|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000026_pilon:1462959..1467012- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043887 ID=XLOC_043887|Name=XLOC_043887|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4054bp|location=Sequence derived from alignment at sc0000026_pilon:1462959..1467012- (Clytia hemisphaerica_ch_hm2_pilon)
GACATTTATTGCAGTTTGGAGAATGGTAGACAAGACTTGTATGTGTCAAA
TAAGAACATGGACACTTTTCTTAAGAGTTTTTTCATAGTTGCTTTAAGTT
GTATAGTTTTTCAAAACAGAGTGCATATTAAAAAAATCAGCGTTCAGCTT
TACGAAGAACATTTAAAAAGTTTTTTCAAGGACCCGACTTGGATTAACAA
GCTACGGGAAGAAGATATTTTCGAACTTGCAAAGATAAATTTAACAAGAG
CCGAGGAGAATGAAGAAGGCTTTCAAGAAGTCTCCAAAATACTATACGAT
GCTTTTAAAGGTAAAGATCAGTTTTCGGTACACTAAGACCAAGTTTGCGT
CGGTTAAATGGACGATGCAATATCGTGATGGAACAATTAAGCGACGGTAG
TGAGCACGGAATTTTTAGATTCGTTCTATTTTTCACTAAAAAAGCTTGCA
AAATCCGGCAAAGGAGTGCAAAATAAGCAATATCTACTGAAACATTTGAC
ACTTCTCGTCTTTTGGTGCCCCCTTTCTACCTCCACTTCTACCATTAGAC
TGGAGCAATGGTGAATACAGCTAATTTTCAACTCCTATTTTCACCATTTT
CTTTTTGTCAACAAAAGGGGTGTTGATATTTTCCAATTTTGACTTTCCAG
TTTTGACTTCCTTAGGTGTTGGATTCGCATATGTTGTCGAACTAAAGGAT
TTCAATCCGGACGAACTGTTATACTGGACAAAATGGTTTTTCAATTTGCC
ACCCGATGTAAAAAAAACAGTGACCAAAAGTACATGGCAACCTGACAATG
CGAACACGTATAGAGGCTTATATCCAAGTATTCCTGGAGGTCATTCTCAT
AAGGAAGCTTTAGAAACAGGTCTTTTCGATATGGAGGAGCCATTAAGAAG
AAAAGCCACTTTGGAAGATCTTGTAAACACAACTAAGAAGGATGGAAAGT
AAGTGATGTCTTTTAGTAGGTTCGTCTTGCAAATCCTGCCTTTGTAACAC
GCATGCATAAATTGTCGCTCTGTTAAACTACATGTAGTTAATTCCCGTGT
TAAACAAGGAGGAATGAATCCGTAGGGGTGTTTCAGTCGATTTCGGTCGG
GGTTGTAGACGACAAAATTTGTCGTTCTTTATGAAATTTGTCGTTCTTTT
TGTCTATTTTTAGTAATGCAGAATTTGTTACATAGACCCCTTTCTTTCGA
TCACACCCCTGTCTCAGCACAAAAGGTTCAAATTCTCCTAGATATAAAAA
ATATACTGAAGATTGCCAAGGGTTAAACAACATGCTTAAGAAAGACAAAA
AAAGTTTCATATACCCGCATCACATGTTTGCGTTTTTTTTCCAACAGAGG
AAAATGGAAAATTGATTGCAATAATTTAGGTAGCTTTCATCATCAAAAAG
ATTATTTTTATCGAAAAGATTTAAATTACCGGGAACAACAATGTGATTAA
AAGTAGTCTCAGGTTCCAAAATCAACGCCCCCCCCCCGCTTGTTAATTTT
TCGAATACTTTCCAACCCTCCAATCCTTATTAGGAAATCCCCCCCCCCGT
