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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000296_pilon:16572..18351- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043936 ID=XLOC_043936|Name=XLOC_043936|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1780bp|location=Sequence derived from alignment at sc0000296_pilon:16572..18351- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGATGAGAATGAAGATATAATTGTTATCAACCCAGATACAACAGC
GGGTAGCACTGAGTTTCATTTTGACCCACCTTCGTTTTTGATTGGTAATG
CTGACTGCAGTGAAAAAACGACAAACAATATTATTAAAAATGAAAAATAT
AAAGATTTTTTGATTTTACAATCCAATGAAGGAACGACCAATCAACAAAA
TAATGATATTGAACACGAAGAAACTTTTACATGTGATGTTTGTGATAAAT
CATTCCCTTCAAGATCGAAACTTAAACGCCATGGATATACCCATACTCGC
GTCAAAAGATTTGTTTGTAGCATTTGTCACAAAACATTTAATCAGTCTTA
TCATTTGAATGTTCACATGAACAGCCATACTGGAATTAAGCCCTACGAAT
GCAAGGAATGTGGTAAATTCTTTAGACAAAAGATTAACCTCAAAAGGCAT
ACCGCAACTCACGAAGGAATCAAGCCTTTCAAATGTGATATTTGTGATAA
AACATATGCCTTGAAAGTTGATCTCAACAGACACCTTAAGACCCATACAG
ACGTAAAATCTTATGGGTGTGGTGTTTGTGGGAAAACCTTCGCACGAAAA
TGTAATCTTACCCAACATCTTGGAACACATGAAAAAGAGAAGAAGTTTGA
ATGCAAGGAATGTGGTAAATGCTTTGCACAAAAGGCTCACCTCGAAAGGC
ATATCAACAATCACAAAGGAATCAAGCCTTTTAAATGTGATATTTGTGAT
AAAATGTTTGCCGTGAAAGCTGATATCAGCATACATCTTAAAACCCATGC
AGATGTTAAACCTCATGGGTGCGATGTTTGTGGGAAAACGTTTTCTCAAA
AGTCTAATCTTACGCATCATCTTACAACGCATGAAAACGAGAAGAAGTTT
GAATGTAAGGAATGTGGTAAACGATACAGATGGAAAAGAGATTTCGAAAA
GCACATGTTCACCCACCAAACAACTAGTGTTGAGAGTGCTCCTGATGAAA
CTATTGGTACTCTTGTTTCTATGGTTGGTTTATGACAAACCTTTTTTAAA
AAATGTTTCAATCTTGATACTGGTAGGGTCAGCCTGTCTTCGTCAATTTT
AAACAACAGTTGCCTAACCAAAGGGGTCTCTTCTCTTTCTCCCAGGATTT
CTCATCTTAGCATTGATAAAAAAACCCCGTTTTTTATAAATTGTTAAAAA
CATTAAGCATCAAGACATTACCATTAAGCATTAGGCATCAGACACTGGTT
TTTAATTTGAACATAAAACCTTTCACACCTTAGCCTAATGATCACTCTTT
TATGTTACAATTGCTTTGTTAATCATGCTTAATTTTTGTTATGCCTATTT
TTTATAGGTTTTATTTTTATCCATTGCATAAATTTTTACTTCCTATCTAT
CCCAGGTATTCTTTCTAGAGATTTTATAGTGTTCTGTGCTAATTTTGTAC
ATTAGTAAATTGGAATTGTCCATTTTTTATTCTATATATCTTACATTATA
TTGCATCTTGTTTTCATAATTTCTCTTCTCTTCGTTTTAGGTCATTCCAT
TTTGCCCTAAAGTGAAAAGCTGTGGGGGTGGGGTGGGGGTCTTTTTAATA
AAGTCGATCGATACCTCTTAATTAAGCTATCATTTTTATCCGTTTTCATA
TACAATTACCAATAAAAAACGAGTTTTTCTAACCAATTTTCATTTATTTT
TGTTTTCACAGACCATCATACTAGACATAAATAAAAAGTGTTCATATTCG
AAACTGGATTGTCATAATTTTGATTTATGA Coding sequence (CDS) from alignment at sc0000296_pilon:16572..18351- >XLOC_043936 ID=XLOC_043936|Name=XLOC_043936|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2184bp|location=Sequence derived from alignment at sc0000296_pilon:16572..18351- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGATGAGAATGAAGATATAATTGTTATCAACCCAGATACAACAGC
