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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000348_pilon:174416..179173- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043883 ID=XLOC_043883|Name=XLOC_043883|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4758bp|location=Sequence derived from alignment at sc0000348_pilon:174416..179173- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTTATACAGTTTATTTGAACATGCAGCTGGCTATGCAATCTTTAA
AGTGAATGCAACAGAAGAGATTGGTGCTCTGCTACCTGAAGTACAAGAAT
CAGTCACTGATCTAGAACGTTTTGGAAGATTAGTAAAATTGGTTGCATTT
AGCCCTTTCAAAAATGCTGCAAATGCCTTGGAAAACATAAACAGCATTTC
GGAAGGTATATATCTTCACTCCCAAACAAGTTTTTTTATTTTTTCTTATA
TACAGCATATTTCAGCCATAGGATTTATTATCTAAATTTGTCAGATAATC
AATAAAATGGAAGCTTCCTGAAGCTTCAAATAATTTTTTTTTTACATTTG
GCAATTACTTTTTTATTTTCTGGTTTACGGAATCGCCGACGTTTTTTTTG
CAAAAATAAAATAAAAATAAAATTAGATTTTACAAATATTTTATTTATTT
ATGCTCTTCCGACCTTTTACTGAACAGCCATAAAAAGGAAACTTTATAGA
AAATTACATTTTATAAAAGCAAGAAGGGCAAGTAAAAGGGTCAGTGTCCA
GGCCTTTAATAACTTAAACACAATTTCTCTACTAAAAACGTTCTTTAATG
TATGTAAGTTTCTCAAAACATATTTTTTTAATTTTTTACAACATTAAAGT
TTGAAAAGAGCAATTTTATTTTTATTTTTTTCAAACGTCCGTAAACCAGA
AAATAAAAAAGTAATTGCCTTATCAAGTATTTTGTTATTTGAAACTGAGA
ATATTTGCTTTATCCACTACATTAAAATAAAGAAAATATGTGTATTGTTC
TCTCATGCATTATTTATTATTGTTTCTTTAGGGATGGTCCATGAGGATTT
AAAGGCATTCTTGGAAGCAAACATCCCTACTGGAAAAAAGAAAAGCAAAG
TTGCTCTAGGAATTTCTGATGCAAAGATTGGCGGAGTTATCCAAGAGGCT
TGTAATATCCAGTGTGAATATGGACAGACCGTTTCAGAAATCTTGAGAGG
AGTACGCCTTCATTTTCATAAAATGATACAAGGTTAGATTTTGTGTTGCT
TTTGATTACTCTTTTTTTTTAATTCAATCTTTCAATTCCACAGGTGTAAT
CAACTGTATCTTCTTTCTGCTTTTGGTCATTTTCAAAACATTTCATTTAC
TATGTAACTCTCTTATTTGCTAGGACTAACTGCTGAGACATCTGGCAAAG
CACAACTTGGTCTAGGTCACAGTTACTCCCGTGCTAAAGTCAAGTTTAAT
GTTCATCGTGTTGACAACATGATCATCCAGACTATTGCTCTTGTGGATCA
ATTGGACAAAGATATCAACACATTTTCTATGAGAATAAGGTTGGCTTTTG
CTTCAAAATCTTTATTTTGCATCTTATGTGATACTGTTTAGGTGATTTAG
TTATTTTAATACCTACAGATAGATAACTTATTTTGATCTTGAAGTTACGA
GTTTGAATGAGTCCTATTTTTACTTGAAGTTCATGTTTTGACTGGTTTTA
AAAGATTGTTAGGGAAAAAAGGAAGAAAAGTGTCATTCCAAAAGTTCTAG
TAAGAGGGTTGGAGTTAGAGATAGACGGAATTTACTCTCTATGTTCTCTT
CAATACCTTTTAGAGAATGGTATTCATACCACTTCCCAGAGTTGGTGAAG
ATTGTCAACGATAATTACCTCTATGCCAAATTAGCTCAATACATCAAATC
AAGAAAAGAATTGACGGAAGAAAAACTGGAAGGACTTGAAGAAATCGTTA
TGGACGAAGCAAAAGCTAAAGCTATTTATGTTGCTTCAAAGTCATCCATG
GGTATGTCCTTTGTTAATTTTAGTTAAAGTTAGTTCCATAAAATAAATTT
TTACTTAGATTTTTGTGAAAACTGCTAGAAAAAAAATCTTAAACACACCC