TTATTAATTTTAAAGAATTTTTTCAGCTTTCAAAAAGAAAGGGTCCTTTA
TTCTACTCTAAATATCCCGATGTTAGCCTATATTTACCTTATTTTGGGGT
TTTCGTAATTACAATTTCCCCGTTTATTAAAGTTTTGAAAAATTTCCAGC
CCACCCCCTCCGTTTATTTGGAACCTAAGAGTAGTTAAATGCCATCAATA
TTTTCTTCTCTTGTAGATTATATTGTCGTAACATTTTGGAAGAGAAGAAC
CCATGGCCCATTACTGAAGATCAGAAAATGGATGATGGATTTCGAATATT
CATGCAAAAGAATTATAAAATCTATGAAAATGGCTGTCTGACTATTATGA
GGATGCTTGCAAATACTTTAGGTTTACCAACAAACAAATTCTAATAGCGA
GTTTATGTAATTGCAGCTTTGAGGACGGTAAGGTGACTAGCGCAATTCGG
AATAATCCATAGCTCAAAAGGCCGGTCTCCACTTCCGCGCTAAGATCGCC
CTTTTGGCTTCAATCCTTTTTGCTTGGAAAATAGATTACGTCATAAAAAT
GTAGCGCACGTTCGAAAAAAAGACCGGCCTTAAATGCATGCTGGTTTACC
ATTGTCCTCAGTTAGTCAAGATCTAGTCAATTTAGAACCTTACCGCATCT
CCGTCACAGACATAAACTCGGTATTACTTCAAATAAGGCCTATAAGAAAC
TCCTAAACTTATAATAATTTATTGCTTTGTTTACCAGTTAACAACATCCG
TTAGCGATGCTATACACCTTTAAAAATATAATTCATTGCACTACGATAAT
ACACATTTTCGACCCGTCGCACGGTCAGGTGCGTGCCACTTAATTATATG
ATTATCTCCCTAAACTCGATCCAATCCTGCTTTTACACATTTTTCTATTG
TCCATAGGTGTGAAAAAAGGACTGGGACGGTTTTAGTGGGATAAAGCAGA
CAAAAAAATGCCCGCCTGGCAATTAGTGGCTACGGTCAAAAAGGTGTATA
AATTGGAAAATGAAATAAAAATTGAAGAAGGAAATAACGGACTTATATGC
TTTAATGCTAGCCGTGTTATACTTGATGGGCTTGTTTGTTTTTGTAGGAT
TTCTATAGCACGTAATCTCAGGGATTTGGGAAAATAAGTAGATTCATCGA
CTGTAAGAGCCGACCAACTGACATACAACGTTGTTTCAACGTCTAAAACG
TCCATATAACACTAGATGAACGTTATGAACGTTGAAACAACGTTCTGTGC
CAGCTGGGTAGGTAAAAAATGATTTTTCTTATCGGATTTTTCTTCATCTT
CTGCTATTTTAGGGTTCGAAAGAAACTTTTTCGATGGTTTATTGTTTGGA
CCAAAACATCTTTCTACGCATCGTTTGATTCACTATCCATCTCGACTTGG
TGATCCAGCCTCGATTCCAAAAGAAGCTTGGGATGGAGATCAAGCTATTG
TCACCGGTGAGTGGTCAAATAAGTAAATGGATTTTTTTTTCAGTTTAAAG
CTGCATGATCCAAAGCTTACACATCTTTTTTGTAAGAACTTCCGAAATTT
TTGAAACTTTTGGATGTCCTGAACTTTTTGAGTTTTAAGCTTGAAATATT
GTTTATTTTCACGATTCTGTGTTTTTGTGCAATTTCCTAAATAAGGTGTT
TTATGGTTTATGAAGTCATAAAATGTTCTTAATTTGCCCTAGATATTTTG
GTTATTGAAGCCTTGTGCTCTTATAAAGTTTGATCTTTGTAAAAAAACAT
GTATTCAAAAATACTTAAAGGGCATGAGATTAAAGGTTTTATTTTTACAT
AAGTGCTTCCGTTTCATATCAGACACATACTTCATATCAGGACAGTGTCT
