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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000071_pilon:417177..423150- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043905 ID=XLOC_043905|Name=XLOC_043905|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5974bp|location=Sequence derived from alignment at sc0000071_pilon:417177..423150- (Clytia hemisphaerica_ch_hm2_pilon)
GGAATGACCACGGATAAACATTTTGCGTCATTGTTGCTATTGGTTACGCA
ACTACAAAGTCACGTGACATCCGTCGGGCCGACCGATGCATTGAATTTCA
ATATTTACGAAGATTTCCACTTAGATGAAGCGCGTAAAGCGAGGGGAATT
CTCGAAAAATTTGATGGTTTTGTCGAACAGTTGCTCTGTGAATTCGAAGA
CCATCCTGCTCTTTTACAAGTAAGCTTTTCAGTATGTTCTTCATAAAGAT
GATTCGATTGCTGCTTACTGCCAGACCCGCATGTCAAATTTTAGTTGAGA
TTCCCGTGAAAAGTGTAAAGTTCTTTTCAAACTCTTGCCACCTTCCTGAC
CGTATGCCTTGAAGGCGGCCCCTTGTAAAATCACTTCACTCAAATGGTTG
ATTTGCCATTGTTTTGTCTTATTATCATGTCAAAATGATCCGGATCTTAT
ACTGAAATCGAAAAAAAAGTAGTTGATATAATTTGTTAATTATTTTATTT
AGATCCGTAAGCTTATCGAAAGGGTTTTATCACTCAGCATATGCAGCCCT
TTGATGAAATTTGTCACCGGTTTCGAGTTACTCCTTAAGCAGTCACAGGT
ATGTTATTGAAAATTATATTGATCATTTTATAGAGCCTAGTTTCCCAGTT
TTCACAGCGAACGTTGAAGGGTGTTGTGATTGTTGAGACAATACCGAGTT
TATGTATCGGAGGATATCGAGGGCGACGGTAAGTGAAATGATGCAAAACA
AAGTCGATAGTTCATGTACGGCTCTATATCGCCTATGCTCACCTAAAAAT
ACGACGGTATTTTGGTGTTTTTACCGTCGTCGAGCAAAGTGGATGGTGAT
TTTGGAGACATGTCAACTTTGCTTTATACCGTCCCCCTCGATTTATCTCG
AATACATAAACTCGCTAATAGATTGGAGATGAAAGTATTTGCTTGAATCA
AAATGAACACTCTTGATGATCTGTTCTTTCGTTCTTTATGATTAGGATTG
GGAAGCTTACGCAGGATCGCACGTTTCTTTGAAAAATCATTTGGAAGATG
TTACTCGACAAATCGTCCTATGGAGAAAGATGGAACTCAAGTATTTACAT
TTTTTGCTGTCATCTCTGTTTTGTATACATACAATTTGTCCCTATGGTTT
TAATGATGGGACCGATCAAATCTTATTGAAAGGTCTTTTTTTTTTGAAGT
TCCAAAAGATGGAAAGTCACTTGGAACAAGTAAAGGATTTCATTCATAGC
TAACGGGAATAACAAACGGAAATAAAGAAAAATCGCTACCAAAACTTTAT
CGCATTTTTTAACTTTTCTTTTTAAAGAACATGGCAGAACTTGTTACAGA
AGTCCGAACAGAAGATGGAAGATTCTGTGGCTAAATGGATGTTTCATTTC
TGGAACCTTCTTCAAGAAATCGAGACATCCGACGATGAAACAAATTGCAA
GGAAAAGAAAGGTTCGATTTCTTTTTTTTTAAGAACTGCATGGGGAGAAG
TACTGTTCACTGTTAATGATGCTCAATGATAAGGAAATGAGAGGTCGCAT
ACTGTATTGATAAAAGAGGAAAATTTTCTCTCAATTTTCTCTCAATTTTC
TCTCAATCTCTCACTTTCTCTTTCTTTCGCTTTCATTTTTTCCTAGCATG
ATTTTACTTAGTCTACCTTTCGGGTCATATTTTTTGGAGTAAACGATTTG
ACCCCATCGAAGTTTTTCTTAACTTTACCATTTCACCTGAAAACGTCAAC
AAAGCTTATCAATTGAGAATCTTGACGTTTTTAATTTTCTAGATGAATAT