TCTTCTCACAGACCCGGTAGAATTCTTTCAGCCAGTGGGGGTAAAATTAT
AGTGGACTGAAACTGGATGGGGATTGATATTTTTTCCGATAACTTTTGAC
ACAATTGTTGCTAGAATCGTTGAAAAGAGTGATTCATTTAATATTACAGT
CAGTATTTTTTAATTAATTGTATATTAATGTCTAGGTATGGACATTTCAC
CAATTGATTTGATCAATATTGAAAGCTTTGCTAACAGAGTCATTGGTTTG
GTAGAATATCGACAAAAACTCCACGCCTACTTAACATCCAAAATGAACCA
AGTCGCTCCAAATTTGCAAGCTCTTATCGGAGATCTTGTAAGTATAGAGA
TATTTTAGAAAAGTAGAAGGGAAAATTTAAAGGGACTTAAAATACTGACG
AAATTTGTAAACAAACCGTATGCAGCGGTATACAAAATCAAAATAAATGT
CACGTGTCAAAATAAAAAATCAACACAAATATGGCTGATTTTGATTGTTT
CAATTGTTTTACAAGTTTGTTTTGAACACGTGATTTTAATTATTCTCTTT
AATGACACGTGATTCGCGCAATGAATGTTTACATTTTACTACTTTTATCT
CCCTTGAATATTCGGCTAGAGGCCTTCCCGTCTTTCTTGTTTTAGTTATC
TTATTCTAATGAATCTGAATGAATACCAATCACTTGTCTTCTAGGTTGGT
GCTCGTTTGATTGCTCATGCTGGAAGTTTAACAAACCTTGCAAAATATCC
TGCCTCTACTGTTCAAATTCTTGGTGCAGAAAAAGCTCTTTTCAGGTAAA
ATAGACGTTTTGTTGTACTTGTGCCTGTTTAGTTTTTTATTGCTGCCTCC
CGAAGTTTTAGATACAAACTTGTCGAGAATAACCGAATAACAGTTTTTGT
CTTCGTTCCCGAAATATTTGTACATTTGACGATATGTAAAATAACAAAGA
ACAATATTGAATTATAGTAATTTCAGTAAATAGTGAATTTAGAGCTTTTT
CTTTTTGGATACAAGAATAAATGTCAAGAAATGTTTTGATTTGACAGAAT
TTTTGCGGAATACTTTTAAGAATGTGTTATATTTTACTATTTTTTAGAGC
TTTGAAGACAAAAGGGAAAACACCAAAATACGGATTGATTTTCCATTCAT
CGTTCATTGGGCGGGCTGGTGCCAAGAACAAGGGACGAATTTCCAGATAT
CTTGCTAATAAATGCTCCATTGCTTCAAGAATCGATTGTTTCACGGGTAA
CGCTGTTTAAAAATTTACAGATTTCACAGCCCAGTTGAATTTTAAAATGT
TTCCCACTTGAATGTGTTGAATAGTCATATCTTTCTATTCCAAACCTCAA
TTATCGAATCTTATATGAAATTAGTCAAAAAAGGCCTCATCTCGCGAAAA
TAAGTCCCGCGAAAATTAGATTATTTCGCGAAAAAATTGCCTCGCGAAAA
TAGCTTTCCGTGAAAATTATTTCCCTTAAGGTAAACTTGTAGTCACCTTC
AGCCCCTCGAAAAGCCTGGGAAAAGAGCGTCCTCTAATCAAAAGAAGGTT
CTTCAACCCCAGAATATCGAATTAGAGAAAGAATCAACTGTGGTAGGTGT
TGCGAAGAAAAAATTAAATTCCACTAATGTTTTTGTCTTTCTTTACGGAT
AGAAAGCCCCTCAAATTTGTTCGGAAAGAAGATGCACGAGCAGGTGGACG
ATCGATTGAAATTCTACGAGACCGGAGAAGCACCAATGAAAAACGAAGAT
GCCATGATGGAGGTGTTAGAAGAATTGAAATCATTGGCTGAAGAGACAAC
CGGTTTGACGAACAGTGAGAAGAAGAAGAAAAAGAAAAAGAAGAAGGCTA
AAGAAGAGGATGATGACGAAAATGAGGAACCTGCGCAAGAGGTATTATTT
GTGTTCTTAAGGCTTCATTCCTTAAAAGACTTCATTTAACTTATCGCATA
AAAACTATATCTTTAACTGTTGATCGACAATAACGAGTCTACCGTTAAAA
AAATGTTCCTTAGTTTTTCTCAAAAAATTCCTTGGACAGTACCGTCGCGA
TAAGGTATCACAAAATATTCCCACTGGGAATGAAGTTATCGGTCAATACT
GTGAAACAGTAAATACTCGATAAGCGTCAGAAATTTAGTATTATAAATCA
GTATTTTTACTGAAAGTTCTGATAGATATCAATGTTTCACAGCTTCTTTT
TTCTAAACCTTGTAAACTTTCTTTCTTCCATAGAACGGACACGTCGAGAC
