAAAAAGGAAATCGCAAACCCTAAAA
TCTCAAGCTAATGAGAAAATAAAACCTGCTTATCTATGCAAGACATGCTT
GAAGTATTACACCTCTAAAAGTCGTCTAGATCGGCATATTCAAACACATA
CTAAACCTTATCAATGTAAGGATTGTGGTAAATTCTTTTCACAGCAGAAA
CATCTCAAAATTCATCATGATAATATTCACAAGGGTATCAAATATTTTAA
ATGCACTGAATGTGATAAGGGGTTCGTAACAAAGATAAGACTTGATGCTC
ATATGCGATCTCACCAAGGTATAAAACCATTTAAATGTCAAGTTTGTGGG
CTATGTTTTTCATGGAAGAGAAGTCTGGTAACTCATGAAAAAACTCATCA
AGGAGATGATCCATTTATTTGTGGAGAATGTGGGAAAGAATTCAAAGAGA
GGAAGGAACTTAAAGTACACACTGGAGAATTTCATAAAGGAGGTAAACCA
TTTTATTGCTGTAAGTGCAACAGAAACTTCAGCCGTAGGAGTCATTTAAC
AAGACATTATGCTTCTCATCATAGATAAATGCTAGAAAATGATGCTGTCA
CGATTTCGGAAGAAAATAATGCTGTTACGATTTCCGAAGAAAGTATTTAC
CAACCAAGTAGATTGTCAGAAAACTATACAGAAAGTTCCACGAGGCTTAG
GTCTGCTGAGAATAGAAATAATGATTTAAGTCAAATTGAATCACTTATAC
AAAACAAGAAAACTGTGGAAAATGATAATGTCAATGCACTTTACCATGAC
ACAGAGAACCAAACAAATGATGAGATAGAAGCTTCTGTTGAAAAACAGAA
AGTAAAAAGGAAATCGCAAACCCTAAAATCTCAAGCTAATGAGAAAATAA
AACCTGCTTATCTATGCAAGACATGCTTGAAGTATTACACCTCTAAAAGT
CGTCTAGATCGGCATATTCAAACACATACTAAACCTTATCAATGTAAGGA
TTGTGGTAAATTCTTTTCACAGCAGAAACATCTCAAAATTCATCATGATA
ATATTCACAAGGGTATCAAATATTTTAAATGCACTGAATGTGATAAGGGG
TTCGTAACAAAGATAAGACTTGATGCTCATATGCGATCTCACCAAGGTAT
AAAACCATTTAAATGTCAAGTTTGTGGGCTATGTTTTTCATGGAAGAGAA
GTCTGGTAACTCATGAAAAAACTCATCAAGGAGATGATCCATTTATTTGT
GGAGAATGTGGGAAAGAATTCAAAGAGAGGAAGGAACTTAAAGTACACAC
TGGAGAATTTCATAAAGGAGGTAAACCATTTTATTGCTGTAAGTGCAACA
GAAACTTCAGCCGTAGGAGTCATTTAACAAGACATTATGCTTCTCATCAT
AGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_043939XLOC_043939-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:4401477..4402304 -
Properties
Property NameValue
Aaloc1-828:829