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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:728150..733730- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043899 ID=XLOC_043899|Name=XLOC_043899|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5581bp|location=Sequence derived from alignment at sc0000111_pilon:728150..733730- (Clytia hemisphaerica_ch_hm2_pilon) TGGCTGGAAGAGATTTTGGCACTGAACTGGCAAATGCCTATGTCAATGAG
GTTATTTCTGATGATTAATACCTCGTGCTGGCTGATGCTACAGAGGTAAA
TTTTGTCAATTAATTTATTAATTAATTTGTCAATTGAAAGTCGACACTAA
GTTTTCCCGATAAGTCGAATTTGCTTTCCCGGGCCGTCGTGATGTCACCA
ACCTTTGCATTCGCCGTAGCGCTAGAAATCGAATTTACATTATCTCGCTA
TTGAAAGGTTTTGTGACTGAAATTGTCATACCTGCGCTGAGGAAACTAAA
GCGCCAGGCTTCAGAGGGCTGAAATATCATTAACCGTCTTGTTTATTGGG
CGACGTCATTTGTGGCCCGCTCGGAAGGTGCTAAAAACTTGTTAAAGTCA
TTGCATTGAAGCGGAAAGACTTGGCTGACGCTAGAAAAAACTGATATGGA
TAATAATGGTAATAGCGTAAAGTTTTCCGCTTTGCGTCGGGCCCAAGGGA
AACTATTGGGCTAATAATCAAACTGAGCGGGCAGAAAATAACAACAACGA
CCTCAAACTGAACGTTATATCCTCAAAAGGCCATAACCTTTTGGTTCTAT
AAATTAACCTGCGTTCGTTCGTTCATTCGTTCGTTTTTTTTGTCGATCAG
CCAGGTATGCCCGTAAAAGTATCACTTTGTTTTAATGGATTTTTGAAATC
TACATGAAATACTGCGCTGATTGGGCAAGTATTTAATTGATAGGCAATCA
CAGGTTTCGTTTGAGTGTCCGGTTTGAGCTCTCTTAATGTCAGAGAACCT
TATGTATACCAGAACAATTATCTTATTATCATATAACACCCATATTGCTA
ACACGGATAATGAACGGCTTTAGTCTAAGGGTGTACGAGTCATTGACTTC
CGATCCCGAAGGACTAGACTCGAGACTCTTATTTTCCATCCAGAACGCCT
GCACGTGGTTTTTACACTAACTCTTTTACTCAAAAGCAAAGAAACCACTA
AATACAATTCGTCGTCATGATTACGGAGCCTTCTGGATGGCTTGCCTAGG
AAAGGTTAGAGATCTTACTCCAGCCCTTCGGACTTCAAACTCAATGGTAT
GGGTTTGACGGTGTTTATTATTTTTTCTTGCCAATGTTTCGTTATTTGAA
GGAAAAAGTGACGGCACTTCAGTGTTGATTGGCGATATACACGTATACCC
CAATGTACAAAACCCCGGGGGGGGGGGGGTACTTAGGCAAAAATAGGTGC
TGGGTATGTGCGGACGGTAAGGGTCGGGTTTTTCACCTTTCAAAGTCTCT
CTAAGGGTTACAAAAATCAGGAAATTTCAAAGTAGTCTCTCTAAGGGTGG
GAAAAATCACGATTTTTAGAAAAAAAATTTGATTTTGAGAGAAAAAATTA
CAAAAAAGTCTCACTAAGGGTAGGAAATTTTTGAAAATCAGAGAAAATTT
TTCGAAAAAGTCTCTCTAAGGGTCACTTTTTCACTAAAATTTGGTCTCTC
TAAGGGTCGGTTTTCGGAGGTCCCGTCCGCACATACCCCTCATTCACCAA
CCTTAGTACCCCCCCCCCCCCCGGGTACAAAACCTATAATACCGAGTTTA
TGTATGTGTGTTTTCTGCAACGGAGGTGGTAAGGTTCTAATTTGTTTAAA