TGCTATTGTTATATTATGCTTACATAAGCAAAAAAATGTTTTTCTTTTCC
TCTTTCTGACTAATCTTGCATCACATATGTGTCAATTCAATGTGAATAAG
CAAACATTCTCACTCTTATTTAAAAACAAAACCTTTAAGAGACATTAATT
ACTCATGTTTAAGCTTGTTTGGGTTGAACAGGTGGGTTATTGAGAGTCAA
CTGAGTGCAAATTGAGAATTTGGGAATCTTAGATGTTGAAATTTAAACTT
TTTTCTATTCCATCAAAATTTTAGGTGAACATTTTGATACTGGAATCTTA
ACCATCCTTGCAACCTTCGAAAATGCTGGTTTACAAATCAAACCTAATGG
TTACTCAAAATGGATAGACGTTCCTGCAAGAAAAGATCATTTGGTGATTA
ACATTGGTAACCTCTTAGCAGATATGGTTGAAAATCGTCTAGTGGCAACG
AATCATCGAGTCGTAGATATTGGAATCTCTCGGTACTCAGTCCCATTCTT
TTTAGAACCACGTTACGATGGAGATCTATCGAAAACTATTTTCGGTAATA
AGTTAAAAAGTGTCGGAGAGTTTACAACATTTGGTCGGTATATGACAAAT
CGAACGAGAATGTTTGCAGAATATGCGTCTATTGATTGGGGATATATTGA
CTAA Coding sequence (CDS) from alignment at sc0000026_pilon:1462959..1467012- >XLOC_043887 ID=XLOC_043887|Name=XLOC_043887|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2544bp|location=Sequence derived from alignment at sc0000026_pilon:1462959..1467012- (Clytia hemisphaerica_ch_hm2_pilon)
GACATTTATTGCAGTTTGGAGAATGGTAGACAAGACTTGTATGTGTCAAA
TAAGAACATGGACACTTTTCTTAAGAGTTTTTTCATAGTTGCTTTAAGTT
GTATAGTTTTTCAAAACAGAGTGCATATTAAAAAAATCAGCGTTCAGCTT
TACGAAGAACATTTAAAAAGTTTTTTCAAGGACCCGACTTGGATTAACAA
GCTACGGGAAGAAGATATTTTCGAACTTGCAAAGATAAATTTAACAAGAG
CCGAGGAGAATGAAGAAGGCTTTCAAGAAGTCTCCAAAATACTATACGAT
GCTTTTAAAGGACATTTATTGCAGTTTGGAGAATGGTAGACAAGACTTGT
ATGTGTCAAATAAGAACATGGACACTTTTCTTAAGAGTTTTTTCATAGTT
GCTTTAAGTTGTATAGTTTTTCAAAACAGAGTGCATATTAAAAAAATCAG
CGTTCAGCTTTACGAAGAACATTTAAAAAGTTTTTTCAAGGACCCGACTT
GGATTAACAAGCTACGGGAAGAAGATATTTTCGAACTTGCAAAGATAAAT
TTAACAAGAGCCGAGGAGAATGAAGAAGGCTTTCAAGAAGTCTCCAAAAT
ACTATACGATGCTTTTAAAGGTGTTGGATTCGCATATGTTGTCGAACTAA
AGGATTTCAATCCGGACGAACTGTTATACTGGACAAAATGGTTTTTCAAT
TTGCCACCCGATGTAAAAAAAACAGTGACCAAAAGTACATGGCAACCTGA
CAATGCGAACACGTATAGAGGCTTATATCCAAGTATTCCTGGAGGTCATT
CTCATAAGGAAGCTTTAGAAACAGGTCTTTTCGATATGGAGGAGCCATTA
AGAAGAAAAGCCACTTTGGAAGATCTTGTAAACACAACTAAGAAGGATGG
AAAGTGTTGGATTCGCATATGTTGTCGAACTAAAGGATTTCAATCCGGAC