TTCTGAGAAGAAAAAGAAGAAGAAGAAGCGAAAGGCTGAAGAAGTAGAAG
AGGAGGCGGAAGAAGCTGATGAACAGCCTAAGAAGAAGAAAAAGGTGCCT
TTACAAGTATACATAGCCCCGGGATTAAAAATTAAAATAATGAATCCATG
TTTTAACAATCAGGAGTCATGGGATCAGATGGGATCTTTAACATATCATG
GTGGCCAGCGACCCTTGAAATCCTTGAAACCCTTGAAAATGTGATGATTT
TCTGAATACCCTTAAACTATGACATTTACACCCTTGATACCCTTGAGATT
GGTCCTAAAATATGGGTGGCCAGCATGCATAATGCTGCGTGAACACAAGA
TTTTAACAAAAGCTATTGTAGAGGTTTCGGAACTAGTTAGGGCTGTCACG
TATCGATACGTGATATATTGTTACGTTTTGATGACAAAAAAGAATTTACA
ATTTCCCAGTGCTTATGTTTCTTTTCATTGTATCTTTTTCTTACCAACAG
AACAAAGATAAGAGTATGGTTGAGAGTGACGATATAAATACAACCGTTGA
CGAACTCGTCCCTAAAAAGAAGAAAAAGAAGAAGTCAAAAACCGAAAACG
AAGAATAA Coding sequence (CDS) from alignment at sc0000348_pilon:174416..179173- >XLOC_043883 ID=XLOC_043883|Name=XLOC_043883|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3240bp|location=Sequence derived from alignment at sc0000348_pilon:174416..179173- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTTATACAGTTTATTTGAACATGCAGCTGGCTATGCAATCTTTAA
AGTGAATGCAACAGAAGAGATTGGTGCTCTGCTACCTGAAGTACAAGAAT
CAGTCACTGATCTAGAACGTTTTGGAAGATTAGTAAAATTGGTTGCATTT
AGCCCTTTCAAAAATGCTGCAAATGCCTTGGAAAACATAAACAGCATTTC
GGAAGATGGTTTTATACAGTTTATTTGAACATGCAGCTGGCTATGCAATC
TTTAAAGTGAATGCAACAGAAGAGATTGGTGCTCTGCTACCTGAAGTACA
AGAATCAGTCACTGATCTAGAACGTTTTGGAAGATTAGTAAAATTGGTTG
CATTTAGCCCTTTCAAAAATGCTGCAAATGCCTTGGAAAACATAAACAGC
ATTTCGGAAGGGATGGTCCATGAGGATTTAAAGGCATTCTTGGAAGCAAA
CATCCCTACTGGAAAAAAGAAAAGCAAAGTTGCTCTAGGAATTTCTGATG
CAAAGATTGGCGGAGTTATCCAAGAGGCTTGTAATATCCAGTGTGAATAT
GGACAGACCGTTTCAGAAATCTTGAGAGGAGTACGCCTTCATTTTCATAA
AATGATACAAGGGATGGTCCATGAGGATTTAAAGGCATTCTTGGAAGCAA
ACATCCCTACTGGAAAAAAGAAAAGCAAAGTTGCTCTAGGAATTTCTGAT
GCAAAGATTGGCGGAGTTATCCAAGAGGCTTGTAATATCCAGTGTGAATA
TGGACAGACCGTTTCAGAAATCTTGAGAGGAGTACGCCTTCATTTTCATA
AAATGATACAAGGACTAACTGCTGAGACATCTGGCAAAGCACAACTTGGT
CTAGGTCACAGTTACTCCCGTGCTAAAGTCAAGTTTAATGTTCATCGTGT
TGACAACATGATCATCCAGACTATTGCTCTTGTGGATCAATTGGACAAAG
ATATCAACACATTTTCTATGAGAATAAGGACTAACTGCTGAGACATCTGG
CAAAGCACAACTTGGTCTAGGTCACAGTTACTCCCGTGCTAAAGTCAAGT
TTAATGTTCATCGTGTTGACAACATGATCATCCAGACTATTGCTCTTGTG
GATCAATTGGACAAAGATATCAACACATTTTCTATGAGAATAAGAGAATG
GTATTCATACCACTTCCCAGAGTTGGTGAAGATTGTCAACGATAATTACC
TCTATGCCAAATTAGCTCAATACATCAAATCAAGAAAAGAATTGACGGAA
GAAAAACTGGAAGGACTTGAAGAAATCGTTATGGACGAAGCAAAAGCTAA
AGCTATTTATGTTGCTTCAAAGTCATCCATGGAGAATGGTATTCATACCA
CTTCCCAGAGTTGGTGAAGATTGTCAACGATAATTACCTCTATGCCAAAT