TCCTGACTGACTGATGAGGACGACGGTATATCAGCACTTTTACCGTCCTC
GATTTTGTGGGTCAAAACTGCGGTCTATTCCAAATCCTTCAGTCGCTTTA
CCGTCCTCAAAAGTGCAAATATACATAAACTCGCTAATGTGCAGATAGCT
GACATTATCTATCCCGATTCTCACAATTTCATTGGCCAAAAGACGTCACG
TGTAGGTTGGATACTTTAATCGTAGAAATTTTAGCGAGACTCATTTTAGC
GTTTTAGCGAGTTTTCCCTATTTTCGCTAAAATAAATCTCGCTAAAACAC
GCCGAATCGCCAGATCGCTAAAATTTATCCACGCGAAATTTCTGGTTATA
TTGCCTTGATACATTTTTATCAATAGGAAGAGTTTCAGTGCAAAGAAATG
CTAGAAAACGAATTCAATCAATAATGTAATGCGAGTATTCGCTAAAATTT
ATCCACGCGAAATTTTTTGAAATCGTGATTCGCTAAAATAAATCCAAAAA
AAATCAAGATTTTTCTGGCTCGCTAATATACGATATCTCTCCTCCTTGCG
TTCGATTTCGAATCAAAGAAGTCGCTGCAATTCATCGAACGAACTTTTGA
ATGTTTTGTTTGAGCCTCAGTAGTTCTTGGTTTTGACAAATAAGTGTGGC
GTTGAAAGGACCTCAAGAAAGAAAAGATTCTTTTATATTTAAATGTTAGT
TCTTCGCTCCTCATAACTCTACATGCTCGCTGGTCGCTGGTCCATAAGTT
TTGATTTAGTATTGAAATGAAAATGGTATTGGAGGACCCGGGCATTGATC
CCGGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATTTGAGCTAGTCCC
CCTCTAATAATAATTACAATTTCAACTATTTAAACTTAATTTCTGTTTAT
TATTTCAACAAATTAGTGTTTTAATCTGTTTGTTTGAGTTCGGCTGTCAC
AAATTTGTTTGATGAAATAATGAGCCTACACGTTTTTTTTTTTATTAGAA
CGTCGAAAATTTTTGAAGCCTTCCGATGTTCTAAACTTTTTGAGTTTTAA
GCCTAAAAATGTTCTTAAAATGTTCTTATTTTCACCATTTTGTGAGTATT
TTTGTGCAATTTCCTAAGAAATTGGGTGTTTTCGAGTCCACAAAGCCTTA
AAATGTTCTTAACATGTTCTTAATATTTCGGGCATCGAAGCCTTATGTTC
TTATATACTTTGTTCTTATAAAAAAAAAAACGTGTACTCCACTTAAATAA
GGTTACCCTGGCAACCCTTACAATCGTGTATTTGCTGCTGTACTACAATA
CTGGTAGTGTTTTGTGGCGTTCTATTTTATGAATCTGTAGACACACGTTG
TCTGTCCGTCTGTCTTCAGGGTCCTTTGAACATTCATTATTATGGGCCAT
TTTAGGGACAGTTTTTTATTTTCATTAGAGAAACAAGGGCCCGGGGGGGT
ACTAGGGCAAGATGGGTTACGGGGATGCTCCGCTGGTCAGGGTACCTTTT
CTAACCTCCACGAGTCCCAGGTAGGGTCGCAAAAACACCAAAATAGAAAA
ATCAGTCCCTCGTAGGGTGCCTTTTTTTGGAAAATTTGGGGAAAAAGTAG
AAAATTTTGGAATTTCAGTCCCATTCAGGGTCACTTTTTTCGCAAATTTC
GAGTCCCACGTAGGGTCCATTTTTCGAACCTCAGCGGAGCACCCCCGTCG
GTCGACAAGGGTAGTACCCCCCCCGGGAACAAGGGACTGTATCTCTCTAT
AGAAACTCTTTTGTAAACTGCGTCTTAAGTTTTTTGTGTTTTTTTATTCT
ATTGTTAACCCGACAGAAACTTCTGTTCTTCTTTTGTTCATTCCCAAAAT
GTGTAAACAGAAAAAACTCTTCTTTCAATCTTTTAATCATCTTTTATTTA
CTCACTTTCATTTTCGAACAAAAGGGAAAGACATTTTACACATAGATTTC
TTGAATGACATTTTTGAAGGAAGGATTTACTATATTTTACCGGGCATTTT