GAACTGTTATACTGGACAAAATGGTTTTTCAATTTGCCACCCGATGTAAA
AAAAACAGTGACCAAAAGTACATGGCAACCTGACAATGCGAACACGTATA
GAGGCTTATATCCAAGTATTCCTGGAGGTCATTCTCATAAGGAAGCTTTA
GAAACAGGTCTTTTCGATATGGAGGAGCCATTAAGAAGAAAAGCCACTTT
GGAAGATCTTGTAAACACAACTAAGAAGGATGGAAAATTATATTGTCGTA
ACATTTTGGAAGAGAAGAACCCATGGCCCATTACTGAAGATCAGAAAATG
GATGATGGATTTCGAATATTCATGCAAAAGAATTATAAAATCTATGAAAA
TGGCTGTCTGACTATTATGAGGATGCTTGCAAATACTTTAGATTATATTG
TCGTAACATTTTGGAAGAGAAGAACCCATGGCCCATTACTGAAGATCAGA
AAATGGATGATGGATTTCGAATATTCATGCAAAAGAATTATAAAATCTAT
GAAAATGGCTGTCTGACTATTATGAGGATGCTTGCAAATACTTTAGGGTT
CGAAAGAAACTTTTTCGATGGTTTATTGTTTGGACCAAAACATCTTTCTA
CGCATCGTTTGATTCACTATCCATCTCGACTTGGTGATCCAGCCTCGATT
CCAAAAGAAGCTTGGGATGGAGATCAAGCTATTGTCACCGGGTTCGAAAG
AAACTTTTTCGATGGTTTATTGTTTGGACCAAAACATCTTTCTACGCATC
GTTTGATTCACTATCCATCTCGACTTGGTGATCCAGCCTCGATTCCAAAA
GAAGCTTGGGATGGAGATCAAGCTATTGTCACCGGTGAACATTTTGATAC
TGGAATCTTAACCATCCTTGCAACCTTCGAAAATGCTGGTTTACAAATCA
AACCTAATGGTTACTCAAAATGGATAGACGTTCCTGCAAGAAAAGATCAT
TTGGTGATTAACATTGGTAACCTCTTAGCAGATATGGTTGAAAATCGTCT
AGTGGCAACGAATCATCGAGTCGTAGATATTGGAATCTCTCGGTACTCAG
TCCCATTCTTTTTAGAACCACGTTACGATGGAGATCTATCGAAAACTATT
TTCGGTAATAAGTTAAAAAGTGTCGGAGAGTTTACAACATTTGGTCGGTA
TATGACAAATCGAACGAGAATGTTTGCAGAATATGCGTCTATTGATTGGG
GATATATTGACTAAGTGAACATTTTGATACTGGAATCTTAACCATCCTTG
CAACCTTCGAAAATGCTGGTTTACAAATCAAACCTAATGGTTACTCAAAA
TGGATAGACGTTCCTGCAAGAAAAGATCATTTGGTGATTAACATTGGTAA
CCTCTTAGCAGATATGGTTGAAAATCGTCTAGTGGCAACGAATCATCGAG
TCGTAGATATTGGAATCTCTCGGTACTCAGTCCCATTCTTTTTAGAACCA
CGTTACGATGGAGATCTATCGAAAACTATTTTCGGTAATAAGTTAAAAAG
TGTCGGAGAGTTTACAACATTTGGTCGGTATATGACAAATCGAACGAGAA
TGTTTGCAGAATATGCGTCTATTGATTGGGGATATATTGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026_pilon | genome | sc0000026_pilon:1462959..1467012 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 895-1272:379 |
| Aaloc | 751-891:1191 |
| Aaloc | 595-747:2288 |
| Aaloc | 313-591:3388 |
| Aaloc | 1-309:4055 |
|
