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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:824662..827883- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043901 ID=XLOC_043901|Name=XLOC_043901|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3222bp|location=Sequence derived from alignment at sc0000111_pilon:824662..827883- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATTTTTTGTTGGAAACCCTCTGTTTTCTTTTTATACATCTTCTA
CTTAATATTTGTCGGGCAAGTTACCACTGTTCCCGATCTAGTGAAGAAAA
ATCAAAATGGTAGTGATATTGACCAGTTTGGCGTTACCATCTTTAACATC
ACTAATGACAACGCCGATCCAGTTTGCGGGGATGTTTTGACACTTGATGG
CAAAAATTATATGGAAAATTCATGCGCAAAGTATTTAACAAACATTGATG
GTATAAACATGATATCAGATTTCAAATTTTTTGGGAGACCTTTTGATCAG
TCTGACGGTACGACTAATAGCGGCCAAGCCAAGGTAAGACGTAAAATAAG
TTTTTATTTTCTAGCAGCTTCTTTACAAGTGCTAATTATAGGGGTTAGAA
AAAAAGCTGCCGAAGAAAGGTGCTTTGACTATAGTCAGAAAATTTCTTAA
GGGATTTGAAGATGAAACTTTTGTTTTGGTTTCCTTGACACTTTTAACAA
AAAATTGCCTTTGCAAGTTGTTTGGTAATTTATTCTGTCAATAGTAATTA
AGAATTTAATTACAAAAATGACGTTGTGAACTTTAGAAAAACGTCAATAG
AATGTTCTACTACCATCTTAAAACAAAAATATGGTAATATTTCAATGGGT
ATCTAACTTTTTTTCGTTCGAATTCTTTTTAATTTTTTTGGGGAAATTTT
TCTAAATCGATGAAAATTTGGTCCTCAAAGTTGAAATACTTTTCATTGCG
ATTTTTAAATTTTCAGATTCAGGAATAGTTTGGCCTAACAGAAAATGTAT
AACATACCATAGTTTTTGTTGGCTACATCAGTATATTCACTATGGTCAGA
GCCCTTAAATCTAGAAGGGAAGAAAAATTGTCATTTATATATTCCATATT
TCTTTTTCATCATAAACGTGGAGCGATTTAGTTGATTATAAAAGGGGCGA
TACTTCTGAACTTTTGCCATATACATAGAGCAAAGGAGAAAAAAATGAGA
GAATGTCTTGAGAATTATTTTTCTGATAATGTCAGCATTTTTTTGTGAAA
ATTTTATCTATAATGAACTCTTACACATTATATACCACTATAGATACATT
TCAATGGGTTCTTGTCATTTGGTACATATTCACAAAACATTGCAAACAAA
CAAGCCTGTTTTCACTGGGATAAATCACCATCACCTTCAAAATACCTTTA
TAATTTTCTGGCACCCTATTGGATGAGGTGAGATTTTATCTTATTTGTTT
GTAATTATTTATGTAGACCAAATCTCCTTCGTGAGAGGAATTCTCGCCAA
GATCAAAGTTGCATATATTTTTTTACAAGCAGCCAAGTCCCTAAGGGCCG
GCTAAACAACCGGCAATTGACCAACTTACTTAGCAACCCTGGATCCTTAG
ATTTTATGTAATTTGAATCGACAAACTGACCCGGGAAAAAATTTATAAGT
CTCTTTAAACGAGGCCAAAAATAGTTACAAATTGGCAAAATGGACCCACT
GCAGCATGTACAATATTTGGATGAATATATTTTTTTAAAGACAATGTATT
AAAATATGCTGAAAGCTTTTGGAACAGACTTTTTTGGAATTCAGACTTTT
GGTGACAATATGTCTTAATTCTTTATTAACAAGGTATTTTGAAGGCTCAG
TCCATTTCTTCGAATTATCAGAAACAGACCATAGCAACGATTGGGAGACC
ATCTTTGCAGATTTGCAACAAACTGGATTCAATCTTGATACAAACTCGGC
GAAGGAAAGAATTTTAGTTTTTACATGGCTTCGGATGTCTTCGGATGGTA
CGAAAAATGGAAATGTTTTCGAGGTAAGCGTCCGGTTTTTGATAGGCCTT
ATTCATGAACAGAAAAGTTGATATAAGTTAACTCAATTCAAGTGTTGAAA
GGCTAATTTTCATGGAACTGTATCACTCTGGGTTTGATGTTTCTTTCATT
TTGAGTGCAGGAAACCTCAAAGTTGGACAATAAACAATCATGTTTATCGA
TCGTACGTTCGACAAAAAATTAATTAAGAAACAGGCCCAGATACAACAAA
ATGCATAATTAGTAATTAGATTTATATCAGCCCTAGAGACAGTTTCATAA
GCCCGGAGGGTGAGTAAGGTAAGTAATGGCGGGTGAAAAGCAAGTTTCGA
TATTTGACGTACGGCATTATGTTGGCTTTGCTTATACGGGTATTTTGGTG
TTTTTCCCGTACAGGGCAAAGTAGACACAACGACATGCACGGGCAGCCCT
GCAACCGTAGCCGTAGAATATCTCCGATACATAATCTCGCTATTTGTTTA
TACTTCTACAGGAAAAACTGATGAACACATTCCAATTGTACTTGATCTTA
CATGGCGGTGTAACATACGCACAATTCTACTACAGAGCTTTAGATACCAA
TCATTTAGTTATCGATGATGATGTTGGGACAACTTGTTATGGGCAGGTAA
GATTTAAGTCACTCCAAAGTAGCTCTGATGAAGGCAGTTACACATAATTT