TAGCTCAATACATCAAATCAAGAAAAGAATTGACGGAAGAAAAACTGGAA
GGACTTGAAGAAATCGTTATGGACGAAGCAAAAGCTAAAGCTATTTATGT
TGCTTCAAAGTCATCCATGGGTATGGACATTTCACCAATTGATTTGATCA
ATATTGAAAGCTTTGCTAACAGAGTCATTGGTTTGGTAGAATATCGACAA
AAACTCCACGCCTACTTAACATCCAAAATGAACCAAGTCGCTCCAAATTT
GCAAGCTCTTATCGGAGATCTTGTATGGACATTTCACCAATTGATTTGAT
CAATATTGAAAGCTTTGCTAACAGAGTCATTGGTTTGGTAGAATATCGAC
AAAAACTCCACGCCTACTTAACATCCAAAATGAACCAAGTCGCTCCAAAT
TTGCAAGCTCTTATCGGAGATCTTGTTGGTGCTCGTTTGATTGCTCATGC
TGGAAGTTTAACAAACCTTGCAAAATATCCTGCCTCTACTGTTCAAATTC
TTGGTGCAGAAAAAGCTCTTTTCAGGTTGGTGCTCGTTTGATTGCTCATG
CTGGAAGTTTAACAAACCTTGCAAAATATCCTGCCTCTACTGTTCAAATT
CTTGGTGCAGAAAAAGCTCTTTTCAGAGCTTTGAAGACAAAAGGGAAAAC
ACCAAAATACGGATTGATTTTCCATTCATCGTTCATTGGGCGGGCTGGTG
CCAAGAACAAGGGACGAATTTCCAGATATCTTGCTAATAAATGCTCCATT
GCTTCAAGAATCGATTGTTTCACGGAGCTTTGAAGACAAAAGGGAAAACA
CCAAAATACGGATTGATTTTCCATTCATCGTTCATTGGGCGGGCTGGTGC
CAAGAACAAGGGACGAATTTCCAGATATCTTGCTAATAAATGCTCCATTG
CTTCAAGAATCGATTGTTTCACGGAAAGCCCCTCAAATTTGTTCGGAAAG
AAGATGCACGAGCAGGTGGACGATCGATTGAAATTCTACGAGACCGGAGA
AGCACCAATGAAAAACGAAGATGCCATGATGGAGGTGTTAGAAGAATTGA
AATCATTGGCTGAAGAGACAACCGGTTTGACGAACAGTGAGAAGAAGAAG
AAAAAGAAAAAGAAGAAGGCTAAAGAAGAGGATGATGACGAAAATGAGGA
ACCTGCGCAAGAGAAAGCCCCTCAAATTTGTTCGGAAAGAAGATGCACGA
GCAGGTGGACGATCGATTGAAATTCTACGAGACCGGAGAAGCACCAATGA
AAAACGAAGATGCCATGATGGAGGTGTTAGAAGAATTGAAATCATTGGCT
GAAGAGACAACCGGTTTGACGAACAGTGAGAAGAAGAAGAAAAAGAAAAA
GAAGAAGGCTAAAGAAGAGGATGATGACGAAAATGAGGAACCTGCGCAAG
AGAACGGACACGTCGAGACTTCTGAGAAGAAAAAGAAGAAGAAGAAGCGA
AAGGCTGAAGAAGTAGAAGAGGAGGCGGAAGAAGCTGATGAACAGCCTAA
GAAGAAGAAAAAGAACGGACACGTCGAGACTTCTGAGAAGAAAAAGAAGA
AGAAGAAGCGAAAGGCTGAAGAAGTAGAAGAGGAGGCGGAAGAAGCTGAT
GAACAGCCTAAGAAGAAGAAAAAGAACAAAGATAAGAGTATGGTTGAGAG
TGACGATATAAATACAACCGTTGACGAACTCGTCCCTAAAAAGAAGAAAA
AGAAGAAGTCAAAAACCGAAAACGAAGAATAAAACAAAGATAAGAGTATG
GTTGAGAGTGACGATATAAATACAACCGTTGACGAACTCGTCCCTAAAAA
GAAGAAAAAGAAGAAGTCAAAAACCGAAAACGAAGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348_pilon | genome | sc0000348_pilon:174416..179173 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1513-1620:109 |
| Aaloc | 1402-1512:626 |
| Aaloc | 1165-1401:1205 |
| Aaloc | 1015-1161:1761 |
| Aaloc | 913-1011:2165 |
| Aaloc | 763-912:2672 |
| Aaloc | 574-759:3145 |
| Aaloc | 409-570:3584 |
| Aaloc | 208-405:3926 |
| Aaloc | 1-204:4759 |
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