TTCCAAGCACTCCGGCAATTCTTTGAAAGTGGTAACATTGGTGATTTTGA
ATCTCGCATTGAACTGGTGGTAATCTTTTTCAAATATATTTGTCAACTGG
ATGAAACACAAGGTAGGTACACACAAAATTTAAAAGACTGTAAAAGACTT
AGTAAAACTTAGTTTATTGGGTTTACCAAACGTGCAATTCCCAAGAGAAC
TTACGTTTTCATCCGAGAGTCAAATTTATCAATATTGTTTTATTATAGAT
CTTTTTGAAAGGGTAATAGACTCTTTTCTGAACTATTAGATTACTTTTCA
TTTTTCAAAGTCAGGGACCTTCAAGCCGGCCGACATGACAATTGTCACTT
ACGGATAGCTCGATCATCGATTGTTTTCTGAAAAAAAACGGACAAAAATG
CTTGCATCTCCACGGCTCTTTGCGAATTTTATCCCGCAGTGTCTCTTTCA
ATTTCAAGATCTAACGTTTTTATTGAAAAATATTTAGATCTACAAAGAGT
GACTTGGAACTCCCTGCAATATTACTCGCAATTTCTCCCAGCTGTTAATC
AACACAAACTCGCTTTGAAGAAACCCATTGAAAAAGAGTTAAAGGTTTGA
TAAAGCTTTTAAATGGATGTTTAAGTGATTTCATTCTTCTTATAGGGTAG
ATGCTTACCAAATTCTTAAGTTTATTACAGTATGCATAAGGAAAGAGGTC
GTAAATTTGTATAAAAGGCTACGTTCCCTTAAAATGGACAAAAATGATAA
AATATGTTTTTTTTATCTGTCATATCATCCCCCTTCTCCTTTTTTTCAGG
ATTACGTGAAAATTGCCAAATGGAGTGACATCAATTATTACGCATTGAAA
TTAGCCGTGGAAAAGTCCCATCGGACACTCACTAAGTTTGTCCGAAAATA
TGAGGTAATATTTTGAGTACTTCTCAAAAACTTCCACCCCGCTGTGGCAC
TACATGTATCATCGAGATTTAGTTTCCGTTTCTTGAGAAGAAAATTCGTC
TGCTTTCACAAAGTTTTCTTTTTACGAATAAATGTTTAGCTCTAGTATAA
TGAAAAGCTAGACCCTTCCAACATTTGCCAAATCGCTGCCAGTTTGAGAT
TGACTAACTGGTCCCATTTCATGAAGCTTCGATTCATCTTTGCTACACAT
TGAATCATTTTGATCCTTTTTCAAAAACGGCGAAAAACTAAAGAATACGA
CAAACGTTCTCCACTTTCTACCAAGTCAAGACTATATTTTGGAAACTTTT
TCAGGGCGTTTTGAACGAACCAATCACTCAATTCTTGCAAGACGCTACTA
AACAAACAAAACCGTCAGAAATACAAAAGAATTTCCATATCAAACTGCTC
CAGGATAACCTAACTTTCGCAATCGTCAAACCTCCTTCAGAAAAAGAAGG
TTACCTAGCAAAAACAGATTCGTTGTGTCACAAGATGCGGAAACATTTTG
AAACGGTGAAGAGTAACACGATGTATGGTGATTTGATCGAAGGAATCGAC
GAAATGACAGGTAAAAATCAGTTTGGAATCTATTGGATATTTTCCACGCC
CCTGTATGCAGGCATGTGATATCATATCATCTTTCTCTTTACATTCCAGG
TGATATTATCGAATCAATTCAAGATTTCCAGAAAGAAAACCCTCTATCTC
TGGTAAGTTTGTCGTAACTATAGAATAGTGAAAGTTTATTGCACTTCGTT
TTGTGTGATACACGTTTGAGTCAGGCGTTTGAGGAAGATGTTCAAATCAC
TTCTTTTATGACGCTTTATAAAAAAGAGGACGCCATCAGTAAATTTTTGG
GCATAATTAAATATCGAATAATCCTCTAATGTTCTTCTTTATCCATTTTA
GCCTAAAGAAAAACAGAAAGAAGCTCGAAGCAATTTACAGCAAAGAAAAC
GAAAAGCTTTGGCCACGCTGTTCAAAGAACTCAAAATGATTGGTAAGATC
GGATAAAGTTTTCTACAGGGCTTACAAGCGAATCTCTCTCCCTGCTGTGT
TCCGATTGTCTCCTTCTAAAAAGCTGTTATTGATATTTTCTTAATGAAAC
CAAACTTAAACTTAAATATGTACTAAACGAACAGACAGAATAAAAAATGT
ATTATCGGAATGATATACCCAAATAGGCGTATTATCATGATTAACAAAGT
TTGTGGGTTATATTATATTTTTTAATATAATGCATGTTTGTTTGACTTCT