GGGTAGCACTGAGTTTCATTTTGACCCACCTTCGTTTTTGATTGGTAATG
CTGACTGCAGTGAAAAAACGACAAACAATATTATTAAAAATGAAAAATAT
AAAGATTTTTTGATTTTACAATCCAATGAAGGAACGACCAATCAACAAAA
TAATGATATTGAACACGAAGAAACTTTTACATGTGATGTTTGTGATAAAT
CATTCCCTTCAAGATCGAAACTTAAACGCCATGGATATACCCATACTCGC
GTCAAAAGATTTGTTTGTAGCATTTGTCACAAAACATTTAATCAGTCTTA
TCATTTGAATGTTCACATGAACAGCCATACTGGAATTAAGCCCTACGAAT
GCAAGGAATGTGGTAAATTCTTTAGACAAAAGATTAACCTCAAAAGGCAT
ACCGCAACTCACGAAGGAATCAAGCCTTTCAAATGTGATATTTGTGATAA
AACATATGCCTTGAAAGTTGATCTCAACAGACACCTTAAGACCCATACAG
ACGTAAAATCTTATGGGTGTGGTGTTTGTGGGAAAACCTTCGCACGAAAA
TGTAATCTTACCCAACATCTTGGAACACATGAAAAAGAGAAGAAGTTTGA
ATGCAAGGAATGTGGTAAATGCTTTGCACAAAAGGCTCACCTCGAAAGGC
ATATCAACAATCACAAAGGAATCAAGCCTTTTAAATGTGATATTTGTGAT
AAAATGTTTGCCGTGAAAGCTGATATCAGCATACATCTTAAAACCCATGC
AGATGTTAAACCTCATGGGTGCGATGTTTGTGGGAAAACGTTTTCTCAAA
AGTCTAATCTTACGCATCATCTTACAACGCATGAAAACGAGAAGAAGTTT
GAATGTAAGGAATGTGGTAAACGATACAGATGGAAAAGAGATTTCGAAAA
GCACATGTTCACCCACCAAACAACTAGTGTTGAGAGTGCTCCTGATGAAA
CTATTGGTACTCTTGTTTCTATGATGAGTGATGAGAATGAAGATATAATT
GTTATCAACCCAGATACAACAGCGGGTAGCACTGAGTTTCATTTTGACCC
ACCTTCGTTTTTGATTGGTAATGCTGACTGCAGTGAAAAAACGACAAACA
ATATTATTAAAAATGAAAAATATAAAGATTTTTTGATTTTACAATCCAAT
GAAGGAACGACCAATCAACAAAATAATGATATTGAACACGAAGAAACTTT
TACATGTGATGTTTGTGATAAATCATTCCCTTCAAGATCGAAACTTAAAC
GCCATGGATATACCCATACTCGCGTCAAAAGATTTGTTTGTAGCATTTGT
CACAAAACATTTAATCAGTCTTATCATTTGAATGTTCACATGAACAGCCA
TACTGGAATTAAGCCCTACGAATGCAAGGAATGTGGTAAATTCTTTAGAC
AAAAGATTAACCTCAAAAGGCATACCGCAACTCACGAAGGAATCAAGCCT
TTCAAATGTGATATTTGTGATAAAACATATGCCTTGAAAGTTGATCTCAA
CAGACACCTTAAGACCCATACAGACGTAAAATCTTATGGGTGTGGTGTTT
GTGGGAAAACCTTCGCACGAAAATGTAATCTTACCCAACATCTTGGAACA
CATGAAAAAGAGAAGAAGTTTGAATGCAAGGAATGTGGTAAATGCTTTGC
ACAAAAGGCTCACCTCGAAAGGCATATCAACAATCACAAAGGAATCAAGC
CTTTTAAATGTGATATTTGTGATAAAATGTTTGCCGTGAAAGCTGATATC
AGCATACATCTTAAAACCCATGCAGATGTTAAACCTCATGGGTGCGATGT
TTGTGGGAAAACGTTTTCTCAAAAGTCTAATCTTACGCATCATCTTACAA
CGCATGAAAACGAGAAGAAGTTTGAATGTAAGGAATGTGGTAAACGATAC
AGATGGAAAAGAGATTTCGAAAAGCACATGTTCACCCACCAAACAACTAG
TGTTGAGAGTGCTCCTGATGAAACTATTGGTACTCTTGTTTCTATGACCA
TCATACTAGACATAAATAAAAAGTGTTCATATTCGAAACTGGATTGTCAT
AATTTTGATTTATGAACCATCATACTAGACATAAATAAAAAGTGTTCATA
TTCGAAACTGGATTGTCATAATTTTGATTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000296_pilon | genome | sc0000296_pilon:16572..18351 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1021-1089:70 |
| Aaloc | 970-1020:809 |
| Aaloc | 1-969:1781 |
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