CCTCTCTACTGCGAAGCAAACTTTTGCCTATATTCAGTAACCATGTCTTT
GAAAAGCGAACGGCCGCACATATGGTCATTTTTAAATCCGAGTGCTTCCC
CAGGCGTCAAAGGGACTCAAAGATATTCTATCTAGAAAGATTTAACAAAG
GGGATCGGCATGTGGTACCCAGGGAAACAATACACATTCGTTTAATGTTT
TTGATATGTTCCCTATTTTTCAGCTCTTTGTTGATGACGAAAATGGCTAC
TAACAACTCAACAACCCGAGTAAAGAAATTCTTTGAACTAACTTTCCTGG
CTTTGTTGGTTATAGTTTTCTGTGTGTTGAGGCTTTACAATAGTGGTTAC
AGTGTATGGACATTCCACACCATCAACAGAACAAAGGAAACAAACCCACG
TGATCTCAAATTAACCAATCAGACATCAAAGTTTACAACAACTTCGAAAC
CAGATTTAAAAATACCATGGAGATATCATAGCGATGACGATGGTTTTGTG
TTTCCACGTGACGAAAATTATTTGACGTCATCAAATCCACATTTGACGTC
ATTCTCTGGTTATTTGACGTATGAACCCATTCAACGATCTTTAACTCGCC
AATTACTCCAGTTCGAAAATGCAGTAATATTCGCGTATTTCTTAAAACGT
ATTCTCATAGTTCCACCAATTATCTTGATCAAAGAGAACAAAACAATCGA
AATTCCTGTATCCACTATCATAGATTTCGATTTATTATCCACGATGGTGC
GTTTAGTAGAAATGCCTACAAATTATAAAGAATTGTTGAACATTAGAACA
ACTTATGAGGTGTGCCAGGATCCTCGACTTGGATTTTGGCTTGATTATAT
ACCATCACCAGAGAATATTAATTCGTGGCGTACATTGAAGCAGCAATTAT
TTTCCCCGTTGAAATTACGTTTCGATTATCACAATCAAACAAACTATTGG
TGTCCTGGGACAGAGAAATATTTTGACCGTTGGGGGCCACCGTTACAAAT
TAAAGCTTTATATCGTGGTGTCCTGACTGAGCTATATGAGCGATCTGAAG
ATTTGATTATGTTTCAGAGTTCTACACTGGACACTAGCGATACACGGTTC
TTCGATCGCAAACGAGTCCGTACAGCGCAGGAAATTCTACTGTTTTATAT
AAGGTTTTCGAGCAGAATAACACGATATACAAAACATTTAGCAGACGTTT
TAGGCTATGGTTATATTGCTATACTGGCAAACGGAATCAGCAACCGAAAC
ACCAATTTAAACCAATATTTAGTTGATAGTTTACGTAAATTCAATACAAC
TTCAATGACTGTGTTTATTGTTTCCGGTAGAGTGAAAAAGACTGCTTTTC
AGGGTCTACGAGATGCAGGCTACAATCTTGTCTTCGCTGACCAATTTACG
GAACGTATTAAGAAATGGTCCTTGAGGAAAGAGATATCTCACGTTTTTTC
GTTACTGTTATGTGCATATGCAGCTCATTTTATAGGTTTCCCTGGAACTC
CTGATTTGTATTTTGTCGAACATTTGAGACTGCAAGATGTCAAAATTGTA
GATGGCTTGGTTGCTGAGAAAATTAACGTTAAATGGGCTAAACATACTAC
CAAAAGAAAAGCGGATGATCGTAAAATCTTCCAAAAAAGACCTTCTTTGA
AACCGTTGGTTAAGCAAAGTAACACAAAAAAGGAAAAACAGAAAATTTCT
GCTTCAGATCTCGCTTCAGATGCTATGAAGTCTACAATAACCTCCTCGAA
AATACAACAATCAAAGATTGGTACTCACCATAAAATAAAACAGAATAATC
GACATTCATCATTCTTTAAAGATGGAAAACTTTACAATATTGCGTGCACT
TTTTGTAATTATGTCACTTATGTGACTGGACAAAATGGTTGTCCAACAAT