GCTTTTTACTTTCACCTGCAGGTATTTCCTACAGAATCGGCAACATCGAC
GTTACAGAAGAAGCCACGCTTTTTCAGTCACCTAAACTGGAATCCAAGTA
AGTCGTGTTTCCAGGGGTTTTAGTATAAGGGGCCCCCAGTGGTTTGAGTG
AATGCGTGAATGGGCTATTTCACTTGCGTGAATGCGTGAAAATCAAAAAT
TGCGTGAATGTGTGAATTTGAAAGCTTTGCGTGAACCAAAATTGCGTGAA
CAAACATTGCATGAATTGCGAAAAAACATTGCGTGAATGCGTGAATTTGG
GAAATAAAATTGCGCGATTGCGTGAATTGAAGGTCCGCTGGGGGGCCTCG
TATGCTAAAGAGAGGTTTTTCATATTTTGTTGAGTTACGTAGCTTCCAGC
ATTTTGGAAGCAGCATTCTATTTGCGTAAGGGATCGCCTCTATAGATTTG
ATCGTTTGTTCCCATAATGAATGGCGGAAATAACGTGACTCGACAAACAA
AAGATCTCTGTTGCCTTACCTGACCTGACCTGACTACGTTACCTGACCTG
ACTCCATTACTGTTCACCATTAATGAAATCATTGAAAATATGAAAATTAA
CACTTACTTTTCACCTAGGTTGGCTAGTTGGAATGATATTCGAGAGTGTA
TCGATACATGCAACTTCTACTACTTCCAATCAGTCGCTCGCAATGCATTA
TTCCACAATGCACTATGTGCACCTTGCAAAGTGAGTCTTCATTATTTTCA
ATCTCACTACGAAATAAAGAGTTCTCTTTTGCTTTTGATAATAATGCATA
ATCAATGTATAATTTATAGTACCTTATTACATTACACGAATATTACTAGT
CATTTTATTAACACGAATTGAAAAATTTCGCGTTAATAAAAACCCCTTAA
TTAAAACCAGCCGTGGTGTGCTTGAAAAAGCAAATAAAATTCGTGTCAAT
TTTTTGCGTGTTAATTTCAAGGCCGTTGAATATTTGCCTAGTAATCTTCG
TGTAATATCATAAGGTATTCTAACACGGGGAAATAATATCCTATTCTTCC
ACTATAGAGGATAGAAAAAGCTCTATGTGGAGACTTTATGATGAACTTTT
TGTAAACAAGTATTTATGTTTGTTCATTTTTTAGGAAATCGGACCAAATG
AGATTGCTCGATTTAAAGGTTTGACTTCATTCTTGATGACATCAGCATTC
AACCAACGGAAAGACTTGGATGAGTTACTCGTCAACGAAAATCGAATTAG
GTGAGGAATTCAAAGTCCTTCATTTCATCAACCTTCTTGGATGTCGGCTT
GGAAATTAGTCGAATGGTCTTACAAAATTAATAGCGTAAATTCAGGTTTT
TTGCTCATATTTTTATTTCTACACGGTTCTACTTATCTCACTTATCTATA
TTTTTCAAAGTTTTCACGAATGCTTATTTTTCAATTTCTTTTTTCCAGTA
CGCTTATTGAAAGTTTGAGTGAGATTCAAAGAAGTAGCGACCAGAAGGAA
ACCATTCTTCCGTGTCAAACAACAACTAAACACTGGCTGGTAAGTGGAAA
TGACGAATGATGTTTTTTTCTCAATCCATCCATCCATATATTCGAGCCAG
GAACCCCTGGTTTCAGGCGCTGAGGCTTTCACCACTCGGCCACCGCTCCT
TGCATCCATGGTTAATGATTTGCTTTCAACAATCAAATGTCTTTGAGGAA
ATTGATTTAATTCGAAGGACAAAAGACAAACTTTTCAAAAAAGATGAGAG
CTACTAGACTACACCATTCTAAAATTTTTATTTCCTTAACTTTTCAGTAC
ACAATCAATGAGACCATTTACATGGCAGAACACCATTTAAATGACTTCAC
CAACCTGATTAACACATGCCCAGAAGATAACCAATTCTCGTTCCCTTTCC
TTAAAGAAGAACTGTCTGAAATGGAGCTCTCTGTCCGAAATGAGAAGATT
GTCCTAGATGCCGTGACCACCGCT Coding sequence (CDS) from alignment at sc0000071_pilon:417177..423150- >XLOC_043905 ID=XLOC_043905|Name=XLOC_043905|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3696bp|location=Sequence derived from alignment at sc0000071_pilon:417177..423150- (Clytia hemisphaerica_ch_hm2_pilon)