TTAAGGATTACAATAATCGAAATGAGCCTCATGATTCTTGTTTACACTGT
AGATGAAAGAACGGAAAACTGAGTCTTTTTAACTAAAGAAAATAATCGAA
GTTTTTGGGGCTGGACATTAGTAGTAAAAGTTCTTAATGCTTTTTTAAAT
CTTAGCCTTTTTATAATCTTAGTATTTCTTATAAAAAAAATTCTTCTTAA
AACGATGTGATGAAACGCGATTGTCATCCGTTTCTTTCACGAAATTTTGA
TCGTTAATGGAACTTTCGTACGACCATGTTCTTTTTCATCGCTCCCGGAT
GAAAAGAACGTGAAAAAGCGTTCCCATTCCGATGAAAATTAAACGTTTTG
CTGGCGATTTTTTTGACGCGACGTTCACACCGTCTCACTAAAAACCGGGA
TTTCTCATCTCGTTTCTTGATGAGTTCCACTTTGACGATTTTTGAAAAAG
AGAAGCCTTTCAAGTGCTTTGACGCAAGTTCGATTATTTTACTACTGCAG
GAGCTTCGAAAGTTAAAAGTGACGTCAAAAATCGAATGTTTTGGGCAAAA
AAGTTGCAAAGTGGAATAGACTAATGCGTCAAAAAAACGCGGGTGACGTC
TAGTATAGGCTTAGTGTTTCGGAACCGTTTCGTTTTTGAGTGAAACGGAG
CGTAGCGTGTGAACGTGGTCTTATTTCAAGCACATTGAATGTAATTTTTA
GGTTGGAATAGCAAGAGATCTA Coding sequence (CDS) from alignment at sc0000111_pilon:824662..827883- >XLOC_043901 ID=XLOC_043901|Name=XLOC_043901|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1626bp|location=Sequence derived from alignment at sc0000111_pilon:824662..827883- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATTTTTTGTTGGAAACCCTCTGTTTTCTTTTTATACATCTTCTA
CTTAATATTTGTCGGGCAAGTTACCACTGTTCCCGATCTAGTGAAGAAAA
ATCAAAATGGTAGTGATATTGACCAGTTTGGCGTTACCATCTTTAACATC
ACTAATGACAACGCCGATCCAGTTTGCGGGGATGTTTTGACACTTGATGG
CAAAAATTATATGGAAAATTCATGCGCAAAGTATTTAACAAACATTGATG
GTATAAACATGATATCAGATTTCAAATTTTTTGGGAGACCTTTTGATCAG
TCTGACGGTACGACTAATAGCGGCCAAGCCAAGATGGAAATTTTTTGTTG
GAAACCCTCTGTTTTCTTTTTATACATCTTCTACTTAATATTTGTCGGGC
AAGTTACCACTGTTCCCGATCTAGTGAAGAAAAATCAAAATGGTAGTGAT
ATTGACCAGTTTGGCGTTACCATCTTTAACATCACTAATGACAACGCCGA
TCCAGTTTGCGGGGATGTTTTGACACTTGATGGCAAAAATTATATGGAAA
ATTCATGCGCAAAGTATTTAACAAACATTGATGGTATAAACATGATATCA
GATTTCAAATTTTTTGGGAGACCTTTTGATCAGTCTGACGGTACGACTAA
TAGCGGCCAAGCCAAGATACATTTCAATGGGTTCTTGTCATTTGGTACAT
ATTCACAAAACATTGCAAACAAACAAGCCTGTTTTCACTGGGATAAATCA
CCATCACCTTCAAAATACCTTTATAATTTTCTGGCACCCTATTGGATGAG
ATACATTTCAATGGGTTCTTGTCATTTGGTACATATTCACAAAACATTGC
AAACAAACAAGCCTGTTTTCACTGGGATAAATCACCATCACCTTCAAAAT
ACCTTTATAATTTTCTGGCACCCTATTGGATGAGGTATTTTGAAGGCTCA
GTCCATTTCTTCGAATTATCAGAAACAGACCATAGCAACGATTGGGAGAC
CATCTTTGCAGATTTGCAACAAACTGGATTCAATCTTGATACAAACTCGG
CGAAGGAAAGAATTTTAGTTTTTACATGGCTTCGGATGTCTTCGGATGGT
ACGAAAAATGGAAATGTTTTCGAGGTATTTTGAAGGCTCAGTCCATTTCT
TCGAATTATCAGAAACAGACCATAGCAACGATTGGGAGACCATCTTTGCA
GATTTGCAACAAACTGGATTCAATCTTGATACAAACTCGGCGAAGGAAAG
AATTTTAGTTTTTACATGGCTTCGGATGTCTTCGGATGGTACGAAAAATG
GAAATGTTTTCGAGGAAAAACTGATGAACACATTCCAATTGTACTTGATC
TTACATGGCGGTGTAACATACGCACAATTCTACTACAGAGCTTTAGATAC
CAATCATTTAGTTATCGATGATGATGTTGGGACAACTTGTTATGGGCAGG
AAAAACTGATGAACACATTCCAATTGTACTTGATCTTACATGGCGGTGTA
ACATACGCACAATTCTACTACAGAGCTTTAGATACCAATCATTTAGTTAT
CGATGATGATGTTGGGACAACTTGTTATGGGCAGGTTGGAATAGCAAGAG
ATCTAGTTGGAATAGCAAGAGATCTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:824662..827883 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 793-813:22 |
| Aaloc | 658-792:912 |
| Aaloc | 469-657:1589 |
| Aaloc | 334-465:2130 |
| Aaloc | 1-333:3223 |
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