GAAAGTTCAATGTTCTTCCAATAAATTATAA Coding sequence (CDS) from alignment at sc0000111_pilon:728150..733730- >XLOC_043899 ID=XLOC_043899|Name=XLOC_043899|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3606bp|location=Sequence derived from alignment at sc0000111_pilon:728150..733730- (Clytia hemisphaerica_ch_hm2_pilon) TGGCTGGAAGAGATTTTGGCACTGAACTGGCAAATGCCTATGTCAATGAG GTTATTTCTGATGATTAATACCTCGTGCTGGCTGATGCTACAGAGTGGCT GGAAGAGATTTTGGCACTGAACTGGCAAATGCCTATGTCAATGAGGTTAT TTCTGATGATTAATACCTCGTGCTGGCTGATGCTACAGAGCTCTTTGTTG ATGACGAAAATGGCTACTAACAACTCAACAACCCGAGTAAAGAAATTCTT TGAACTAACTTTCCTGGCTTTGTTGGTTATAGTTTTCTGTGTGTTGAGGC TTTACAATAGTGGTTACAGTGTATGGACATTCCACACCATCAACAGAACA AAGGAAACAAACCCACGTGATCTCAAATTAACCAATCAGACATCAAAGTT TACAACAACTTCGAAACCAGATTTAAAAATACCATGGAGATATCATAGCG ATGACGATGGTTTTGTGTTTCCACGTGACGAAAATTATTTGACGTCATCA AATCCACATTTGACGTCATTCTCTGGTTATTTGACGTATGAACCCATTCA ACGATCTTTAACTCGCCAATTACTCCAGTTCGAAAATGCAGTAATATTCG CGTATTTCTTAAAACGTATTCTCATAGTTCCACCAATTATCTTGATCAAA GAGAACAAAACAATCGAAATTCCTGTATCCACTATCATAGATTTCGATTT ATTATCCACGATGGTGCGTTTAGTAGAAATGCCTACAAATTATAAAGAAT TGTTGAACATTAGAACAACTTATGAGGTGTGCCAGGATCCTCGACTTGGA TTTTGGCTTGATTATATACCATCACCAGAGAATATTAATTCGTGGCGTAC ATTGAAGCAGCAATTATTTTCCCCGTTGAAATTACGTTTCGATTATCACA ATCAAACAAACTATTGGTGTCCTGGGACAGAGAAATATTTTGACCGTTGG GGGCCACCGTTACAAATTAAAGCTTTATATCGTGGTGTCCTGACTGAGCT ATATGAGCGATCTGAAGATTTGATTATGTTTCAGAGTTCTACACTGGACA CTAGCGATACACGGTTCTTCGATCGCAAACGAGTCCGTACAGCGCAGGAA ATTCTACTGTTTTATATAAGGTTTTCGAGCAGAATAACACGATATACAAA ACATTTAGCAGACGTTTTAGGCTATGGTTATATTGCTATACTGGCAAACG GAATCAGCAACCGAAACACCAATTTAAACCAATATTTAGTTGATAGTTTA CGTAAATTCAATACAACTTCAATGACTGTGTTTATTGTTTCCGGTAGAGT GAAAAAGACTGCTTTTCAGGGTCTACGAGATGCAGGCTACAATCTTGTCT TCGCTGACCAATTTACGGAACGTATTAAGAAATGGTCCTTGAGGAAAGAG ATATCTCACGTTTTTTCGTTACTGTTATGTGCATATGCAGCTCATTTTAT AGGTTTCCCTGGAACTCCTGATTTGTATTTTGTCGAACATTTGAGACTGC AAGATGTCAAAATTGTAGATGGCTTGGTTGCTGAGAAAATTAACGTTAAA TGGGCTAAACATACTACCAAAAGAAAAGCGGATGATCGTAAAATCTTCCA AAAAAGACCTTCTTTGAAACCGTTGGTTAAGCAAAGTAACACAAAAAAGG AAAAACAGAAAATTTCTGCTTCAGATCTCGCTTCAGATGCTATGAAGTCT ACAATAACCTCCTCGAAAATACAACAATCAAAGATTGGTACTCACCATAA AATAAAACAGAATAATCGACATTCATCATTCTTTAAAGATGGAAAACTTT