GGAATGACCACGGATAAACATTTTGCGTCATTGTTGCTATTGGTTACGCA
ACTACAAAGTCACGTGACATCCGTCGGGCCGACCGATGCATTGAATTTCA
ATATTTACGAAGATTTCCACTTAGATGAAGCGCGTAAAGCGAGGGGAATT
CTCGAAAAATTTGATGGTTTTGTCGAACAGTTGCTCTGTGAATTCGAAGA
CCATCCTGCTCTTTTACAAGGAATGACCACGGATAAACATTTTGCGTCAT
TGTTGCTATTGGTTACGCAACTACAAAGTCACGTGACATCCGTCGGGCCG
ACCGATGCATTGAATTTCAATATTTACGAAGATTTCCACTTAGATGAAGC
GCGTAAAGCGAGGGGAATTCTCGAAAAATTTGATGGTTTTGTCGAACAGT
TGCTCTGTGAATTCGAAGACCATCCTGCTCTTTTACAAATCCGTAAGCTT
ATCGAAAGGGTTTTATCACTCAGCATATGCAGCCCTTTGATGAAATTTGT
CACCGGTTTCGAGTTACTCCTTAAGCAGTCACAGATCCGTAAGCTTATCG
AAAGGGTTTTATCACTCAGCATATGCAGCCCTTTGATGAAATTTGTCACC
GGTTTCGAGTTACTCCTTAAGCAGTCACAGGATTGGGAAGCTTACGCAGG
ATCGCACGTTTCTTTGAAAAATCATTTGGAAGATGTTACTCGACAAATCG
TCCTATGGAGAAAGATGGAACTCAAGATTGGGAAGCTTACGCAGGATCGC
ACGTTTCTTTGAAAAATCATTTGGAAGATGTTACTCGACAAATCGTCCTA
TGGAGAAAGATGGAACTCAAAACATGGCAGAACTTGTTACAGAAGTCCGA
ACAGAAGATGGAAGATTCTGTGGCTAAATGGATGTTTCATTTCTGGAACC
TTCTTCAAGAAATCGAGACATCCGACGATGAAACAAATTGCAAGGAAAAG
AAAGAACATGGCAGAACTTGTTACAGAAGTCCGAACAGAAGATGGAAGAT
TCTGTGGCTAAATGGATGTTTCATTTCTGGAACCTTCTTCAAGAAATCGA
GACATCCGACGATGAAACAAATTGCAAGGAAAAGAAAGATGAATATTTCC
AAGCACTCCGGCAATTCTTTGAAAGTGGTAACATTGGTGATTTTGAATCT
CGCATTGAACTGGTGGTAATCTTTTTCAAATATATTTGTCAACTGGATGA
AACACAAGATGAATATTTCCAAGCACTCCGGCAATTCTTTGAAAGTGGTA
ACATTGGTGATTTTGAATCTCGCATTGAACTGGTGGTAATCTTTTTCAAA
TATATTTGTCAACTGGATGAAACACAAGATCTACAAAGAGTGACTTGGAA
CTCCCTGCAATATTACTCGCAATTTCTCCCAGCTGTTAATCAACACAAAC
TCGCTTTGAAGAAACCCATTGAAAAAGAGTTAAAGATCTACAAAGAGTGA
CTTGGAACTCCCTGCAATATTACTCGCAATTTCTCCCAGCTGTTAATCAA
CACAAACTCGCTTTGAAGAAACCCATTGAAAAAGAGTTAAAGGATTACGT
GAAAATTGCCAAATGGAGTGACATCAATTATTACGCATTGAAATTAGCCG
TGGAAAAGTCCCATCGGACACTCACTAAGTTTGTCCGAAAATATGAGGAT
TACGTGAAAATTGCCAAATGGAGTGACATCAATTATTACGCATTGAAATT
AGCCGTGGAAAAGTCCCATCGGACACTCACTAAGTTTGTCCGAAAATATG
AGGGCGTTTTGAACGAACCAATCACTCAATTCTTGCAAGACGCTACTAAA
CAAACAAAACCGTCAGAAATACAAAAGAATTTCCATATCAAACTGCTCCA
GGATAACCTAACTTTCGCAATCGTCAAACCTCCTTCAGAAAAAGAAGGTT
ACCTAGCAAAAACAGATTCGTTGTGTCACAAGATGCGGAAACATTTTGAA
ACGGTGAAGAGTAACACGATGTATGGTGATTTGATCGAAGGAATCGACGA
AATGACAGGGCGTTTTGAACGAACCAATCACTCAATTCTTGCAAGACGCT
ACTAAACAAACAAAACCGTCAGAAATACAAAAGAATTTCCATATCAAACT