ACAATATTGCGTGCACTTTTTGTAATTATGTCACTTATGTGACTGGACAA AATGGTTGTCCAACAATGAAAGTTCAATGTTCTTCCAATAAATTATAACT CTTTGTTGATGACGAAAATGGCTACTAACAACTCAACAACCCGAGTAAAG AAATTCTTTGAACTAACTTTCCTGGCTTTGTTGGTTATAGTTTTCTGTGT GTTGAGGCTTTACAATAGTGGTTACAGTGTATGGACATTCCACACCATCA ACAGAACAAAGGAAACAAACCCACGTGATCTCAAATTAACCAATCAGACA TCAAAGTTTACAACAACTTCGAAACCAGATTTAAAAATACCATGGAGATA TCATAGCGATGACGATGGTTTTGTGTTTCCACGTGACGAAAATTATTTGA CGTCATCAAATCCACATTTGACGTCATTCTCTGGTTATTTGACGTATGAA CCCATTCAACGATCTTTAACTCGCCAATTACTCCAGTTCGAAAATGCAGT AATATTCGCGTATTTCTTAAAACGTATTCTCATAGTTCCACCAATTATCT TGATCAAAGAGAACAAAACAATCGAAATTCCTGTATCCACTATCATAGAT TTCGATTTATTATCCACGATGGTGCGTTTAGTAGAAATGCCTACAAATTA TAAAGAATTGTTGAACATTAGAACAACTTATGAGGTGTGCCAGGATCCTC GACTTGGATTTTGGCTTGATTATATACCATCACCAGAGAATATTAATTCG TGGCGTACATTGAAGCAGCAATTATTTTCCCCGTTGAAATTACGTTTCGA TTATCACAATCAAACAAACTATTGGTGTCCTGGGACAGAGAAATATTTTG ACCGTTGGGGGCCACCGTTACAAATTAAAGCTTTATATCGTGGTGTCCTG ACTGAGCTATATGAGCGATCTGAAGATTTGATTATGTTTCAGAGTTCTAC ACTGGACACTAGCGATACACGGTTCTTCGATCGCAAACGAGTCCGTACAG CGCAGGAAATTCTACTGTTTTATATAAGGTTTTCGAGCAGAATAACACGA TATACAAAACATTTAGCAGACGTTTTAGGCTATGGTTATATTGCTATACT GGCAAACGGAATCAGCAACCGAAACACCAATTTAAACCAATATTTAGTTG ATAGTTTACGTAAATTCAATACAACTTCAATGACTGTGTTTATTGTTTCC GGTAGAGTGAAAAAGACTGCTTTTCAGGGTCTACGAGATGCAGGCTACAA TCTTGTCTTCGCTGACCAATTTACGGAACGTATTAAGAAATGGTCCTTGA GGAAAGAGATATCTCACGTTTTTTCGTTACTGTTATGTGCATATGCAGCT CATTTTATAGGTTTCCCTGGAACTCCTGATTTGTATTTTGTCGAACATTT GAGACTGCAAGATGTCAAAATTGTAGATGGCTTGGTTGCTGAGAAAATTA ACGTTAAATGGGCTAAACATACTACCAAAAGAAAAGCGGATGATCGTAAA ATCTTCCAAAAAAGACCTTCTTTGAAACCGTTGGTTAAGCAAAGTAACAC AAAAAAGGAAAAACAGAAAATTTCTGCTTCAGATCTCGCTTCAGATGCTA TGAAGTCTACAATAACCTCCTCGAAAATACAACAATCAAAGATTGGTACT CACCATAAAATAAAACAGAATAATCGACATTCATCATTCTTTAAAGATGG AAAACTTTACAATATTGCGTGCACTTTTTGTAATTATGTCACTTATGTGA CTGGACAAAATGGTTGTCCAACAATGAAAGTTCAATGTTCTTCCAATAAA TTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000111_pilon | genome | sc0000111_pilon:728150..733730 - |
Properties
| Property Name | Value |
| Aaloc | 97-1803:1708 |
| Aaloc | 1-93:5582 |
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