GCTCCAGGATAACCTAACTTTCGCAATCGTCAAACCTCCTTCAGAAAAAG
AAGGTTACCTAGCAAAAACAGATTCGTTGTGTCACAAGATGCGGAAACAT
TTTGAAACGGTGAAGAGTAACACGATGTATGGTGATTTGATCGAAGGAAT
CGACGAAATGACAGGTGATATTATCGAATCAATTCAAGATTTCCAGAAAG
AAAACCCTCTATCTCTGGTGATATTATCGAATCAATTCAAGATTTCCAGA
AAGAAAACCCTCTATCTCTGCCTAAAGAAAAACAGAAAGAAGCTCGAAGC
AATTTACAGCAAAGAAAACGAAAAGCTTTGGCCACGCTGTTCAAAGAACT
CAAAATGATTGCCTAAAGAAAAACAGAAAGAAGCTCGAAGCAATTTACAG
CAAAGAAAACGAAAAGCTTTGGCCACGCTGTTCAAAGAACTCAAAATGAT
TGGTATTTCCTACAGAATCGGCAACATCGACGTTACAGAAGAAGCCACGC
TTTTTCAGTCACCTAAACTGGAATCCAAGTATTTCCTACAGAATCGGCAA
CATCGACGTTACAGAAGAAGCCACGCTTTTTCAGTCACCTAAACTGGAAT
CCAAGTTGGCTAGTTGGAATGATATTCGAGAGTGTATCGATACATGCAAC
TTCTACTACTTCCAATCAGTCGCTCGCAATGCATTATTCCACAATGCACT
ATGTGCACCTTGCAAAGTTGGCTAGTTGGAATGATATTCGAGAGTGTATC
GATACATGCAACTTCTACTACTTCCAATCAGTCGCTCGCAATGCATTATT
CCACAATGCACTATGTGCACCTTGCAAAGAAATCGGACCAAATGAGATTG
CTCGATTTAAAGGTTTGACTTCATTCTTGATGACATCAGCATTCAACCAA
CGGAAAGACTTGGATGAGTTACTCGTCAACGAAAATCGAATTAGGAAATC
GGACCAAATGAGATTGCTCGATTTAAAGGTTTGACTTCATTCTTGATGAC
ATCAGCATTCAACCAACGGAAAGACTTGGATGAGTTACTCGTCAACGAAA
ATCGAATTAGTACGCTTATTGAAAGTTTGAGTGAGATTCAAAGAAGTAGC
GACCAGAAGGAAACCATTCTTCCGTGTCAAACAACAACTAAACACTGGCT
GTACGCTTATTGAAAGTTTGAGTGAGATTCAAAGAAGTAGCGACCAGAAG
GAAACCATTCTTCCGTGTCAAACAACAACTAAACACTGGCTGTACACAAT
CAATGAGACCATTTACATGGCAGAACACCATTTAAATGACTTCACCAACC
TGATTAACACATGCCCAGAAGATAACCAATTCTCGTTCCCTTTCCTTAAA
GAAGAACTGTCTGAAATGGAGCTCTCTGTCCGAAATGAGAAGATTGTCCT
AGATGCCGTGACCACCGCTTACACAATCAATGAGACCATTTACATGGCAG
AACACCATTTAAATGACTTCACCAACCTGATTAACACATGCCCAGAAGAT
AACCAATTCTCGTTCCCTTTCCTTAAAGAAGAACTGTCTGAAATGGAGCT
CTCTGTCCGAAATGAGAAGATTGTCCTAGATGCCGTGACCACCGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000071_pilon | genome | sc0000071_pilon:417177..423150 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1672-1848:178 |
| Aaloc | 1582-1671:526 |
| Aaloc | 1465-1578:841 |
| Aaloc | 1354-1464:1356 |
| Aaloc | 1279-1350:1952 |
| Aaloc | 1186-1275:2324 |
| Aaloc | 1135-1185:2574 |
| Aaloc | 877-1131:2921 |
| Aaloc | 772-876:3376 |
| Aaloc | 667-771:3686 |
| Aaloc | 547-663:4181 |
| Aaloc | 412-543:4647 |
| Aaloc | 316-408:4980 |
| Aaloc | 220-315:5473 |
| Aaloc | 1-219:5975 |
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